RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PDE4CQ08493 712 aa18.19■□□□□ 0.5
CUX2-201ENST00000261726 L1TD1Q5T7N2 865 aaKnown RBP18.19■□□□□ 0.5
CUX2-201ENST00000261726 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
CUX2-201ENST00000261726 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
CUX2-201ENST00000261726 SRPK2P78362 688 aaKnown RBP18.15■□□□□ 0.5
CUX2-201ENST00000261726 SIN3AQ96ST3 1273 aa18.14■□□□□ 0.49
CUX2-201ENST00000261726 MLECQ14165 292 aa18.13■□□□□ 0.49
CUX2-201ENST00000261726 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
CUX2-201ENST00000261726 KIAA1211Q6ZU35 1233 aa18.12■□□□□ 0.49
CUX2-201ENST00000261726 GZF1Q9H116 711 aaPredicted RBP18.11■□□□□ 0.49
CUX2-201ENST00000261726 DEKP35659 375 aaKnown RBP18.1■□□□□ 0.49
CUX2-201ENST00000261726 TMF1P82094 1093 aa18.09■□□□□ 0.49
CUX2-201ENST00000261726 MORC1Q86VD1 984 aa18.09■□□□□ 0.49
CUX2-201ENST00000261726 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.49
CUX2-201ENST00000261726 HSP90B1P14625 803 aaKnown RBP18.08■□□□□ 0.48
CUX2-201ENST00000261726 DCAF11Q8TEB1 546 aa18.08■□□□□ 0.48
CUX2-201ENST00000261726 A0A0U1RQG5 324 aaPredicted RBP18.06■□□□□ 0.48
CUX2-201ENST00000261726 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
CUX2-201ENST00000261726 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
CUX2-201ENST00000261726 ANO8Q9HCE9 1232 aaPredicted RBP18.04■□□□□ 0.48
CUX2-201ENST00000261726 STK26Q9P289 416 aa18.04■□□□□ 0.48
CUX2-201ENST00000261726 CREBRFQ8IUR6 639 aa18.03■□□□□ 0.48
CUX2-201ENST00000261726 TRHP20396 242 aaPredicted RBP18.02■□□□□ 0.48
CUX2-201ENST00000261726 SLKQ9H2G2 1235 aaPredicted RBP18.02■□□□□ 0.47
CUX2-201ENST00000261726 CSB-PGBD3P0DP91 1061 aa18.01■□□□□ 0.47
CUX2-201ENST00000261726 GBP4Q96PP9 640 aa18.01■□□□□ 0.47
CUX2-201ENST00000261726 CHMP3Q9Y3E7 222 aa18.01■□□□□ 0.47
CUX2-201ENST00000261726 ITPRIPQ8IWB1 547 aa18.01■□□□□ 0.47
CUX2-201ENST00000261726 CFAP44Q96MT7 982 aa18.01■□□□□ 0.47
CUX2-201ENST00000261726 SOGA1O94964 1423 aa18■□□□□ 0.47
CUX2-201ENST00000261726 TNNT3P45378 269 aaPredicted RBP18■□□□□ 0.47
CUX2-201ENST00000261726 CEP162Q5TB80 1403 aa18■□□□□ 0.47
CUX2-201ENST00000261726 GORABQ5T7V8 394 aa17.99■□□□□ 0.47
CUX2-201ENST00000261726 GOLGA3Q08378 1498 aa17.99■□□□□ 0.47
CUX2-201ENST00000261726 TPM4P67936 248 aa17.99■□□□□ 0.47
CUX2-201ENST00000261726 TMX4Q9H1E5 349 aaPredicted RBP17.99■□□□□ 0.47
CUX2-201ENST00000261726 RASSF8Q8NHQ8 419 aa17.98■□□□□ 0.47
CUX2-201ENST00000261726 HTATSF1O43719 755 aaKnown RBP17.97■□□□□ 0.47
CUX2-201ENST00000261726 EEA1Q15075 1411 aa17.97■□□□□ 0.47
CUX2-201ENST00000261726 KANK1Q14678 1352 aa17.97■□□□□ 0.47
CUX2-201ENST00000261726 IPO8O15397 1037 aaKnown RBP17.96■□□□□ 0.47
CUX2-201ENST00000261726 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
CUX2-201ENST00000261726 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
CUX2-201ENST00000261726 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.96■□□□□ 0.47
CUX2-201ENST00000261726 TAF7LQ5H9L4 462 aa17.95■□□□□ 0.46
CUX2-201ENST00000261726 TRIM6-TRIM34B2RNG4 842 aa17.95■□□□□ 0.46
CUX2-201ENST00000261726 GOLGA6L1Q8N7Z2 621 aa17.95■□□□□ 0.46
CUX2-201ENST00000261726 CCDC9Q9Y3X0 531 aaKnown RBP17.94■□□□□ 0.46
CUX2-201ENST00000261726 MFAP1P55081 439 aaKnown RBP17.94■□□□□ 0.46
CUX2-201ENST00000261726 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
CUX2-201ENST00000261726 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
CUX2-201ENST00000261726 SYAP1Q96A49 352 aaPredicted RBP17.93■□□□□ 0.46
CUX2-201ENST00000261726 PTMSP20962 102 aa17.93■□□□□ 0.46
CUX2-201ENST00000261726 G3V3G9 751 aa17.92■□□□□ 0.46
CUX2-201ENST00000261726 DCAF8Q5TAQ9 597 aa17.92■□□□□ 0.46
CUX2-201ENST00000261726 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
CUX2-201ENST00000261726 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
CUX2-201ENST00000261726 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
CUX2-201ENST00000261726 CCNB3Q8WWL7 1395 aa17.9■□□□□ 0.46
CUX2-201ENST00000261726 RBM19Q9Y4C8 960 aaKnown RBP17.9■□□□□ 0.46
CUX2-201ENST00000261726 RWDD1Q9H446 243 aaPredicted RBP17.9■□□□□ 0.46
CUX2-201ENST00000261726 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
CUX2-201ENST00000261726 GPATCH3Q96I76 525 aa17.89■□□□□ 0.45
CUX2-201ENST00000261726 EIF4G1Q04637 1599 aaKnown RBP17.88■□□□□ 0.45
CUX2-201ENST00000261726 GGT6Q6P531 493 aa17.88■□□□□ 0.45
CUX2-201ENST00000261726 TOMM22Q9NS69 142 aa17.88■□□□□ 0.45
CUX2-201ENST00000261726 CEP89Q96ST8 783 aa17.87■□□□□ 0.45
CUX2-201ENST00000261726 KTN1Q86UP2 1357 aaKnown RBP17.87■□□□□ 0.45
CUX2-201ENST00000261726 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
CUX2-201ENST00000261726 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
CUX2-201ENST00000261726 FOXD4L5Q5VV16 416 aaPredicted RBP17.87■□□□□ 0.45
CUX2-201ENST00000261726 FOXD4L4Q8WXT5 416 aaPredicted RBP17.87■□□□□ 0.45
CUX2-201ENST00000261726 KRI1Q8N9T8 703 aaKnown RBP17.87■□□□□ 0.45
CUX2-201ENST00000261726 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
CUX2-201ENST00000261726 CCDC34Q96HJ3 373 aa17.86■□□□□ 0.45
CUX2-201ENST00000261726 FBXO3Q9UK99 471 aa17.86■□□□□ 0.45
CUX2-201ENST00000261726 GOLGA6L3A6NEY3 463 aa17.86■□□□□ 0.45
CUX2-201ENST00000261726 WWC1Q8IX03 1113 aa17.85■□□□□ 0.45
CUX2-201ENST00000261726 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
CUX2-201ENST00000261726 MARCH6O60337 910 aa17.85■□□□□ 0.45
CUX2-201ENST00000261726 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
CUX2-201ENST00000261726 PES1O00541 588 aaKnown RBP17.85■□□□□ 0.45
CUX2-201ENST00000261726 RCAN3Q9UKA8 241 aa17.84■□□□□ 0.45
CUX2-201ENST00000261726 HSPA5P11021 654 aaKnown RBP17.84■□□□□ 0.45
CUX2-201ENST00000261726 FRAT2O75474 233 aaPredicted RBP17.82■□□□□ 0.44
CUX2-201ENST00000261726 TPM3P06753 285 aa17.82■□□□□ 0.44
CUX2-201ENST00000261726 SPAG9O60271 1321 aaKnown RBP17.82■□□□□ 0.44
CUX2-201ENST00000261726 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
CUX2-201ENST00000261726 TNIKQ9UKE5 1360 aa17.82■□□□□ 0.44
CUX2-201ENST00000261726 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
CUX2-201ENST00000261726 FOXD1Q16676 465 aa17.81■□□□□ 0.44
CUX2-201ENST00000261726 CSPP1Q1MSJ5 1256 aa17.8■□□□□ 0.44
CUX2-201ENST00000261726 PMFBP1Q8TBY8 1022 aa17.8■□□□□ 0.44
CUX2-201ENST00000261726 CUX2O14529 1486 aa17.79■□□□□ 0.44
CUX2-201ENST00000261726 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
CUX2-201ENST00000261726 SF3A1Q15459 793 aaKnown RBP17.78■□□□□ 0.44
CUX2-201ENST00000261726 PATL2C9JE40 543 aaKnown RBP17.77■□□□□ 0.44
CUX2-201ENST00000261726 CCDC146Q8IYE0 955 aa17.77■□□□□ 0.44
CUX2-201ENST00000261726 TPD52L1Q16890 204 aaPredicted RBP17.77■□□□□ 0.44
CUX2-201ENST00000261726 ROCK2O75116 1388 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms