RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 ABCC5O15440 1437 aa30.34■■■□□ 2.45
LYSMD2-201ENST00000267838 GCC2Q8IWJ2 1684 aa30.33■■■□□ 2.45
LYSMD2-201ENST00000267838 CHIC2Q9UKJ5 165 aa30.33■■■□□ 2.45
LYSMD2-201ENST00000267838 ZNF777Q9ULD5 760 aaPredicted RBP30.31■■■□□ 2.44
LYSMD2-201ENST00000267838 PREX2Q70Z35 1606 aa30.3■■■□□ 2.44
LYSMD2-201ENST00000267838 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.29■■■□□ 2.44
LYSMD2-201ENST00000267838 TTC37Q6PGP7 1564 aa30.28■■■□□ 2.44
LYSMD2-201ENST00000267838 RRP7BPQ9NSQ0 103 aa30.27■■■□□ 2.44
LYSMD2-201ENST00000267838 CDC42BPBQ9Y5S2 1711 aa30.27■■■□□ 2.44
LYSMD2-201ENST00000267838 ROCK1Q13464 1354 aa30.26■■■□□ 2.43
LYSMD2-201ENST00000267838 MAPKBP1O60336 1514 aa30.24■■■□□ 2.43
LYSMD2-201ENST00000267838 CROCC2H7BZ55 1655 aa30.24■■■□□ 2.43
LYSMD2-201ENST00000267838 MYO5CQ9NQX4 1742 aa30.21■■■□□ 2.43
LYSMD2-201ENST00000267838 KCNH8Q96L42 1107 aa30.2■■■□□ 2.43
LYSMD2-201ENST00000267838 ADGBQ8N7X0 1667 aa30.19■■■□□ 2.42
LYSMD2-201ENST00000267838 SAMD9LQ8IVG5 1584 aa30.17■■■□□ 2.42
LYSMD2-201ENST00000267838 ARHGAP5Q13017 1502 aa30.15■■■□□ 2.42
LYSMD2-201ENST00000267838 WDR7Q9Y4E6 1490 aa30.15■■■□□ 2.42
LYSMD2-201ENST00000267838 KDM6BO15054 1643 aa30.15■■■□□ 2.42
LYSMD2-201ENST00000267838 ARHGEF5Q12774 1597 aa30.14■■■□□ 2.42
LYSMD2-201ENST00000267838 ADGRL2O95490 1459 aa30.13■■■□□ 2.41
LYSMD2-201ENST00000267838 SHANK2Q9UPX8 1470 aa30.12■■■□□ 2.41
LYSMD2-201ENST00000267838 MBD5Q9P267 1494 aa30.1■■■□□ 2.41
LYSMD2-201ENST00000267838 PLCH2O75038 1416 aa30.09■■■□□ 2.41
LYSMD2-201ENST00000267838 NCOA1Q15788 1441 aa30.09■■■□□ 2.41
LYSMD2-201ENST00000267838 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.4
LYSMD2-201ENST00000267838 ANKRD30AQ9BXX3 1397 aa30.05■■■□□ 2.4
LYSMD2-201ENST00000267838 C9orf84Q5VXU9 1444 aa30.05■■■□□ 2.4
LYSMD2-201ENST00000267838 ASXL2Q76L83 1435 aa30.05■■■□□ 2.4
LYSMD2-201ENST00000267838 RIMBP3CA6NJZ7 1639 aa30.04■■■□□ 2.4
LYSMD2-201ENST00000267838 RIMBP3BA6NNM3 1639 aa30.04■■■□□ 2.4
LYSMD2-201ENST00000267838 NPM1P06748 294 aaKnown RBP eCLIP30.04■■■□□ 2.4
LYSMD2-201ENST00000267838 CCDC141Q6ZP82 1450 aa30.04■■■□□ 2.4
LYSMD2-201ENST00000267838 RIMBP3Q9UFD9 1639 aa30.04■■■□□ 2.4
LYSMD2-201ENST00000267838 ACIN1Q9UKV3 1341 aaKnown RBP30.04■■■□□ 2.4
LYSMD2-201ENST00000267838 PLEKHH2Q8IVE3 1493 aa30.03■■■□□ 2.4
LYSMD2-201ENST00000267838 SYCP2Q9BX26 1530 aa30.03■■■□□ 2.4
LYSMD2-201ENST00000267838 RSPH4AQ5TD94 716 aa30.03■■■□□ 2.4
LYSMD2-201ENST00000267838 TSPY4P0CV99 314 aa30.01■■■□□ 2.39
LYSMD2-201ENST00000267838 TSPY10P0CW01 314 aa30.01■■■□□ 2.39
LYSMD2-201ENST00000267838 ARAP3Q8WWN8 1544 aa30■■■□□ 2.39
LYSMD2-201ENST00000267838 KIAA1107Q9UPP5 1409 aa30■■■□□ 2.39
LYSMD2-201ENST00000267838 ABCA9Q8IUA7 1624 aa30■■■□□ 2.39
LYSMD2-201ENST00000267838 TRIM52Q96A61 297 aa29.99■■■□□ 2.39
LYSMD2-201ENST00000267838 EFCAB2Q5VUJ9 269 aa29.98■■■□□ 2.39
LYSMD2-201ENST00000267838 SIN3AQ96ST3 1273 aa29.94■■■□□ 2.38
LYSMD2-201ENST00000267838 MAST1Q9Y2H9 1570 aa29.93■■■□□ 2.38
LYSMD2-201ENST00000267838 ABCC1P33527 1531 aa29.92■■■□□ 2.38
LYSMD2-201ENST00000267838 ARHGEF12Q9NZN5 1544 aa29.91■■■□□ 2.38
LYSMD2-201ENST00000267838 CYB5RLQ6IPT4 315 aa29.91■■■□□ 2.38
LYSMD2-201ENST00000267838 DENND4BO75064 1496 aaPredicted RBP29.9■■■□□ 2.38
LYSMD2-201ENST00000267838 ANKRD50Q9ULJ7 1429 aa29.9■■■□□ 2.38
LYSMD2-201ENST00000267838 NEUROD1Q13562 356 aa29.88■■■□□ 2.37
LYSMD2-201ENST00000267838 MPHOSPH9Q99550 1183 aa29.88■■■□□ 2.37
LYSMD2-201ENST00000267838 KIF15Q9NS87 1388 aa29.87■■■□□ 2.37
LYSMD2-201ENST00000267838 TIMELESSQ9UNS1 1208 aa29.84■■■□□ 2.37
LYSMD2-201ENST00000267838 FANCAO15360 1455 aa29.83■■■□□ 2.37
LYSMD2-201ENST00000267838 PLXNC1O60486 1568 aa29.81■■■□□ 2.36
LYSMD2-201ENST00000267838 PZPP20742 1482 aa29.79■■■□□ 2.36
LYSMD2-201ENST00000267838 TRAPPC8Q9Y2L5 1435 aa29.78■■■□□ 2.36
LYSMD2-201ENST00000267838 ZNF316A6NFI3 1004 aaPredicted RBP29.78■■■□□ 2.36
LYSMD2-201ENST00000267838 SLC4A1APQ9BWU0 796 aaKnown RBP29.75■■■□□ 2.35
LYSMD2-201ENST00000267838 CD109Q6YHK3 1445 aa29.71■■■□□ 2.35
LYSMD2-201ENST00000267838 ADGRL1O94910 1474 aa29.71■■■□□ 2.35
LYSMD2-201ENST00000267838 KDM5DQ9BY66 1539 aa29.71■■■□□ 2.35
LYSMD2-201ENST00000267838 TONSLQ96HA7 1378 aa29.71■■■□□ 2.35
LYSMD2-201ENST00000267838 FOXD1Q16676 465 aa29.69■■■□□ 2.34
LYSMD2-201ENST00000267838 DUOX2Q9NRD8 1548 aa29.69■■■□□ 2.34
LYSMD2-201ENST00000267838 CFAP74Q9C0B2 1584 aa29.69■■■□□ 2.34
LYSMD2-201ENST00000267838 RTEL1-TNFRSF6BF6WH68 1400 aa29.68■■■□□ 2.34
LYSMD2-201ENST00000267838 ANKRD30BQ9BXX2 1392 aa29.67■■■□□ 2.34
LYSMD2-201ENST00000267838 SCAPERQ9BY12 1400 aa29.67■■■□□ 2.34
LYSMD2-201ENST00000267838 NUP155O75694 1391 aa29.67■■■□□ 2.34
LYSMD2-201ENST00000267838 SPAG9O60271 1321 aaKnown RBP29.66■■■□□ 2.34
LYSMD2-201ENST00000267838 AFAP1Q8N556 730 aa29.66■■■□□ 2.34
LYSMD2-201ENST00000267838 ZFYVE16Q7Z3T8 1539 aa29.66■■■□□ 2.34
LYSMD2-201ENST00000267838 PPP1R15AO75807 674 aaPredicted RBP29.63■■■□□ 2.33
LYSMD2-201ENST00000267838 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
LYSMD2-201ENST00000267838 UNC13BO14795 1591 aa29.62■■■□□ 2.33
LYSMD2-201ENST00000267838 INO80Q9ULG1 1556 aaPredicted RBP29.61■■■□□ 2.33
LYSMD2-201ENST00000267838 ATP7AQ04656 1500 aa29.59■■■□□ 2.33
LYSMD2-201ENST00000267838 PKD2Q13563 968 aa29.58■■■□□ 2.33
LYSMD2-201ENST00000267838 DNAJC5Q9H3Z4 198 aa29.57■■■□□ 2.32
LYSMD2-201ENST00000267838 GLI2P10070 1586 aa29.57■■■□□ 2.32
LYSMD2-201ENST00000267838 RPRD2Q5VT52 1461 aaKnown RBP29.56■■■□□ 2.32
LYSMD2-201ENST00000267838 MAP3K4Q9Y6R4 1608 aa29.56■■■□□ 2.32
LYSMD2-201ENST00000267838 FAM135AQ9P2D6 1515 aa29.55■■■□□ 2.32
LYSMD2-201ENST00000267838 ZNF518AQ6AHZ1 1483 aa29.53■■■□□ 2.32
LYSMD2-201ENST00000267838 NEO1Q92859 1461 aa29.52■■■□□ 2.32
LYSMD2-201ENST00000267838 DIEXFQ68CQ4 756 aaKnown RBP29.52■■■□□ 2.32
LYSMD2-201ENST00000267838 MAGI2Q86UL8 1455 aa29.51■■■□□ 2.31
LYSMD2-201ENST00000267838 IQGAP3Q86VI3 1631 aa29.5■■■□□ 2.31
LYSMD2-201ENST00000267838 POGZQ7Z3K3 1410 aa29.49■■■□□ 2.31
LYSMD2-201ENST00000267838 DIP2BQ9P265 1576 aa29.47■■■□□ 2.31
LYSMD2-201ENST00000267838 KIDINS220Q9ULH0 1771 aa29.47■■■□□ 2.31
LYSMD2-201ENST00000267838 KDM5CP41229 1560 aa29.46■■■□□ 2.31
LYSMD2-201ENST00000267838 MYT1LQ9UL68 1186 aa29.46■■■□□ 2.31
LYSMD2-201ENST00000267838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.45■■■□□ 2.31
LYSMD2-201ENST00000267838 TEX14Q8IWB6 1497 aa29.42■■■□□ 2.3
LYSMD2-201ENST00000267838 L3MBTL2Q969R5 705 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms