RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 EIF4G3O43432 1585 aaKnown RBP6.24□□□□□ -1.41
RBM39-201ENST00000253363 BIVM-ERCC5R4GMW8 1640 aa6.24□□□□□ -1.41
RBM39-201ENST00000253363 IFNL1Q8IU54 200 aa6.23□□□□□ -1.41
RBM39-201ENST00000253363 EFCAB3Q8N7B9 438 aa6.23□□□□□ -1.41
RBM39-201ENST00000253363 MAGI1Q96QZ7 1491 aaPredicted RBP6.23□□□□□ -1.41
RBM39-201ENST00000253363 ZC3H15Q8WU90 426 aaKnown RBP6.23□□□□□ -1.41
RBM39-201ENST00000253363 CABP2Q9NPB3 220 aa6.22□□□□□ -1.41
RBM39-201ENST00000253363 PHF8Q9UPP1 1060 aa6.22□□□□□ -1.41
RBM39-201ENST00000253363 FBXO22Q8NEZ5 403 aa6.22□□□□□ -1.41
RBM39-201ENST00000253363 SLC24A3Q9HC58 644 aa6.22□□□□□ -1.41
RBM39-201ENST00000253363 POLA1P09884 1462 aaPredicted RBP6.22□□□□□ -1.41
RBM39-201ENST00000253363 E2F4Q16254 413 aa6.21□□□□□ -1.42
RBM39-201ENST00000253363 C14orf37Q86TY3 774 aa6.21□□□□□ -1.42
RBM39-201ENST00000253363 ARXQ96QS3 562 aa6.21□□□□□ -1.42
RBM39-201ENST00000253363 NCKAP5LQ9HCH0 1330 aa6.21□□□□□ -1.42
RBM39-201ENST00000253363 TOP2BQ02880 1626 aa6.2□□□□□ -1.42
RBM39-201ENST00000253363 ABCA10Q8WWZ4 1543 aa6.2□□□□□ -1.42
RBM39-201ENST00000253363 MAP3K13O43283 966 aa6.2□□□□□ -1.42
RBM39-201ENST00000253363 GRIN2BQ13224 1484 aa6.19□□□□□ -1.42
RBM39-201ENST00000253363 CUX1P39880 1505 aa6.19□□□□□ -1.42
RBM39-201ENST00000253363 ABCA5Q8WWZ7 1642 aa6.19□□□□□ -1.42
RBM39-201ENST00000253363 NEUROD2Q15784 382 aa6.19□□□□□ -1.42
RBM39-201ENST00000253363 ARHGEF1Q92888 912 aaKnown RBP6.19□□□□□ -1.42
RBM39-201ENST00000253363 SYNJ1O43426 1573 aa6.19□□□□□ -1.42
RBM39-201ENST00000253363 FGD5Q6ZNL6 1462 aa6.19□□□□□ -1.42
RBM39-201ENST00000253363 PRKAR2AP13861 404 aaKnown RBP6.18□□□□□ -1.42
RBM39-201ENST00000253363 TESPA1A2RU30 521 aaPredicted RBP6.18□□□□□ -1.42
RBM39-201ENST00000253363 ZNF579Q8NAF0 562 aaKnown RBP6.18□□□□□ -1.42
RBM39-201ENST00000253363 PBRM1Q86U86 1689 aa6.17□□□□□ -1.42
RBM39-201ENST00000253363 ERICH3Q5RHP9 1530 aa6.17□□□□□ -1.42
RBM39-201ENST00000253363 WRNQ14191 1432 aaPredicted RBP eCLIP6.17□□□□□ -1.42
RBM39-201ENST00000253363 SOGA1O94964 1423 aa6.17□□□□□ -1.42
RBM39-201ENST00000253363 MS4A4AQ96JQ5 239 aa6.16□□□□□ -1.42
RBM39-201ENST00000253363 LARP6Q9BRS8 491 aaKnown RBP6.16□□□□□ -1.42
RBM39-201ENST00000253363 SYNJ2O15056 1496 aa6.16□□□□□ -1.42
RBM39-201ENST00000253363 CLASP1Q7Z460 1538 aa6.15□□□□□ -1.43
RBM39-201ENST00000253363 KIF12Q96FN5 646 aa6.14□□□□□ -1.43
RBM39-201ENST00000253363 ADAMTS12P58397 1594 aa6.14□□□□□ -1.43
RBM39-201ENST00000253363 CHD1O14646 1710 aa6.14□□□□□ -1.43
RBM39-201ENST00000253363 TTBK1Q5TCY1 1321 aaPredicted RBP6.14□□□□□ -1.43
RBM39-201ENST00000253363 GAPVD1Q14C86 1478 aa6.14□□□□□ -1.43
RBM39-201ENST00000253363 NLRP6P59044 892 aa6.14□□□□□ -1.43
RBM39-201ENST00000253363 ZNF608Q9ULD9 1512 aaPredicted RBP6.13□□□□□ -1.43
RBM39-201ENST00000253363 CUL7Q14999 1698 aa6.13□□□□□ -1.43
RBM39-201ENST00000253363 SUPT5HO00267 1087 aaKnown RBP6.13□□□□□ -1.43
RBM39-201ENST00000253363 GPBP1L1Q9HC44 474 aaPredicted RBP6.13□□□□□ -1.43
RBM39-201ENST00000253363 SNAPC4Q5SXM2 1469 aa6.12□□□□□ -1.43
RBM39-201ENST00000253363 ZMYND10O75800 440 aa6.12□□□□□ -1.43
RBM39-201ENST00000253363 PELP1Q8IZL8 1130 aaKnown RBP6.11□□□□□ -1.43
RBM39-201ENST00000253363 FHAD1B1AJZ9 1412 aa6.11□□□□□ -1.43
RBM39-201ENST00000253363 MLLT3P42568 568 aaPredicted RBP6.11□□□□□ -1.43
RBM39-201ENST00000253363 RBM26Q5T8P6 1007 aaKnown RBP6.11□□□□□ -1.43
RBM39-201ENST00000253363 SOX12O15370 315 aa6.1□□□□□ -1.43
RBM39-201ENST00000253363 CRISPLD2Q9H0B8 497 aa6.1□□□□□ -1.43
RBM39-201ENST00000253363 TRPC6Q9Y210 931 aa6.1□□□□□ -1.43
RBM39-201ENST00000253363 RIMBP3CA6NJZ7 1639 aa6.1□□□□□ -1.43
RBM39-201ENST00000253363 RIMBP3BA6NNM3 1639 aa6.1□□□□□ -1.43
RBM39-201ENST00000253363 RIMBP3Q9UFD9 1639 aa6.1□□□□□ -1.43
RBM39-201ENST00000253363 ARHGEF11O15085 1522 aa6.09□□□□□ -1.43
RBM39-201ENST00000253363 DDX27Q96GQ7 796 aaKnown RBP6.09□□□□□ -1.43
RBM39-201ENST00000253363 PHF12Q96QT6 1004 aa6.09□□□□□ -1.43
RBM39-201ENST00000253363 NUP160Q12769 1436 aa6.09□□□□□ -1.43
RBM39-201ENST00000253363 GRIN2AQ12879 1464 aa6.09□□□□□ -1.43
RBM39-201ENST00000253363 RAD54L2Q9Y4B4 1467 aa6.09□□□□□ -1.43
RBM39-201ENST00000253363 FXR2P51116 673 aaKnown RBP eCLIP6.08□□□□□ -1.447e-33■■□□□ 11.8
RBM39-201ENST00000253363 SHROOM2Q13796 1616 aa6.08□□□□□ -1.44
RBM39-201ENST00000253363 ERICH6Q7L0X2 663 aa6.08□□□□□ -1.44
RBM39-201ENST00000253363 AQRO60306 1485 aaKnown RBP eCLIP6.08□□□□□ -1.442e-10■■■■□ 23
RBM39-201ENST00000253363 MFSD10Q14728 455 aa6.07□□□□□ -1.44
RBM39-201ENST00000253363 PAK3O75914 559 aaPredicted RBP6.07□□□□□ -1.44
RBM39-201ENST00000253363 MYT1Q01538 1121 aa6.07□□□□□ -1.44
RBM39-201ENST00000253363 KIF27Q86VH2 1401 aa6.07□□□□□ -1.44
RBM39-201ENST00000253363 PDE4AP27815 886 aa6.06□□□□□ -1.44
RBM39-201ENST00000253363 BARGINQ6ZT62 677 aa6.05□□□□□ -1.44
RBM39-201ENST00000253363 IL27Q8NEV9 243 aa6.05□□□□□ -1.44
RBM39-201ENST00000253363 TMEM106CQ9BVX2 250 aa6.05□□□□□ -1.44
RBM39-201ENST00000253363 ZRANB1Q9UGI0 708 aa6.05□□□□□ -1.44
RBM39-201ENST00000253363 CAMK2BQ13554 666 aa6.04□□□□□ -1.44
RBM39-201ENST00000253363 RUSC2Q8N2Y8 1516 aa6.04□□□□□ -1.44
RBM39-201ENST00000253363 PIP4P2Q8N4L2 257 aa6.04□□□□□ -1.44
RBM39-201ENST00000253363 TDRD9Q8NDG6 1382 aaKnown RBP6.04□□□□□ -1.44
RBM39-201ENST00000253363 DPYSL4O14531 572 aa6.03□□□□□ -1.44
RBM39-201ENST00000253363 HOMEZQ8IX15 550 aa6.03□□□□□ -1.44
RBM39-201ENST00000253363 RANGAP1P46060 587 aaPredicted RBP6.03□□□□□ -1.44
RBM39-201ENST00000253363 GPIHBP1Q8IV16 184 aa6.03□□□□□ -1.44
RBM39-201ENST00000253363 CHMP7Q8WUX9 453 aaPredicted RBP6.03□□□□□ -1.44
RBM39-201ENST00000253363 EMILIN3Q9NT22 766 aa6.03□□□□□ -1.44
RBM39-201ENST00000253363 EEA1Q15075 1411 aa6.02□□□□□ -1.45
RBM39-201ENST00000253363 CD44P16070 742 aaKnown RBP6.02□□□□□ -1.45
RBM39-201ENST00000253363 GOLGA2Q08379 1002 aa6.02□□□□□ -1.45
RBM39-201ENST00000253363 ARAP1Q96P48 1450 aa6.02□□□□□ -1.45
RBM39-201ENST00000253363 CEP170Q5SW79 1584 aa6.02□□□□□ -1.45
RBM39-201ENST00000253363 SMYD5Q6GMV2 418 aa6.02□□□□□ -1.45
RBM39-201ENST00000253363 ARIH1Q9Y4X5 557 aaPredicted RBP6.02□□□□□ -1.45
RBM39-201ENST00000253363 KIAA0586Q9BVV6 1533 aa6.01□□□□□ -1.45
RBM39-201ENST00000253363 PPP1R15BQ5SWA1 713 aa6.01□□□□□ -1.45
RBM39-201ENST00000253363 CHRDL2Q6WN34 429 aa6.01□□□□□ -1.45
RBM39-201ENST00000253363 MS4A3Q96HJ5 214 aa6.01□□□□□ -1.45
RBM39-201ENST00000253363 KDM4CQ9H3R0 1056 aa6.01□□□□□ -1.45
RBM39-201ENST00000253363 DPY19L2Q6NUT2 758 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms