RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 NUP153P49790 1475 aaKnown RBP33.86■■■■□ 3.01
FOXA3-201ENST00000302177 CLASP1Q7Z460 1538 aa33.85■■■■□ 3.01
FOXA3-201ENST00000302177 KDM6BO15054 1643 aa33.85■■■■□ 3.01
FOXA3-201ENST00000302177 DAPK1P53355 1430 aa33.85■■■■□ 3.01
FOXA3-201ENST00000302177 NUP160Q12769 1436 aa33.84■■■■□ 3.01
FOXA3-201ENST00000302177 DNMT1P26358 1616 aaKnown RBP33.84■■■■□ 3.01
FOXA3-201ENST00000302177 ABCC5O15440 1437 aa33.78■■■■□ 3
FOXA3-201ENST00000302177 MYT1Q01538 1121 aa33.72■■■□□ 2.99
FOXA3-201ENST00000302177 RIMBP3CA6NJZ7 1639 aa33.71■■■□□ 2.99
FOXA3-201ENST00000302177 RIMBP3BA6NNM3 1639 aa33.71■■■□□ 2.99
FOXA3-201ENST00000302177 RIMBP3Q9UFD9 1639 aa33.71■■■□□ 2.99
FOXA3-201ENST00000302177 TROQ12816 1431 aaPredicted RBP33.7■■■□□ 2.99
FOXA3-201ENST00000302177 ANKRD30BQ9BXX2 1392 aa33.7■■■□□ 2.98
FOXA3-201ENST00000302177 EIF4G2P78344 907 aaKnown RBP eCLIP33.69■■■□□ 2.98
FOXA3-201ENST00000302177 ARID3CA6NKF2 412 aa33.69■■■□□ 2.98
FOXA3-201ENST00000302177 HSPA5P11021 654 aaKnown RBP33.68■■■□□ 2.98
FOXA3-201ENST00000302177 RPRD2Q5VT52 1461 aaKnown RBP33.67■■■□□ 2.98
FOXA3-201ENST00000302177 L3MBTL2Q969R5 705 aa33.65■■■□□ 2.98
FOXA3-201ENST00000302177 JPH4Q96JJ6 628 aa33.64■■■□□ 2.98
FOXA3-201ENST00000302177 ITSN2Q9NZM3 1697 aa33.63■■■□□ 2.97
FOXA3-201ENST00000302177 WASHC2AQ641Q2 1341 aa33.62■■■□□ 2.97
FOXA3-201ENST00000302177 ADCY10Q96PN6 1610 aa33.62■■■□□ 2.97
FOXA3-201ENST00000302177 CYB5RLQ6IPT4 315 aa33.6■■■□□ 2.97
FOXA3-201ENST00000302177 CARMIL2Q6F5E8 1435 aa33.59■■■□□ 2.97
FOXA3-201ENST00000302177 ZNF644Q9H582 1327 aaPredicted RBP33.59■■■□□ 2.97
FOXA3-201ENST00000302177 PRG4Q92954 1404 aaPredicted RBP33.57■■■□□ 2.96
FOXA3-201ENST00000302177 CAMSAP2Q08AD1 1489 aa33.56■■■□□ 2.96
FOXA3-201ENST00000302177 ERCC6L2Q5T890 1561 aa33.56■■■□□ 2.96
FOXA3-201ENST00000302177 GPATCH8Q9UKJ3 1502 aaKnown RBP33.55■■■□□ 2.96
FOXA3-201ENST00000302177 TEX14Q8IWB6 1497 aa33.55■■■□□ 2.96
FOXA3-201ENST00000302177 ADGRL2O95490 1459 aa33.54■■■□□ 2.96
FOXA3-201ENST00000302177 CFDP1Q9UEE9 299 aaPredicted RBP33.54■■■□□ 2.96
FOXA3-201ENST00000302177 NCOA1Q15788 1441 aa33.52■■■□□ 2.96
FOXA3-201ENST00000302177 FKBP8Q14318 412 aa33.52■■■□□ 2.96
FOXA3-201ENST00000302177 ADGBQ8N7X0 1667 aa33.52■■■□□ 2.96
FOXA3-201ENST00000302177 NEFLP07196 543 aa33.52■■■□□ 2.96
FOXA3-201ENST00000302177 SLC4A1APQ9BWU0 796 aaKnown RBP33.52■■■□□ 2.96
FOXA3-201ENST00000302177 PLB1Q6P1J6 1458 aa33.52■■■□□ 2.96
FOXA3-201ENST00000302177 CNTLNQ9NXG0 1405 aa33.51■■■□□ 2.95
FOXA3-201ENST00000302177 SHROOM2Q13796 1616 aa33.51■■■□□ 2.95
FOXA3-201ENST00000302177 FOXD1Q16676 465 aa33.49■■■□□ 2.95
FOXA3-201ENST00000302177 PZPP20742 1482 aa33.47■■■□□ 2.95
FOXA3-201ENST00000302177 TSHZ2Q9NRE2 1034 aa33.45■■■□□ 2.95
FOXA3-201ENST00000302177 CROCC2H7BZ55 1655 aa33.44■■■□□ 2.94
FOXA3-201ENST00000302177 CCDC7Q96M83 1385 aa33.44■■■□□ 2.94
FOXA3-201ENST00000302177 SPATA31E1Q6ZUB1 1445 aa33.42■■■□□ 2.94
FOXA3-201ENST00000302177 KIF14Q15058 1648 aa33.42■■■□□ 2.94
FOXA3-201ENST00000302177 NBPF8Q3BBV2 869 aa33.41■■■□□ 2.94
FOXA3-201ENST00000302177 ANKRD30AQ9BXX3 1397 aa33.4■■■□□ 2.94
FOXA3-201ENST00000302177 ABCA8O94911 1581 aa33.39■■■□□ 2.94
FOXA3-201ENST00000302177 KIAA1107Q9UPP5 1409 aa33.37■■■□□ 2.93
FOXA3-201ENST00000302177 POLR1AO95602 1720 aaPredicted RBP33.35■■■□□ 2.93
FOXA3-201ENST00000302177 PLEKHD1A6NEE1 506 aa33.34■■■□□ 2.93
FOXA3-201ENST00000302177 SHANK2Q9UPX8 1470 aa33.34■■■□□ 2.93
FOXA3-201ENST00000302177 C11orf95C9JLR9 678 aaPredicted RBP33.32■■■□□ 2.93
FOXA3-201ENST00000302177 ABCC10Q5T3U5 1492 aa33.31■■■□□ 2.92
FOXA3-201ENST00000302177 MBD5Q9P267 1494 aa33.31■■■□□ 2.92
FOXA3-201ENST00000302177 HNRNPUQ00839 825 aaKnown RBP eCLIP33.3■■■□□ 2.928e-7■□□□□ 9.3
FOXA3-201ENST00000302177 PRKRIP1Q9H875 184 aaPredicted RBP33.29■■■□□ 2.92
FOXA3-201ENST00000302177 ATP10BO94823 1461 aa33.28■■■□□ 2.92
FOXA3-201ENST00000302177 BCANQ96GW7 911 aa33.28■■■□□ 2.92
FOXA3-201ENST00000302177 ANKRD50Q9ULJ7 1429 aa33.28■■■□□ 2.92
FOXA3-201ENST00000302177 ZNF777Q9ULD5 760 aaPredicted RBP33.27■■■□□ 2.92
FOXA3-201ENST00000302177 CDC42BPAQ5VT25 1732 aa33.26■■■□□ 2.92
FOXA3-201ENST00000302177 KIF7Q2M1P5 1343 aa33.23■■■□□ 2.91
FOXA3-201ENST00000302177 PKD2Q13563 968 aa33.2■■■□□ 2.91
FOXA3-201ENST00000302177 KDM5DQ9BY66 1539 aa33.2■■■□□ 2.91
FOXA3-201ENST00000302177 ARID4BQ4LE39 1312 aaPredicted RBP33.19■■■□□ 2.9
FOXA3-201ENST00000302177 C9orf84Q5VXU9 1444 aa33.18■■■□□ 2.9
FOXA3-201ENST00000302177 ARHGEF5Q12774 1597 aa33.16■■■□□ 2.9
FOXA3-201ENST00000302177 UHRF1BP1Q6BDS2 1440 aa33.16■■■□□ 2.9
FOXA3-201ENST00000302177 ERICH6BQ5W0A0 696 aa33.15■■■□□ 2.9
FOXA3-201ENST00000302177 TSPY4P0CV99 314 aa33.14■■■□□ 2.9
FOXA3-201ENST00000302177 TSPY10P0CW01 314 aa33.14■■■□□ 2.9
FOXA3-201ENST00000302177 PTPRGP23470 1445 aa33.13■■■□□ 2.89
FOXA3-201ENST00000302177 ARHGEF12Q9NZN5 1544 aa33.11■■■□□ 2.89
FOXA3-201ENST00000302177 CCDC184Q52MB2 194 aa33.09■■■□□ 2.89
FOXA3-201ENST00000302177 NUP155O75694 1391 aa33.09■■■□□ 2.89
FOXA3-201ENST00000302177 RSPH4AQ5TD94 716 aa33.09■■■□□ 2.89
FOXA3-201ENST00000302177 USP47Q96K76 1375 aa33.08■■■□□ 2.89
FOXA3-201ENST00000302177 MRS2Q9HD23 443 aa33.08■■■□□ 2.89
FOXA3-201ENST00000302177 KDM5CP41229 1560 aa33.05■■■□□ 2.88
FOXA3-201ENST00000302177 ZBED9Q6R2W3 1325 aa33.05■■■□□ 2.88
FOXA3-201ENST00000302177 RALGAPBQ86X10 1494 aa33.05■■■□□ 2.88
FOXA3-201ENST00000302177 KIF15Q9NS87 1388 aa33.01■■■□□ 2.87
FOXA3-201ENST00000302177 ROCK2O75116 1388 aaKnown RBP33■■■□□ 2.87
FOXA3-201ENST00000302177 DHX29Q7Z478 1369 aaKnown RBP33■■■□□ 2.87
FOXA3-201ENST00000302177 BCORL1Q5H9F3 1711 aa32.98■■■□□ 2.87
FOXA3-201ENST00000302177 CCDC141Q6ZP82 1450 aa32.97■■■□□ 2.87
FOXA3-201ENST00000302177 PREX2Q70Z35 1606 aa32.96■■■□□ 2.87
FOXA3-201ENST00000302177 FAM9BQ8IZU0 186 aa32.96■■■□□ 2.87
FOXA3-201ENST00000302177 HNRNPMP52272 730 aaKnown RBP eCLIP32.94■■■□□ 2.86
FOXA3-201ENST00000302177 SAMD9LQ8IVG5 1584 aa32.92■■■□□ 2.86
FOXA3-201ENST00000302177 CDC42BPBQ9Y5S2 1711 aa32.91■■■□□ 2.86
FOXA3-201ENST00000302177 ZNF326Q5BKZ1 582 aaKnown RBP32.89■■■□□ 2.86
FOXA3-201ENST00000302177 MAST1Q9Y2H9 1570 aa32.88■■■□□ 2.85
FOXA3-201ENST00000302177 NPM1P06748 294 aaKnown RBP eCLIP32.87■■■□□ 2.85
FOXA3-201ENST00000302177 RBM19Q9Y4C8 960 aaKnown RBP32.87■■■□□ 2.85
FOXA3-201ENST00000302177 CARD11Q9BXL7 1154 aa32.86■■■□□ 2.85
FOXA3-201ENST00000302177 TRHP20396 242 aaPredicted RBP32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms