RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.05
SEC22C-201ENST00000264454 ROCK1Q13464 1354 aa14.7□□□□□ -0.06
SEC22C-201ENST00000264454 NAIPQ13075 1403 aa14.69□□□□□ -0.06
SEC22C-201ENST00000264454 ILDR1Q86SU0 546 aaPredicted RBP14.69□□□□□ -0.06
SEC22C-201ENST00000264454 DAPK1P53355 1430 aa14.69□□□□□ -0.06
SEC22C-201ENST00000264454 DNMT1P26358 1616 aaKnown RBP14.68□□□□□ -0.06
SEC22C-201ENST00000264454 ABCC5O15440 1437 aa14.67□□□□□ -0.06
SEC22C-201ENST00000264454 CAMSAP2Q08AD1 1489 aa14.67□□□□□ -0.06
SEC22C-201ENST00000264454 RSPH4AQ5TD94 716 aa14.66□□□□□ -0.06
SEC22C-201ENST00000264454 ZCCHC11Q5TAX3 1644 aaKnown RBP14.65□□□□□ -0.06
SEC22C-201ENST00000264454 ZNF644Q9H582 1327 aaPredicted RBP14.65□□□□□ -0.06
SEC22C-201ENST00000264454 CDC42BPAQ5VT25 1732 aa14.65□□□□□ -0.06
SEC22C-201ENST00000264454 CHIC2Q9UKJ5 165 aa14.63□□□□□ -0.07
SEC22C-201ENST00000264454 ZNF777Q9ULD5 760 aaPredicted RBP14.63□□□□□ -0.07
SEC22C-201ENST00000264454 GCC2Q8IWJ2 1684 aa14.62□□□□□ -0.07
SEC22C-201ENST00000264454 RRP7BPQ9NSQ0 103 aa14.61□□□□□ -0.07
SEC22C-201ENST00000264454 PREX2Q70Z35 1606 aa14.61□□□□□ -0.07
SEC22C-201ENST00000264454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.61□□□□□ -0.07
SEC22C-201ENST00000264454 TIMELESSQ9UNS1 1208 aa14.6□□□□□ -0.07
SEC22C-201ENST00000264454 ADGRL2O95490 1459 aa14.6□□□□□ -0.07
SEC22C-201ENST00000264454 PLEKHH2Q8IVE3 1493 aa14.6□□□□□ -0.07
SEC22C-201ENST00000264454 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
SEC22C-201ENST00000264454 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
SEC22C-201ENST00000264454 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
SEC22C-201ENST00000264454 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
SEC22C-201ENST00000264454 MAPKBP1O60336 1514 aa14.59□□□□□ -0.07
SEC22C-201ENST00000264454 ARHGEF5Q12774 1597 aa14.59□□□□□ -0.07
SEC22C-201ENST00000264454 ANKRD30AQ9BXX3 1397 aa14.58□□□□□ -0.07
SEC22C-201ENST00000264454 PLCH2O75038 1416 aa14.58□□□□□ -0.08
SEC22C-201ENST00000264454 NCOA1Q15788 1441 aa14.58□□□□□ -0.08
SEC22C-201ENST00000264454 KCNH8Q96L42 1107 aa14.58□□□□□ -0.08
SEC22C-201ENST00000264454 KIAA1107Q9UPP5 1409 aa14.57□□□□□ -0.08
SEC22C-201ENST00000264454 CDC42BPBQ9Y5S2 1711 aa14.56□□□□□ -0.08
SEC22C-201ENST00000264454 WDR7Q9Y4E6 1490 aa14.56□□□□□ -0.08
SEC22C-201ENST00000264454 CROCC2H7BZ55 1655 aa14.56□□□□□ -0.08
SEC22C-201ENST00000264454 EFCAB2Q5VUJ9 269 aa14.56□□□□□ -0.08
SEC22C-201ENST00000264454 TTC37Q6PGP7 1564 aa14.56□□□□□ -0.08
SEC22C-201ENST00000264454 ADGBQ8N7X0 1667 aa14.55□□□□□ -0.08
SEC22C-201ENST00000264454 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
SEC22C-201ENST00000264454 ARAP3Q8WWN8 1544 aa14.55□□□□□ -0.08
SEC22C-201ENST00000264454 MYO5CQ9NQX4 1742 aa14.55□□□□□ -0.08
SEC22C-201ENST00000264454 MBD5Q9P267 1494 aa14.55□□□□□ -0.08
SEC22C-201ENST00000264454 CCDC141Q6ZP82 1450 aa14.54□□□□□ -0.08
SEC22C-201ENST00000264454 SAMD9LQ8IVG5 1584 aa14.53□□□□□ -0.08
SEC22C-201ENST00000264454 C9orf84Q5VXU9 1444 aa14.53□□□□□ -0.08
SEC22C-201ENST00000264454 HNRNPMP52272 730 aaKnown RBP eCLIP14.52□□□□□ -0.08
SEC22C-201ENST00000264454 TRIM52Q96A61 297 aa14.52□□□□□ -0.08
SEC22C-201ENST00000264454 ASXL2Q76L83 1435 aa14.51□□□□□ -0.09
SEC22C-201ENST00000264454 MAST1Q9Y2H9 1570 aa14.49□□□□□ -0.09
SEC22C-201ENST00000264454 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
SEC22C-201ENST00000264454 MPHOSPH9Q99550 1183 aa14.48□□□□□ -0.09
SEC22C-201ENST00000264454 KDM6BO15054 1643 aa14.48□□□□□ -0.09
SEC22C-201ENST00000264454 ABCA9Q8IUA7 1624 aa14.48□□□□□ -0.09
SEC22C-201ENST00000264454 ANKRD50Q9ULJ7 1429 aa14.48□□□□□ -0.09
SEC22C-201ENST00000264454 SYCP2Q9BX26 1530 aa14.47□□□□□ -0.09
SEC22C-201ENST00000264454 SIN3AQ96ST3 1273 aa14.46□□□□□ -0.1
SEC22C-201ENST00000264454 NEUROD1Q13562 356 aa14.45□□□□□ -0.1
SEC22C-201ENST00000264454 KIF15Q9NS87 1388 aa14.45□□□□□ -0.1
SEC22C-201ENST00000264454 KDM4FA0A1W2PPD8 638 aa14.44□□□□□ -0.1
SEC22C-201ENST00000264454 ABCC1P33527 1531 aa14.44□□□□□ -0.1
SEC22C-201ENST00000264454 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
SEC22C-201ENST00000264454 FANCAO15360 1455 aa14.41□□□□□ -0.1
SEC22C-201ENST00000264454 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
SEC22C-201ENST00000264454 TONSLQ96HA7 1378 aa14.41□□□□□ -0.1
SEC22C-201ENST00000264454 PLXNC1O60486 1568 aa14.41□□□□□ -0.1
SEC22C-201ENST00000264454 ARHGEF12Q9NZN5 1544 aa14.4□□□□□ -0.1
SEC22C-201ENST00000264454 DENND4BO75064 1496 aaPredicted RBP14.4□□□□□ -0.1
SEC22C-201ENST00000264454 PPP1R15AO75807 674 aaPredicted RBP14.39□□□□□ -0.11
SEC22C-201ENST00000264454 KDM5DQ9BY66 1539 aa14.39□□□□□ -0.11
SEC22C-201ENST00000264454 DUOX2Q9NRD8 1548 aa14.38□□□□□ -0.11
SEC22C-201ENST00000264454 PZPP20742 1482 aa14.38□□□□□ -0.11
SEC22C-201ENST00000264454 ANKRD30BQ9BXX2 1392 aa14.38□□□□□ -0.11
SEC22C-201ENST00000264454 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
SEC22C-201ENST00000264454 CD109Q6YHK3 1445 aa14.37□□□□□ -0.11
SEC22C-201ENST00000264454 NUP155O75694 1391 aa14.37□□□□□ -0.11
SEC22C-201ENST00000264454 SPAG9O60271 1321 aaKnown RBP14.37□□□□□ -0.11
SEC22C-201ENST00000264454 ERBINQ96RT1 1412 aa14.36□□□□□ -0.11
SEC22C-201ENST00000264454 TRAPPC8Q9Y2L5 1435 aa14.36□□□□□ -0.11
SEC22C-201ENST00000264454 CFAP74Q9C0B2 1584 aa14.36□□□□□ -0.11
SEC22C-201ENST00000264454 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
SEC22C-201ENST00000264454 SCAPERQ9BY12 1400 aa14.34□□□□□ -0.11
SEC22C-201ENST00000264454 FAM69CQ0P6D2 419 aa14.34□□□□□ -0.11
SEC22C-201ENST00000264454 DIEXFQ68CQ4 756 aaKnown RBP14.34□□□□□ -0.11
SEC22C-201ENST00000264454 PKD2Q13563 968 aa14.33□□□□□ -0.12
SEC22C-201ENST00000264454 AFAP1Q8N556 730 aa14.33□□□□□ -0.12
SEC22C-201ENST00000264454 RPRD2Q5VT52 1461 aaKnown RBP14.32□□□□□ -0.12
SEC22C-201ENST00000264454 NEO1Q92859 1461 aa14.31□□□□□ -0.12
SEC22C-201ENST00000264454 UNC13BO14795 1591 aa14.3□□□□□ -0.12
SEC22C-201ENST00000264454 GLI2P10070 1586 aa14.3□□□□□ -0.12
SEC22C-201ENST00000264454 ZNF518AQ6AHZ1 1483 aa14.3□□□□□ -0.12
SEC22C-201ENST00000264454 ZFYVE16Q7Z3T8 1539 aa14.3□□□□□ -0.12
SEC22C-201ENST00000264454 FOXD1Q16676 465 aa14.29□□□□□ -0.12
SEC22C-201ENST00000264454 ATP7AQ04656 1500 aa14.28□□□□□ -0.12
SEC22C-201ENST00000264454 INO80Q9ULG1 1556 aaPredicted RBP14.28□□□□□ -0.12
SEC22C-201ENST00000264454 FAM135AQ9P2D6 1515 aa14.27□□□□□ -0.12
SEC22C-201ENST00000264454 MAGI2Q86UL8 1455 aa14.27□□□□□ -0.13
SEC22C-201ENST00000264454 DHX29Q7Z478 1369 aaKnown RBP14.26□□□□□ -0.13
SEC22C-201ENST00000264454 IQGAP3Q86VI3 1631 aa14.25□□□□□ -0.13
SEC22C-201ENST00000264454 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
SEC22C-201ENST00000264454 MYT1LQ9UL68 1186 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms