RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 KDM5BQ9UGL1 1544 aa23.12■■□□□ 1.29
FOXRED1-201ENST00000263578 ZNF644Q9H582 1327 aaPredicted RBP23.12■■□□□ 1.29
FOXRED1-201ENST00000263578 ABCC5O15440 1437 aa23.11■■□□□ 1.29
FOXRED1-201ENST00000263578 CROCC2H7BZ55 1655 aa23.1■■□□□ 1.29
FOXRED1-201ENST00000263578 PREX2Q70Z35 1606 aa23.1■■□□□ 1.29
FOXRED1-201ENST00000263578 CHIC2Q9UKJ5 165 aa23.08■■□□□ 1.29
FOXRED1-201ENST00000263578 ROCK1Q13464 1354 aa23.08■■□□□ 1.28
FOXRED1-201ENST00000263578 TTC37Q6PGP7 1564 aa23.07■■□□□ 1.28
FOXRED1-201ENST00000263578 ADGBQ8N7X0 1667 aa23.07■■□□□ 1.28
FOXRED1-201ENST00000263578 CDC42BPBQ9Y5S2 1711 aa23.06■■□□□ 1.28
FOXRED1-201ENST00000263578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.05■■□□□ 1.28
FOXRED1-201ENST00000263578 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
FOXRED1-201ENST00000263578 ZNF777Q9ULD5 760 aaPredicted RBP23.03■■□□□ 1.28
FOXRED1-201ENST00000263578 MYO5CQ9NQX4 1742 aa23.03■■□□□ 1.28
FOXRED1-201ENST00000263578 KDM6BO15054 1643 aa23.01■■□□□ 1.27
FOXRED1-201ENST00000263578 SAMD9LQ8IVG5 1584 aa22.99■■□□□ 1.27
FOXRED1-201ENST00000263578 ADGRL2O95490 1459 aa22.99■■□□□ 1.27
FOXRED1-201ENST00000263578 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
FOXRED1-201ENST00000263578 ARHGEF5Q12774 1597 aa22.98■■□□□ 1.27
FOXRED1-201ENST00000263578 ARHGAP5Q13017 1502 aa22.96■■□□□ 1.27
FOXRED1-201ENST00000263578 NCOA1Q15788 1441 aa22.93■■□□□ 1.26
FOXRED1-201ENST00000263578 WDR7Q9Y4E6 1490 aa22.92■■□□□ 1.26
FOXRED1-201ENST00000263578 ACIN1Q9UKV3 1341 aaKnown RBP22.91■■□□□ 1.26
FOXRED1-201ENST00000263578 MBD5Q9P267 1494 aa22.91■■□□□ 1.26
FOXRED1-201ENST00000263578 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
FOXRED1-201ENST00000263578 C9orf84Q5VXU9 1444 aa22.9■■□□□ 1.26
FOXRED1-201ENST00000263578 ANKRD30AQ9BXX3 1397 aa22.9■■□□□ 1.26
FOXRED1-201ENST00000263578 CCDC141Q6ZP82 1450 aa22.89■■□□□ 1.25
FOXRED1-201ENST00000263578 SYCP2Q9BX26 1530 aa22.88■■□□□ 1.25
FOXRED1-201ENST00000263578 PLEKHH2Q8IVE3 1493 aa22.87■■□□□ 1.25
FOXRED1-201ENST00000263578 PLCH2O75038 1416 aa22.87■■□□□ 1.25
FOXRED1-201ENST00000263578 TRIM52Q96A61 297 aa22.85■■□□□ 1.25
FOXRED1-201ENST00000263578 ARAP3Q8WWN8 1544 aa22.84■■□□□ 1.25
FOXRED1-201ENST00000263578 HNRNPMP52272 730 aaKnown RBP eCLIP22.84■■□□□ 1.255e-9■■■■■ 27.4
FOXRED1-201ENST00000263578 TSPY4P0CV99 314 aa22.83■■□□□ 1.24
FOXRED1-201ENST00000263578 TSPY10P0CW01 314 aa22.83■■□□□ 1.24
FOXRED1-201ENST00000263578 RSPH4AQ5TD94 716 aa22.83■■□□□ 1.24
FOXRED1-201ENST00000263578 SIN3AQ96ST3 1273 aa22.83■■□□□ 1.24
FOXRED1-201ENST00000263578 KIAA1107Q9UPP5 1409 aa22.83■■□□□ 1.24
FOXRED1-201ENST00000263578 ABCA9Q8IUA7 1624 aa22.82■■□□□ 1.24
FOXRED1-201ENST00000263578 DENND4BO75064 1496 aaPredicted RBP22.82■■□□□ 1.24
FOXRED1-201ENST00000263578 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
FOXRED1-201ENST00000263578 MAST1Q9Y2H9 1570 aa22.82■■□□□ 1.24
FOXRED1-201ENST00000263578 ZNF316A6NFI3 1004 aaPredicted RBP22.81■■□□□ 1.24
FOXRED1-201ENST00000263578 NEUROD1Q13562 356 aa22.8■■□□□ 1.24
FOXRED1-201ENST00000263578 ABCC1P33527 1531 aa22.79■■□□□ 1.24
FOXRED1-201ENST00000263578 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
FOXRED1-201ENST00000263578 ANKRD50Q9ULJ7 1429 aa22.79■■□□□ 1.24
FOXRED1-201ENST00000263578 EFCAB2Q5VUJ9 269 aa22.77■■□□□ 1.24
FOXRED1-201ENST00000263578 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
FOXRED1-201ENST00000263578 KIF15Q9NS87 1388 aa22.76■■□□□ 1.23
FOXRED1-201ENST00000263578 NPM1P06748 294 aaKnown RBP eCLIP22.75■■□□□ 1.23
FOXRED1-201ENST00000263578 ARHGEF12Q9NZN5 1544 aa22.74■■□□□ 1.23
FOXRED1-201ENST00000263578 PLXNC1O60486 1568 aa22.74■■□□□ 1.23
FOXRED1-201ENST00000263578 PZPP20742 1482 aa22.72■■□□□ 1.23
FOXRED1-201ENST00000263578 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
FOXRED1-201ENST00000263578 RIMBP3CA6NJZ7 1639 aa22.69■■□□□ 1.22
FOXRED1-201ENST00000263578 RIMBP3BA6NNM3 1639 aa22.69■■□□□ 1.22
FOXRED1-201ENST00000263578 RIMBP3Q9UFD9 1639 aa22.69■■□□□ 1.22
FOXRED1-201ENST00000263578 FANCAO15360 1455 aa22.68■■□□□ 1.22
FOXRED1-201ENST00000263578 KDM5DQ9BY66 1539 aa22.68■■□□□ 1.22
FOXRED1-201ENST00000263578 SLC4A1APQ9BWU0 796 aaKnown RBP22.67■■□□□ 1.22
FOXRED1-201ENST00000263578 TRAPPC8Q9Y2L5 1435 aa22.65■■□□□ 1.22
FOXRED1-201ENST00000263578 DIEXFQ68CQ4 756 aaKnown RBP22.64■■□□□ 1.21
FOXRED1-201ENST00000263578 ANKRD30BQ9BXX2 1392 aa22.63■■□□□ 1.21
FOXRED1-201ENST00000263578 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
FOXRED1-201ENST00000263578 PPP1R15AO75807 674 aaPredicted RBP22.61■■□□□ 1.21
FOXRED1-201ENST00000263578 FOXD1Q16676 465 aa22.61■■□□□ 1.21
FOXRED1-201ENST00000263578 UNC13BO14795 1591 aa22.6■■□□□ 1.21
FOXRED1-201ENST00000263578 CFAP74Q9C0B2 1584 aa22.6■■□□□ 1.21
FOXRED1-201ENST00000263578 ZFYVE16Q7Z3T8 1539 aa22.6■■□□□ 1.21
FOXRED1-201ENST00000263578 NUP155O75694 1391 aa22.6■■□□□ 1.21
FOXRED1-201ENST00000263578 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
FOXRED1-201ENST00000263578 RTEL1-TNFRSF6BF6WH68 1400 aa22.58■■□□□ 1.21
FOXRED1-201ENST00000263578 RPRD2Q5VT52 1461 aaKnown RBP22.58■■□□□ 1.2
FOXRED1-201ENST00000263578 ERBINQ96RT1 1412 aa22.57■■□□□ 1.2
FOXRED1-201ENST00000263578 INO80Q9ULG1 1556 aaPredicted RBP22.57■■□□□ 1.2
FOXRED1-201ENST00000263578 CD109Q6YHK3 1445 aa22.55■■□□□ 1.2
FOXRED1-201ENST00000263578 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
FOXRED1-201ENST00000263578 SCAPERQ9BY12 1400 aa22.54■■□□□ 1.2
FOXRED1-201ENST00000263578 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
FOXRED1-201ENST00000263578 FAM135AQ9P2D6 1515 aa22.53■■□□□ 1.2
FOXRED1-201ENST00000263578 PKD2Q13563 968 aa22.53■■□□□ 1.2
FOXRED1-201ENST00000263578 ATP7AQ04656 1500 aa22.53■■□□□ 1.2
FOXRED1-201ENST00000263578 AFAP1Q8N556 730 aa22.51■■□□□ 1.19
FOXRED1-201ENST00000263578 IQGAP3Q86VI3 1631 aa22.51■■□□□ 1.19
FOXRED1-201ENST00000263578 MAGI2Q86UL8 1455 aa22.51■■□□□ 1.19
FOXRED1-201ENST00000263578 TEX14Q8IWB6 1497 aa22.49■■□□□ 1.19
FOXRED1-201ENST00000263578 ZNF518AQ6AHZ1 1483 aa22.47■■□□□ 1.19
FOXRED1-201ENST00000263578 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
FOXRED1-201ENST00000263578 GLI2P10070 1586 aa22.45■■□□□ 1.18
FOXRED1-201ENST00000263578 NEO1Q92859 1461 aa22.43■■□□□ 1.18
FOXRED1-201ENST00000263578 KIDINS220Q9ULH0 1771 aa22.43■■□□□ 1.18
FOXRED1-201ENST00000263578 L3MBTL2Q969R5 705 aa22.43■■□□□ 1.18
FOXRED1-201ENST00000263578 KDM5CP41229 1560 aa22.42■■□□□ 1.18
FOXRED1-201ENST00000263578 POGZQ7Z3K3 1410 aa22.42■■□□□ 1.18
FOXRED1-201ENST00000263578 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
FOXRED1-201ENST00000263578 EIF2AK4Q9P2K8 1649 aaKnown RBP22.41■■□□□ 1.18
FOXRED1-201ENST00000263578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.171e-6■■■□□ 16.9
FOXRED1-201ENST00000263578 DIP2BQ9P265 1576 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms