RNA–Protein interactions for RNA: ENST00000269080.6

ABCA8-201, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best) BASIC

Gene ABCA8, Length 5,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-201ENST00000269080 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
ABCA8-201ENST00000269080 RRP7BPQ9NSQ0 103 aa13.3□□□□□ -0.28
ABCA8-201ENST00000269080 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
ABCA8-201ENST00000269080 USP35Q9P2H5 1018 aa13.29□□□□□ -0.28
ABCA8-201ENST00000269080 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
ABCA8-201ENST00000269080 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.28
ABCA8-201ENST00000269080 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
ABCA8-201ENST00000269080 RGL3Q3MIN7 710 aa13.26□□□□□ -0.29
ABCA8-201ENST00000269080 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
ABCA8-201ENST00000269080 GOLGA6L3A6NEY3 463 aa13.25□□□□□ -0.29
ABCA8-201ENST00000269080 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
ABCA8-201ENST00000269080 PKNOX2Q96KN3 472 aa13.24□□□□□ -0.29
ABCA8-201ENST00000269080 CCNB3Q8WWL7 1395 aa13.24□□□□□ -0.29
ABCA8-201ENST00000269080 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
ABCA8-201ENST00000269080 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
ABCA8-201ENST00000269080 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.29
ABCA8-201ENST00000269080 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
ABCA8-201ENST00000269080 GBP4Q96PP9 640 aa13.22□□□□□ -0.29
ABCA8-201ENST00000269080 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.3
ABCA8-201ENST00000269080 NUDCQ9Y266 331 aa13.2□□□□□ -0.3
ABCA8-201ENST00000269080 TPM4P67936 248 aa13.19□□□□□ -0.3
ABCA8-201ENST00000269080 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
ABCA8-201ENST00000269080 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
ABCA8-201ENST00000269080 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
ABCA8-201ENST00000269080 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
ABCA8-201ENST00000269080 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
ABCA8-201ENST00000269080 CCAR2Q8N163 923 aaKnown RBP13.18□□□□□ -0.3
ABCA8-201ENST00000269080 IPO9Q96P70 1041 aaKnown RBP13.18□□□□□ -0.3
ABCA8-201ENST00000269080 TPM3P06753 285 aa13.18□□□□□ -0.3
ABCA8-201ENST00000269080 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
ABCA8-201ENST00000269080 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
ABCA8-201ENST00000269080 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
ABCA8-201ENST00000269080 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
ABCA8-201ENST00000269080 MCCP23508 829 aa13.17□□□□□ -0.3
ABCA8-201ENST00000269080 GPS2Q13227 327 aa13.17□□□□□ -0.3
ABCA8-201ENST00000269080 ISY1Q9ULR0 285 aaKnown RBP13.17□□□□□ -0.3
ABCA8-201ENST00000269080 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
ABCA8-201ENST00000269080 MAPK8IP3Q9UPT6 1336 aa13.16□□□□□ -0.3
ABCA8-201ENST00000269080 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
ABCA8-201ENST00000269080 FHAD1B1AJZ9 1412 aa13.15□□□□□ -0.3
ABCA8-201ENST00000269080 CEP89Q96ST8 783 aa13.15□□□□□ -0.3
ABCA8-201ENST00000269080 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
ABCA8-201ENST00000269080 CREBRFQ8IUR6 639 aa13.14□□□□□ -0.31
ABCA8-201ENST00000269080 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
ABCA8-201ENST00000269080 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
ABCA8-201ENST00000269080 CUX2O14529 1486 aa13.13□□□□□ -0.31
ABCA8-201ENST00000269080 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
ABCA8-201ENST00000269080 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
ABCA8-201ENST00000269080 TEX35Q5T0J7 233 aa13.13□□□□□ -0.31
ABCA8-201ENST00000269080 GGT6Q6P531 493 aa13.13□□□□□ -0.31
ABCA8-201ENST00000269080 PLCD4Q9BRC7 762 aa13.13□□□□□ -0.31
ABCA8-201ENST00000269080 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
ABCA8-201ENST00000269080 EFCAB2Q5VUJ9 269 aa13.12□□□□□ -0.31
ABCA8-201ENST00000269080 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
ABCA8-201ENST00000269080 MAP7D2Q96T17 732 aa13.12□□□□□ -0.31
ABCA8-201ENST00000269080 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
ABCA8-201ENST00000269080 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
ABCA8-201ENST00000269080 CARD11Q9BXL7 1154 aa13.11□□□□□ -0.31
ABCA8-201ENST00000269080 TMX4Q9H1E5 349 aaPredicted RBP13.11□□□□□ -0.31
ABCA8-201ENST00000269080 HSP90B1P14625 803 aaKnown RBP13.1□□□□□ -0.31
ABCA8-201ENST00000269080 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
ABCA8-201ENST00000269080 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
ABCA8-201ENST00000269080 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
ABCA8-201ENST00000269080 CCDC191Q8NCU4 936 aa13.07□□□□□ -0.32
ABCA8-201ENST00000269080 SOGA1O94964 1423 aa13.07□□□□□ -0.32
ABCA8-201ENST00000269080 ZNF592Q92610 1267 aa13.07□□□□□ -0.32
ABCA8-201ENST00000269080 RDXP35241 583 aaKnown RBP13.06□□□□□ -0.32
ABCA8-201ENST00000269080 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
ABCA8-201ENST00000269080 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
ABCA8-201ENST00000269080 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
ABCA8-201ENST00000269080 HMMRO75330 724 aa13.06□□□□□ -0.32
ABCA8-201ENST00000269080 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
ABCA8-201ENST00000269080 CCDC70Q6NSX1 233 aa13.05□□□□□ -0.32
ABCA8-201ENST00000269080 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
ABCA8-201ENST00000269080 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
ABCA8-201ENST00000269080 H0YHG0 523 aa13.04□□□□□ -0.32
ABCA8-201ENST00000269080 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.32
ABCA8-201ENST00000269080 GSE1Q14687 1217 aa13.02□□□□□ -0.32
ABCA8-201ENST00000269080 PES1O00541 588 aaKnown RBP13.02□□□□□ -0.33
ABCA8-201ENST00000269080 RASSF8Q8NHQ8 419 aa13.02□□□□□ -0.33
ABCA8-201ENST00000269080 SIN3AQ96ST3 1273 aa13.02□□□□□ -0.33
ABCA8-201ENST00000269080 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
ABCA8-201ENST00000269080 CCDC34Q96HJ3 373 aa13.01□□□□□ -0.33
ABCA8-201ENST00000269080 TMF1P82094 1093 aa13.01□□□□□ -0.33
ABCA8-201ENST00000269080 MS4A1P11836 297 aa13□□□□□ -0.33
ABCA8-201ENST00000269080 KIAA1211Q6ZU35 1233 aa13□□□□□ -0.33
ABCA8-201ENST00000269080 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
ABCA8-201ENST00000269080 APBB1O00213 710 aa12.99□□□□□ -0.33
ABCA8-201ENST00000269080 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
ABCA8-201ENST00000269080 PHF14O94880 888 aa12.99□□□□□ -0.33
ABCA8-201ENST00000269080 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
ABCA8-201ENST00000269080 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
ABCA8-201ENST00000269080 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
ABCA8-201ENST00000269080 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
ABCA8-201ENST00000269080 CHMP4AQ9BY43 222 aa12.98□□□□□ -0.33
ABCA8-201ENST00000269080 CYB5RLQ6IPT4 315 aa12.97□□□□□ -0.33
ABCA8-201ENST00000269080 SOX12O15370 315 aa12.97□□□□□ -0.33
ABCA8-201ENST00000269080 NEFHP12036 1026 aa12.97□□□□□ -0.33
ABCA8-201ENST00000269080 CSPP1Q1MSJ5 1256 aa12.97□□□□□ -0.33
ABCA8-201ENST00000269080 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms