RNA–Protein interactions for RNA: ENST00000261489.6

TSC22D1-201, Transcript of TSC22 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-201ENST00000261489 FOXD1Q16676 465 aa13.12□□□□□ -0.31
TSC22D1-201ENST00000261489 EFCAB2Q5VUJ9 269 aa13.12□□□□□ -0.31
TSC22D1-201ENST00000261489 SETD5Q9C0A6 1442 aa13.11□□□□□ -0.31
TSC22D1-201ENST00000261489 RIMBP3CA6NJZ7 1639 aa13.11□□□□□ -0.31
TSC22D1-201ENST00000261489 RIMBP3BA6NNM3 1639 aa13.11□□□□□ -0.31
TSC22D1-201ENST00000261489 RIMBP3Q9UFD9 1639 aa13.11□□□□□ -0.31
TSC22D1-201ENST00000261489 UHRF1BP1LA0JNW5 1464 aa13.11□□□□□ -0.31
TSC22D1-201ENST00000261489 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
TSC22D1-201ENST00000261489 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
TSC22D1-201ENST00000261489 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
TSC22D1-201ENST00000261489 ABCC5O15440 1437 aa13.09□□□□□ -0.31
TSC22D1-201ENST00000261489 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
TSC22D1-201ENST00000261489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
TSC22D1-201ENST00000261489 WDR7Q9Y4E6 1490 aa13.09□□□□□ -0.31
TSC22D1-201ENST00000261489 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
TSC22D1-201ENST00000261489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.31
TSC22D1-201ENST00000261489 TTC37Q6PGP7 1564 aa13.08□□□□□ -0.32
TSC22D1-201ENST00000261489 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
TSC22D1-201ENST00000261489 DAPK1P53355 1430 aa13.07□□□□□ -0.32
TSC22D1-201ENST00000261489 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
TSC22D1-201ENST00000261489 DHX57Q6P158 1386 aaKnown RBP13.06□□□□□ -0.32
TSC22D1-201ENST00000261489 NAIPQ13075 1403 aa13.05□□□□□ -0.32
TSC22D1-201ENST00000261489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
TSC22D1-201ENST00000261489 CD109Q6YHK3 1445 aa13.04□□□□□ -0.32
TSC22D1-201ENST00000261489 PLCH2O75038 1416 aa13.03□□□□□ -0.32
TSC22D1-201ENST00000261489 TCOF1Q13428 1488 aaKnown RBP13.02□□□□□ -0.33
TSC22D1-201ENST00000261489 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
TSC22D1-201ENST00000261489 SLC4A1APQ9BWU0 796 aaKnown RBP13.01□□□□□ -0.33
TSC22D1-201ENST00000261489 TRAPPC8Q9Y2L5 1435 aa13.01□□□□□ -0.33
TSC22D1-201ENST00000261489 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
TSC22D1-201ENST00000261489 HFM1A2PYH4 1435 aa13□□□□□ -0.33
TSC22D1-201ENST00000261489 SYCP2Q9BX26 1530 aa13□□□□□ -0.33
TSC22D1-201ENST00000261489 FANCAO15360 1455 aa13□□□□□ -0.33
TSC22D1-201ENST00000261489 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
TSC22D1-201ENST00000261489 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
TSC22D1-201ENST00000261489 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
TSC22D1-201ENST00000261489 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
TSC22D1-201ENST00000261489 NCOA1Q15788 1441 aa12.99□□□□□ -0.33
TSC22D1-201ENST00000261489 C9orf84Q5VXU9 1444 aa12.99□□□□□ -0.33
TSC22D1-201ENST00000261489 ANKRD30AQ9BXX3 1397 aa12.98□□□□□ -0.33
TSC22D1-201ENST00000261489 MPHOSPH9Q99550 1183 aa12.98□□□□□ -0.33
TSC22D1-201ENST00000261489 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
TSC22D1-201ENST00000261489 KIF15Q9NS87 1388 aa12.98□□□□□ -0.33
TSC22D1-201ENST00000261489 CDC42BPBQ9Y5S2 1711 aa12.98□□□□□ -0.33
TSC22D1-201ENST00000261489 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
TSC22D1-201ENST00000261489 SAMD9LQ8IVG5 1584 aa12.97□□□□□ -0.33
TSC22D1-201ENST00000261489 AKNAQ7Z591 1439 aa12.97□□□□□ -0.33
TSC22D1-201ENST00000261489 KDM6BO15054 1643 aa12.97□□□□□ -0.33
TSC22D1-201ENST00000261489 ADGRL1O94910 1474 aa12.95□□□□□ -0.34
TSC22D1-201ENST00000261489 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
TSC22D1-201ENST00000261489 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
TSC22D1-201ENST00000261489 NUP155O75694 1391 aa12.94□□□□□ -0.34
TSC22D1-201ENST00000261489 ITSN2Q9NZM3 1697 aa12.94□□□□□ -0.34
TSC22D1-201ENST00000261489 KIF3BO15066 747 aa12.93□□□□□ -0.34
TSC22D1-201ENST00000261489 PKD2Q13563 968 aa12.93□□□□□ -0.34
TSC22D1-201ENST00000261489 CCDC141Q6ZP82 1450 aa12.93□□□□□ -0.34
TSC22D1-201ENST00000261489 GGT6Q6P531 493 aa12.93□□□□□ -0.34
TSC22D1-201ENST00000261489 DNMT1P26358 1616 aaKnown RBP12.92□□□□□ -0.34
TSC22D1-201ENST00000261489 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
TSC22D1-201ENST00000261489 MYO5CQ9NQX4 1742 aa12.91□□□□□ -0.34
TSC22D1-201ENST00000261489 ROCK1Q13464 1354 aa12.9□□□□□ -0.34
TSC22D1-201ENST00000261489 MLECQ14165 292 aa12.89□□□□□ -0.35
TSC22D1-201ENST00000261489 TSPOAP1O95153 1857 aa12.89□□□□□ -0.35
TSC22D1-201ENST00000261489 PLEKHH2Q8IVE3 1493 aa12.89□□□□□ -0.35
TSC22D1-201ENST00000261489 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
TSC22D1-201ENST00000261489 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
TSC22D1-201ENST00000261489 KCNA4P22459 653 aa12.87□□□□□ -0.35
TSC22D1-201ENST00000261489 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
TSC22D1-201ENST00000261489 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
TSC22D1-201ENST00000261489 ABCA9Q8IUA7 1624 aa12.86□□□□□ -0.35
TSC22D1-201ENST00000261489 RGL3Q3MIN7 710 aa12.85□□□□□ -0.35
TSC22D1-201ENST00000261489 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
TSC22D1-201ENST00000261489 ABCC1P33527 1531 aa12.84□□□□□ -0.35
TSC22D1-201ENST00000261489 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
TSC22D1-201ENST00000261489 DENND4BO75064 1496 aaPredicted RBP12.82□□□□□ -0.36
TSC22D1-201ENST00000261489 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
TSC22D1-201ENST00000261489 ADGRL2O95490 1459 aa12.81□□□□□ -0.36
TSC22D1-201ENST00000261489 CLSPNQ9HAW4 1339 aa12.8□□□□□ -0.36
TSC22D1-201ENST00000261489 L3MBTL2Q969R5 705 aa12.8□□□□□ -0.36
TSC22D1-201ENST00000261489 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
TSC22D1-201ENST00000261489 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
TSC22D1-201ENST00000261489 ARHGEF5Q12774 1597 aa12.8□□□□□ -0.36
TSC22D1-201ENST00000261489 COL17A1Q9UMD9 1497 aaPredicted RBP12.8□□□□□ -0.36
TSC22D1-201ENST00000261489 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
TSC22D1-201ENST00000261489 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
TSC22D1-201ENST00000261489 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
TSC22D1-201ENST00000261489 POGZQ7Z3K3 1410 aa12.78□□□□□ -0.36
TSC22D1-201ENST00000261489 WASHC2CQ9Y4E1 1318 aa12.77□□□□□ -0.36
TSC22D1-201ENST00000261489 PZPP20742 1482 aa12.77□□□□□ -0.37
TSC22D1-201ENST00000261489 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
TSC22D1-201ENST00000261489 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
TSC22D1-201ENST00000261489 DHX29Q7Z478 1369 aaKnown RBP12.76□□□□□ -0.37
TSC22D1-201ENST00000261489 ATP7AQ04656 1500 aa12.75□□□□□ -0.37
TSC22D1-201ENST00000261489 PPP1R15AO75807 674 aaPredicted RBP12.75□□□□□ -0.37
TSC22D1-201ENST00000261489 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
TSC22D1-201ENST00000261489 CROCC2H7BZ55 1655 aa12.75□□□□□ -0.37
TSC22D1-201ENST00000261489 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
TSC22D1-201ENST00000261489 ARAP3Q8WWN8 1544 aa12.74□□□□□ -0.37
TSC22D1-201ENST00000261489 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
TSC22D1-201ENST00000261489 NEO1Q92859 1461 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms