RNA–Protein interactions for RNA: ENST00000296140.3

CCR1-201, Transcript of C-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR1, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1-201ENST00000296140 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
CCR1-201ENST00000296140 ZNF644Q9H582 1327 aaPredicted RBP13.31□□□□□ -0.28
CCR1-201ENST00000296140 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
CCR1-201ENST00000296140 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
CCR1-201ENST00000296140 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
CCR1-201ENST00000296140 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
CCR1-201ENST00000296140 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
CCR1-201ENST00000296140 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
CCR1-201ENST00000296140 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
CCR1-201ENST00000296140 KIF7Q2M1P5 1343 aa13.27□□□□□ -0.28
CCR1-201ENST00000296140 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.28
CCR1-201ENST00000296140 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.29
CCR1-201ENST00000296140 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
CCR1-201ENST00000296140 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
CCR1-201ENST00000296140 WDR62O43379 1518 aa13.25□□□□□ -0.29
CCR1-201ENST00000296140 MIA2Q96PC5 1412 aa13.25□□□□□ -0.29
CCR1-201ENST00000296140 IQGAP2Q13576 1575 aa13.25□□□□□ -0.29
CCR1-201ENST00000296140 PPP4R2Q9NY27 417 aa13.25□□□□□ -0.29
CCR1-201ENST00000296140 DAPK1P53355 1430 aa13.25□□□□□ -0.29
CCR1-201ENST00000296140 RPRD2Q5VT52 1461 aaKnown RBP13.25□□□□□ -0.29
CCR1-201ENST00000296140 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
CCR1-201ENST00000296140 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
CCR1-201ENST00000296140 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
CCR1-201ENST00000296140 ABCC5O15440 1437 aa13.24□□□□□ -0.29
CCR1-201ENST00000296140 KCNA4P22459 653 aa13.24□□□□□ -0.29
CCR1-201ENST00000296140 SPATA31E1Q6ZUB1 1445 aa13.23□□□□□ -0.29
CCR1-201ENST00000296140 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
CCR1-201ENST00000296140 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
CCR1-201ENST00000296140 ZNF326Q5BKZ1 582 aaKnown RBP13.21□□□□□ -0.29
CCR1-201ENST00000296140 PBRM1Q86U86 1689 aa13.21□□□□□ -0.3
CCR1-201ENST00000296140 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
CCR1-201ENST00000296140 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
CCR1-201ENST00000296140 DNMT1P26358 1616 aaKnown RBP13.17□□□□□ -0.3
CCR1-201ENST00000296140 ROCK1Q13464 1354 aa13.17□□□□□ -0.3
CCR1-201ENST00000296140 ERICH6Q7L0X2 663 aa13.17□□□□□ -0.3
CCR1-201ENST00000296140 PZPP20742 1482 aa13.17□□□□□ -0.3
CCR1-201ENST00000296140 NUP153P49790 1475 aaKnown RBP13.17□□□□□ -0.3
CCR1-201ENST00000296140 DHX29Q7Z478 1369 aaKnown RBP13.17□□□□□ -0.3
CCR1-201ENST00000296140 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
CCR1-201ENST00000296140 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
CCR1-201ENST00000296140 ZNF777Q9ULD5 760 aaPredicted RBP13.15□□□□□ -0.3
CCR1-201ENST00000296140 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.31
CCR1-201ENST00000296140 DISP1Q96F81 1524 aa13.14□□□□□ -0.31
CCR1-201ENST00000296140 BCORL1Q5H9F3 1711 aa13.14□□□□□ -0.31
CCR1-201ENST00000296140 USP47Q96K76 1375 aa13.13□□□□□ -0.31
CCR1-201ENST00000296140 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
CCR1-201ENST00000296140 PKD2Q13563 968 aa13.12□□□□□ -0.31
CCR1-201ENST00000296140 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
CCR1-201ENST00000296140 CFDP1Q9UEE9 299 aaPredicted RBP13.11□□□□□ -0.31
CCR1-201ENST00000296140 CAMSAP2Q08AD1 1489 aa13.1□□□□□ -0.31
CCR1-201ENST00000296140 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
CCR1-201ENST00000296140 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
CCR1-201ENST00000296140 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
CCR1-201ENST00000296140 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
CCR1-201ENST00000296140 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
CCR1-201ENST00000296140 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.32
CCR1-201ENST00000296140 PLB1Q6P1J6 1458 aa13.08□□□□□ -0.32
CCR1-201ENST00000296140 KIAA0586Q9BVV6 1533 aa13.07□□□□□ -0.32
CCR1-201ENST00000296140 KIF14Q15058 1648 aa13.07□□□□□ -0.32
CCR1-201ENST00000296140 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
CCR1-201ENST00000296140 TROQ12816 1431 aaPredicted RBP13.06□□□□□ -0.32
CCR1-201ENST00000296140 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
CCR1-201ENST00000296140 KDM5CP41229 1560 aa13.05□□□□□ -0.32
CCR1-201ENST00000296140 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
CCR1-201ENST00000296140 KDM2AQ9Y2K7 1162 aa13.05□□□□□ -0.32
CCR1-201ENST00000296140 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
CCR1-201ENST00000296140 RNF123Q5XPI4 1314 aa13.04□□□□□ -0.32
CCR1-201ENST00000296140 NBR1Q14596 966 aa13.04□□□□□ -0.32
CCR1-201ENST00000296140 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
CCR1-201ENST00000296140 TMC1Q8TDI8 760 aa13.03□□□□□ -0.32
CCR1-201ENST00000296140 GRIN2AQ12879 1464 aa13.02□□□□□ -0.32
CCR1-201ENST00000296140 NOP58Q9Y2X3 529 aaKnown RBP13.02□□□□□ -0.32
CCR1-201ENST00000296140 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.32
CCR1-201ENST00000296140 ANKRD50Q9ULJ7 1429 aa13.02□□□□□ -0.33
CCR1-201ENST00000296140 ST20-MTHFSA0A0A6YYL1 179 aa13.02□□□□□ -0.33
CCR1-201ENST00000296140 NUP155O75694 1391 aa13.01□□□□□ -0.33
CCR1-201ENST00000296140 ADGBQ8N7X0 1667 aa13□□□□□ -0.33
CCR1-201ENST00000296140 ADGRL2O95490 1459 aa13□□□□□ -0.33
CCR1-201ENST00000296140 ANKRD30AQ9BXX3 1397 aa13□□□□□ -0.33
CCR1-201ENST00000296140 DEKP35659 375 aaKnown RBP12.99□□□□□ -0.33
CCR1-201ENST00000296140 FBLN2P98095 1184 aa12.99□□□□□ -0.33
CCR1-201ENST00000296140 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
CCR1-201ENST00000296140 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
CCR1-201ENST00000296140 CROCC2H7BZ55 1655 aa12.98□□□□□ -0.33
CCR1-201ENST00000296140 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
CCR1-201ENST00000296140 ITSN2Q9NZM3 1697 aa12.97□□□□□ -0.33
CCR1-201ENST00000296140 UHRF1BP1Q6BDS2 1440 aa12.97□□□□□ -0.33
CCR1-201ENST00000296140 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
CCR1-201ENST00000296140 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
CCR1-201ENST00000296140 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
CCR1-201ENST00000296140 LRPPRCP42704 1394 aaKnown RBP12.96□□□□□ -0.33
CCR1-201ENST00000296140 KIF15Q9NS87 1388 aa12.96□□□□□ -0.33
CCR1-201ENST00000296140 CEP170Q5SW79 1584 aa12.96□□□□□ -0.34
CCR1-201ENST00000296140 C9orf84Q5VXU9 1444 aa12.95□□□□□ -0.34
CCR1-201ENST00000296140 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
CCR1-201ENST00000296140 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■■■□ 22.6
CCR1-201ENST00000296140 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
CCR1-201ENST00000296140 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
CCR1-201ENST00000296140 MYBBP1AQ9BQG0 1328 aaKnown RBP12.94□□□□□ -0.34
CCR1-201ENST00000296140 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms