RNA–Protein interactions for RNA: ENST00000269471.9

MBD1-202, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MBD1, Length 2,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-202ENST00000269471 HFM1A2PYH4 1435 aa23.14■■□□□ 1.29
MBD1-202ENST00000269471 TCOF1Q13428 1488 aaKnown RBP23.13■■□□□ 1.29
MBD1-202ENST00000269471 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
MBD1-202ENST00000269471 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
MBD1-202ENST00000269471 ABCC5O15440 1437 aa23.08■■□□□ 1.28
MBD1-202ENST00000269471 FOXD1Q16676 465 aa23.07■■□□□ 1.28
MBD1-202ENST00000269471 CLASP1Q7Z460 1538 aa23.07■■□□□ 1.28
MBD1-202ENST00000269471 DAPK1P53355 1430 aa23.07■■□□□ 1.28
MBD1-202ENST00000269471 SUPT16HQ9Y5B9 1047 aaKnown RBP23.06■■□□□ 1.28
MBD1-202ENST00000269471 KDM6BO15054 1643 aa23.06■■□□□ 1.28
MBD1-202ENST00000269471 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
MBD1-202ENST00000269471 CAMSAP2Q08AD1 1489 aa23.04■■□□□ 1.28
MBD1-202ENST00000269471 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
MBD1-202ENST00000269471 ABCC10Q5T3U5 1492 aa22.98■■□□□ 1.27
MBD1-202ENST00000269471 ABCC2Q92887 1545 aa22.96■■□□□ 1.27
MBD1-202ENST00000269471 ADCY10Q96PN6 1610 aa22.94■■□□□ 1.26
MBD1-202ENST00000269471 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
MBD1-202ENST00000269471 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
MBD1-202ENST00000269471 CDC42BPAQ5VT25 1732 aa22.93■■□□□ 1.26
MBD1-202ENST00000269471 HIRIP3Q9BW71 556 aaPredicted RBP22.92■■□□□ 1.26
MBD1-202ENST00000269471 ITSN2Q9NZM3 1697 aa22.91■■□□□ 1.26
MBD1-202ENST00000269471 AKNAQ7Z591 1439 aa22.9■■□□□ 1.26
MBD1-202ENST00000269471 TSPY4P0CV99 314 aa22.89■■□□□ 1.26
MBD1-202ENST00000269471 TSPY10P0CW01 314 aa22.89■■□□□ 1.26
MBD1-202ENST00000269471 TSHZ2Q9NRE2 1034 aa22.89■■□□□ 1.25
MBD1-202ENST00000269471 NCOA1Q15788 1441 aa22.87■■□□□ 1.25
MBD1-202ENST00000269471 SLC4A1APQ9BWU0 796 aaKnown RBP22.87■■□□□ 1.25
MBD1-202ENST00000269471 TTC37Q6PGP7 1564 aa22.86■■□□□ 1.25
MBD1-202ENST00000269471 DENND4BO75064 1496 aaPredicted RBP22.86■■□□□ 1.25
MBD1-202ENST00000269471 ROCK1Q13464 1354 aa22.85■■□□□ 1.25
MBD1-202ENST00000269471 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
MBD1-202ENST00000269471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.85■■□□□ 1.25
MBD1-202ENST00000269471 TONSLQ96HA7 1378 aa22.85■■□□□ 1.25
MBD1-202ENST00000269471 ZCCHC11Q5TAX3 1644 aaKnown RBP22.84■■□□□ 1.25
MBD1-202ENST00000269471 ARHGAP5Q13017 1502 aa22.83■■□□□ 1.24
MBD1-202ENST00000269471 PPP1R15AO75807 674 aaPredicted RBP22.81■■□□□ 1.24
MBD1-202ENST00000269471 ANKRD30AQ9BXX3 1397 aa22.81■■□□□ 1.24
MBD1-202ENST00000269471 C9orf84Q5VXU9 1444 aa22.81■■□□□ 1.24
MBD1-202ENST00000269471 CDC42BPBQ9Y5S2 1711 aa22.8■■□□□ 1.24
MBD1-202ENST00000269471 KDM5BQ9UGL1 1544 aa22.79■■□□□ 1.24
MBD1-202ENST00000269471 SAMD9LQ8IVG5 1584 aa22.78■■□□□ 1.24
MBD1-202ENST00000269471 MBD5Q9P267 1494 aa22.77■■□□□ 1.24
MBD1-202ENST00000269471 ANP32EQ9BTT0 268 aa22.77■■□□□ 1.23
MBD1-202ENST00000269471 ANKRD50Q9ULJ7 1429 aa22.75■■□□□ 1.23
MBD1-202ENST00000269471 UHRF1BP1LA0JNW5 1464 aa22.75■■□□□ 1.23
MBD1-202ENST00000269471 SYCP2Q9BX26 1530 aa22.75■■□□□ 1.23
MBD1-202ENST00000269471 KIF15Q9NS87 1388 aa22.73■■□□□ 1.23
MBD1-202ENST00000269471 PREX2Q70Z35 1606 aa22.73■■□□□ 1.23
MBD1-202ENST00000269471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.23
MBD1-202ENST00000269471 BCANQ96GW7 911 aa22.72■■□□□ 1.23
MBD1-202ENST00000269471 PKD2Q13563 968 aa22.72■■□□□ 1.23
MBD1-202ENST00000269471 EFCAB2Q5VUJ9 269 aa22.71■■□□□ 1.23
MBD1-202ENST00000269471 AFAP1Q8N556 730 aa22.71■■□□□ 1.23
MBD1-202ENST00000269471 NUP155O75694 1391 aa22.7■■□□□ 1.23
MBD1-202ENST00000269471 NPM1P06748 294 aaKnown RBP eCLIP22.7■■□□□ 1.22
MBD1-202ENST00000269471 CROCC2H7BZ55 1655 aa22.7■■□□□ 1.22
MBD1-202ENST00000269471 L3MBTL2Q969R5 705 aa22.69■■□□□ 1.22
MBD1-202ENST00000269471 ARHGEF12Q9NZN5 1544 aa22.69■■□□□ 1.22
MBD1-202ENST00000269471 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
MBD1-202ENST00000269471 ADGRL2O95490 1459 aa22.68■■□□□ 1.22
MBD1-202ENST00000269471 CCDC141Q6ZP82 1450 aa22.68■■□□□ 1.22
MBD1-202ENST00000269471 TIMELESSQ9UNS1 1208 aa22.68■■□□□ 1.22
MBD1-202ENST00000269471 PLCH2O75038 1416 aa22.67■■□□□ 1.22
MBD1-202ENST00000269471 MYT1LQ9UL68 1186 aa22.67■■□□□ 1.22
MBD1-202ENST00000269471 ADGBQ8N7X0 1667 aa22.66■■□□□ 1.22
MBD1-202ENST00000269471 PZPP20742 1482 aa22.66■■□□□ 1.22
MBD1-202ENST00000269471 ASXL2Q76L83 1435 aa22.66■■□□□ 1.22
MBD1-202ENST00000269471 MYO5CQ9NQX4 1742 aa22.65■■□□□ 1.22
MBD1-202ENST00000269471 ANKRD30BQ9BXX2 1392 aa22.65■■□□□ 1.22
MBD1-202ENST00000269471 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
MBD1-202ENST00000269471 TRAPPC8Q9Y2L5 1435 aa22.63■■□□□ 1.21
MBD1-202ENST00000269471 RSPH4AQ5TD94 716 aa22.61■■□□□ 1.21
MBD1-202ENST00000269471 SHANK2Q9UPX8 1470 aa22.61■■□□□ 1.21
MBD1-202ENST00000269471 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
MBD1-202ENST00000269471 ZNF326Q5BKZ1 582 aaKnown RBP22.6■■□□□ 1.21
MBD1-202ENST00000269471 ARHGEF5Q12774 1597 aa22.59■■□□□ 1.21
MBD1-202ENST00000269471 BCL11AQ9H165 835 aa22.56■■□□□ 1.2
MBD1-202ENST00000269471 FKBP8Q14318 412 aa22.55■■□□□ 1.2
MBD1-202ENST00000269471 NBPF8Q3BBV2 869 aa22.55■■□□□ 1.2
MBD1-202ENST00000269471 PLEKHH2Q8IVE3 1493 aa22.54■■□□□ 1.2
MBD1-202ENST00000269471 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
MBD1-202ENST00000269471 KIAA1107Q9UPP5 1409 aa22.54■■□□□ 1.2
MBD1-202ENST00000269471 FANCAO15360 1455 aa22.53■■□□□ 1.2
MBD1-202ENST00000269471 RPRD2Q5VT52 1461 aaKnown RBP22.5■■□□□ 1.19
MBD1-202ENST00000269471 KDM2AQ9Y2K7 1162 aa22.5■■□□□ 1.19
MBD1-202ENST00000269471 ABCC1P33527 1531 aa22.48■■□□□ 1.19
MBD1-202ENST00000269471 SCAPERQ9BY12 1400 aa22.48■■□□□ 1.19
MBD1-202ENST00000269471 HSPA5P11021 654 aaKnown RBP22.46■■□□□ 1.19
MBD1-202ENST00000269471 RGL3Q3MIN7 710 aa22.45■■□□□ 1.18
MBD1-202ENST00000269471 ADGRL1O94910 1474 aa22.44■■□□□ 1.18
MBD1-202ENST00000269471 CD109Q6YHK3 1445 aa22.42■■□□□ 1.18
MBD1-202ENST00000269471 FAM135AQ9P2D6 1515 aa22.41■■□□□ 1.18
MBD1-202ENST00000269471 TEX14Q8IWB6 1497 aa22.41■■□□□ 1.18
MBD1-202ENST00000269471 ABCA9Q8IUA7 1624 aa22.41■■□□□ 1.18
MBD1-202ENST00000269471 KIF3BO15066 747 aa22.39■■□□□ 1.18
MBD1-202ENST00000269471 RAPGEF3O95398 923 aa22.39■■□□□ 1.17
MBD1-202ENST00000269471 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
MBD1-202ENST00000269471 MAST1Q9Y2H9 1570 aa22.38■■□□□ 1.17
MBD1-202ENST00000269471 RBM19Q9Y4C8 960 aaKnown RBP22.38■■□□□ 1.17
MBD1-202ENST00000269471 EIF4G2P78344 907 aaKnown RBP eCLIP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms