RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
ERCC3-201ENST00000285398 SUPT6HQ7KZ85 1726 aaKnown RBP14.95□□□□□ -0.02
ERCC3-201ENST00000285398 UHRF1BP1LA0JNW5 1464 aa14.95□□□□□ -0.02
ERCC3-201ENST00000285398 FGD6Q6ZV73 1430 aa14.95□□□□□ -0.02
ERCC3-201ENST00000285398 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
ERCC3-201ENST00000285398 KDM5BQ9UGL1 1544 aa14.93□□□□□ -0.02
ERCC3-201ENST00000285398 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
ERCC3-201ENST00000285398 CFDP1Q9UEE9 299 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-201ENST00000285398 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
ERCC3-201ENST00000285398 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
ERCC3-201ENST00000285398 GPATCH8Q9UKJ3 1502 aaKnown RBP14.87□□□□□ -0.03
ERCC3-201ENST00000285398 RBM19Q9Y4C8 960 aaKnown RBP14.87□□□□□ -0.03
ERCC3-201ENST00000285398 PTPRKQ15262 1439 aa14.86□□□□□ -0.03
ERCC3-201ENST00000285398 FKBP8Q14318 412 aa14.85□□□□□ -0.03
ERCC3-201ENST00000285398 BCANQ96GW7 911 aa14.85□□□□□ -0.03
ERCC3-201ENST00000285398 ASXL2Q76L83 1435 aa14.85□□□□□ -0.03
ERCC3-201ENST00000285398 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
ERCC3-201ENST00000285398 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
ERCC3-201ENST00000285398 RRP7BPQ9NSQ0 103 aa14.83□□□□□ -0.04
ERCC3-201ENST00000285398 TTC37Q6PGP7 1564 aa14.83□□□□□ -0.04
ERCC3-201ENST00000285398 NEFLP07196 543 aa14.82□□□□□ -0.04
ERCC3-201ENST00000285398 HNRNPMP52272 730 aaKnown RBP eCLIP14.82□□□□□ -0.042e-6■■■■□ 23.4
ERCC3-201ENST00000285398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
ERCC3-201ENST00000285398 WDR7Q9Y4E6 1490 aa14.81□□□□□ -0.04
ERCC3-201ENST00000285398 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
ERCC3-201ENST00000285398 CAMSAP2Q08AD1 1489 aa14.78□□□□□ -0.04
ERCC3-201ENST00000285398 CDC42BPAQ5VT25 1732 aa14.78□□□□□ -0.04
ERCC3-201ENST00000285398 ARHGAP5Q13017 1502 aa14.76□□□□□ -0.05
ERCC3-201ENST00000285398 TCOF1Q13428 1488 aaKnown RBP14.75□□□□□ -0.05
ERCC3-201ENST00000285398 RAB3GAP2Q9H2M9 1393 aa14.75□□□□□ -0.05
ERCC3-201ENST00000285398 ABCC5O15440 1437 aa14.75□□□□□ -0.05
ERCC3-201ENST00000285398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
ERCC3-201ENST00000285398 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
ERCC3-201ENST00000285398 MAPKBP1O60336 1514 aa14.74□□□□□ -0.05
ERCC3-201ENST00000285398 DAPK1P53355 1430 aa14.73□□□□□ -0.05
ERCC3-201ENST00000285398 ITSN2Q9NZM3 1697 aa14.73□□□□□ -0.05
ERCC3-201ENST00000285398 CDC42BPBQ9Y5S2 1711 aa14.73□□□□□ -0.05
ERCC3-201ENST00000285398 PLCH2O75038 1416 aa14.71□□□□□ -0.05
ERCC3-201ENST00000285398 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.06
ERCC3-201ENST00000285398 EFCAB2Q5VUJ9 269 aa14.71□□□□□ -0.06
ERCC3-201ENST00000285398 SETD5Q9C0A6 1442 aa14.7□□□□□ -0.06
ERCC3-201ENST00000285398 PREX2Q70Z35 1606 aa14.7□□□□□ -0.06
ERCC3-201ENST00000285398 SAMD9LQ8IVG5 1584 aa14.7□□□□□ -0.06
ERCC3-201ENST00000285398 AFAP1Q8N556 730 aa14.7□□□□□ -0.06
ERCC3-201ENST00000285398 MYT1LQ9UL68 1186 aa14.7□□□□□ -0.06
ERCC3-201ENST00000285398 DNAJC5Q9H3Z4 198 aa14.69□□□□□ -0.06
ERCC3-201ENST00000285398 FANCIQ9NVI1 1328 aa14.69□□□□□ -0.06
ERCC3-201ENST00000285398 SYCP2Q9BX26 1530 aa14.69□□□□□ -0.06
ERCC3-201ENST00000285398 MYO5CQ9NQX4 1742 aa14.68□□□□□ -0.06
ERCC3-201ENST00000285398 MSH5O43196 834 aa14.68□□□□□ -0.06
ERCC3-201ENST00000285398 ARHGEF12Q9NZN5 1544 aa14.68□□□□□ -0.06
ERCC3-201ENST00000285398 NAIPQ13075 1403 aa14.68□□□□□ -0.06
ERCC3-201ENST00000285398 CD109Q6YHK3 1445 aa14.67□□□□□ -0.06
ERCC3-201ENST00000285398 TSPY4P0CV99 314 aa14.67□□□□□ -0.06
ERCC3-201ENST00000285398 TSPY10P0CW01 314 aa14.67□□□□□ -0.06
ERCC3-201ENST00000285398 ABCA9Q8IUA7 1624 aa14.67□□□□□ -0.06
ERCC3-201ENST00000285398 MBD5Q9P267 1494 aa14.67□□□□□ -0.06
ERCC3-201ENST00000285398 FANCAO15360 1455 aa14.66□□□□□ -0.06
ERCC3-201ENST00000285398 DNMT1P26358 1616 aaKnown RBP14.65□□□□□ -0.06
ERCC3-201ENST00000285398 HFM1A2PYH4 1435 aa14.65□□□□□ -0.06
ERCC3-201ENST00000285398 TRAPPC8Q9Y2L5 1435 aa14.65□□□□□ -0.06
ERCC3-201ENST00000285398 TRIM52Q96A61 297 aa14.64□□□□□ -0.07
ERCC3-201ENST00000285398 KDM6BO15054 1643 aa14.64□□□□□ -0.07
ERCC3-201ENST00000285398 CCER2I3L3R5 266 aa14.63□□□□□ -0.07
ERCC3-201ENST00000285398 C9orf84Q5VXU9 1444 aa14.63□□□□□ -0.07
ERCC3-201ENST00000285398 AKNAQ7Z591 1439 aa14.63□□□□□ -0.07
ERCC3-201ENST00000285398 PPP1R15AO75807 674 aaPredicted RBP14.62□□□□□ -0.07
ERCC3-201ENST00000285398 DDX10Q13206 875 aaKnown RBP14.62□□□□□ -0.07
ERCC3-201ENST00000285398 NCOA1Q15788 1441 aa14.62□□□□□ -0.07
ERCC3-201ENST00000285398 RAPGEF3O95398 923 aa14.62□□□□□ -0.07
ERCC3-201ENST00000285398 SCAPERQ9BY12 1400 aa14.61□□□□□ -0.07
ERCC3-201ENST00000285398 CCDC141Q6ZP82 1450 aa14.6□□□□□ -0.07
ERCC3-201ENST00000285398 ADGRL1O94910 1474 aa14.6□□□□□ -0.07
ERCC3-201ENST00000285398 FOXD1Q16676 465 aa14.59□□□□□ -0.07
ERCC3-201ENST00000285398 DIP2BQ9P265 1576 aa14.58□□□□□ -0.07
ERCC3-201ENST00000285398 ANKRD30AQ9BXX3 1397 aa14.58□□□□□ -0.07
ERCC3-201ENST00000285398 KIF15Q9NS87 1388 aa14.58□□□□□ -0.08
ERCC3-201ENST00000285398 ABCC1P33527 1531 aa14.57□□□□□ -0.08
ERCC3-201ENST00000285398 ARAP3Q8WWN8 1544 aa14.57□□□□□ -0.08
ERCC3-201ENST00000285398 KIAA1107Q9UPP5 1409 aa14.57□□□□□ -0.08
ERCC3-201ENST00000285398 RTN4Q9NQC3 1192 aaKnown RBP14.57□□□□□ -0.08
ERCC3-201ENST00000285398 TIMELESSQ9UNS1 1208 aa14.57□□□□□ -0.08
ERCC3-201ENST00000285398 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
ERCC3-201ENST00000285398 ANP32CO43423 234 aa14.56□□□□□ -0.08
ERCC3-201ENST00000285398 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-201ENST00000285398 TSPOAP1O95153 1857 aa14.56□□□□□ -0.08
ERCC3-201ENST00000285398 ROCK1Q13464 1354 aa14.56□□□□□ -0.08
ERCC3-201ENST00000285398 ARHGEF5Q12774 1597 aa14.55□□□□□ -0.08
ERCC3-201ENST00000285398 SIN3AQ96ST3 1273 aa14.55□□□□□ -0.08
ERCC3-201ENST00000285398 CROCC2H7BZ55 1655 aa14.55□□□□□ -0.08
ERCC3-201ENST00000285398 PLEKHH2Q8IVE3 1493 aa14.55□□□□□ -0.08
ERCC3-201ENST00000285398 RSPH4AQ5TD94 716 aa14.55□□□□□ -0.08
ERCC3-201ENST00000285398 MAP3K4Q9Y6R4 1608 aa14.55□□□□□ -0.08
ERCC3-201ENST00000285398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.081e-11■■■■□ 21.4
ERCC3-201ENST00000285398 ANKRD50Q9ULJ7 1429 aa14.54□□□□□ -0.08
ERCC3-201ENST00000285398 GLI2P10070 1586 aa14.54□□□□□ -0.08
ERCC3-201ENST00000285398 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
ERCC3-201ENST00000285398 ADGRL2O95490 1459 aa14.52□□□□□ -0.09
ERCC3-201ENST00000285398 SHANK2Q9UPX8 1470 aa14.51□□□□□ -0.09
ERCC3-201ENST00000285398 KIF13AQ9H1H9 1805 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms