RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 GPATCH8Q9UKJ3 1502 aaKnown RBP6.08□□□□□ -1.44
UBE4A-201ENST00000252108 PLXNC1O60486 1568 aa6.08□□□□□ -1.44
UBE4A-201ENST00000252108 NEUROD1Q13562 356 aa6.08□□□□□ -1.44
UBE4A-201ENST00000252108 TIMELESSQ9UNS1 1208 aa6.08□□□□□ -1.44
UBE4A-201ENST00000252108 DAPK1P53355 1430 aa6.07□□□□□ -1.44
UBE4A-201ENST00000252108 SAMD9LQ8IVG5 1584 aa6.07□□□□□ -1.44
UBE4A-201ENST00000252108 LAMC1P11047 1609 aa6.07□□□□□ -1.44
UBE4A-201ENST00000252108 DEPDC5O75140 1603 aa6.07□□□□□ -1.44
UBE4A-201ENST00000252108 BCORL1Q5H9F3 1711 aa6.06□□□□□ -1.44
UBE4A-201ENST00000252108 RPRD2Q5VT52 1461 aaKnown RBP6.06□□□□□ -1.44
UBE4A-201ENST00000252108 KDM5CP41229 1560 aa6.05□□□□□ -1.44
UBE4A-201ENST00000252108 CAMSAP2Q08AD1 1489 aa6.05□□□□□ -1.44
UBE4A-201ENST00000252108 RNF17Q9BXT8 1623 aaKnown RBP6.05□□□□□ -1.44
UBE4A-201ENST00000252108 TROQ12816 1431 aaPredicted RBP6.05□□□□□ -1.44
UBE4A-201ENST00000252108 PPP1R15AO75807 674 aaPredicted RBP6.05□□□□□ -1.44
UBE4A-201ENST00000252108 TTC37Q6PGP7 1564 aa6.04□□□□□ -1.44
UBE4A-201ENST00000252108 PLB1Q6P1J6 1458 aa6.04□□□□□ -1.44
UBE4A-201ENST00000252108 IQGAP3Q86VI3 1631 aa6.04□□□□□ -1.44
UBE4A-201ENST00000252108 ERCC6L2Q5T890 1561 aa6.04□□□□□ -1.44
UBE4A-201ENST00000252108 NEURL4Q96JN8 1562 aa6.04□□□□□ -1.44
UBE4A-201ENST00000252108 VWDEQ8N2E2 1590 aa6.04□□□□□ -1.44
UBE4A-201ENST00000252108 ATP10BO94823 1461 aa6.04□□□□□ -1.44
UBE4A-201ENST00000252108 HNRNPUL2Q1KMD3 747 aaKnown RBP6.03□□□□□ -1.44
UBE4A-201ENST00000252108 ARAP3Q8WWN8 1544 aa6.03□□□□□ -1.44
UBE4A-201ENST00000252108 ANKRD30BQ9BXX2 1392 aa6.03□□□□□ -1.44
UBE4A-201ENST00000252108 TTBK1Q5TCY1 1321 aaPredicted RBP6.03□□□□□ -1.44
UBE4A-201ENST00000252108 MIER1Q8N108 512 aa6.03□□□□□ -1.44
UBE4A-201ENST00000252108 ARHGEF12Q9NZN5 1544 aa6.03□□□□□ -1.44
UBE4A-201ENST00000252108 UHRF1BP1LA0JNW5 1464 aa6.02□□□□□ -1.45
UBE4A-201ENST00000252108 NCOA1Q15788 1441 aa6.02□□□□□ -1.45
UBE4A-201ENST00000252108 UHRF1BP1Q6BDS2 1440 aa6.02□□□□□ -1.45
UBE4A-201ENST00000252108 MYO5CQ9NQX4 1742 aa6.02□□□□□ -1.45
UBE4A-201ENST00000252108 TRPM1Q7Z4N2 1603 aa6.02□□□□□ -1.45
UBE4A-201ENST00000252108 IFT172Q9UG01 1749 aa6.01□□□□□ -1.45
UBE4A-201ENST00000252108 ATP10AO60312 1499 aa6.01□□□□□ -1.45
UBE4A-201ENST00000252108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.01□□□□□ -1.45
UBE4A-201ENST00000252108 ABCA9Q8IUA7 1624 aa6.01□□□□□ -1.45
UBE4A-201ENST00000252108 MROH1Q8NDA8 1641 aa6.01□□□□□ -1.45
UBE4A-201ENST00000252108 ZCCHC11Q5TAX3 1644 aaKnown RBP6□□□□□ -1.45
UBE4A-201ENST00000252108 ABCC2Q92887 1545 aa6□□□□□ -1.45
UBE4A-201ENST00000252108 PRG4Q92954 1404 aaPredicted RBP6□□□□□ -1.45
UBE4A-201ENST00000252108 INO80Q9ULG1 1556 aaPredicted RBP5.99□□□□□ -1.45
UBE4A-201ENST00000252108 GTF3C3Q9Y5Q9 886 aa5.99□□□□□ -1.45
UBE4A-201ENST00000252108 PLA2R1Q13018 1463 aa5.98□□□□□ -1.45
UBE4A-201ENST00000252108 ABCC1P33527 1531 aa5.97□□□□□ -1.45
UBE4A-201ENST00000252108 MTUS2Q5JR59 1369 aa5.97□□□□□ -1.45
UBE4A-201ENST00000252108 IQGAP1P46940 1657 aa5.97□□□□□ -1.45
UBE4A-201ENST00000252108 CEP152O94986 1710 aa5.97□□□□□ -1.45
UBE4A-201ENST00000252108 MYT1LQ9UL68 1186 aa5.97□□□□□ -1.45
UBE4A-201ENST00000252108 SPHKAPQ2M3C7 1700 aa5.96□□□□□ -1.46
UBE4A-201ENST00000252108 EIF2AK4Q9P2K8 1649 aaKnown RBP5.95□□□□□ -1.46
UBE4A-201ENST00000252108 MYOM1P52179 1685 aa5.95□□□□□ -1.46
UBE4A-201ENST00000252108 RALGAPBQ86X10 1494 aa5.95□□□□□ -1.46
UBE4A-201ENST00000252108 PRDM15P57071 1507 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-201ENST00000252108 KIAA1210Q9ULL0 1709 aa5.95□□□□□ -1.46
UBE4A-201ENST00000252108 NEFLP07196 543 aa5.95□□□□□ -1.46
UBE4A-201ENST00000252108 SIN3AQ96ST3 1273 aa5.94□□□□□ -1.46
UBE4A-201ENST00000252108 ZFYVE16Q7Z3T8 1539 aa5.94□□□□□ -1.46
UBE4A-201ENST00000252108 KIAA1107Q9UPP5 1409 aa5.94□□□□□ -1.46
UBE4A-201ENST00000252108 DHX29Q7Z478 1369 aaKnown RBP5.93□□□□□ -1.46
UBE4A-201ENST00000252108 ZC3H13Q5T200 1668 aaKnown RBP5.93□□□□□ -1.46
UBE4A-201ENST00000252108 MYO3AQ8NEV4 1616 aa5.93□□□□□ -1.46
UBE4A-201ENST00000252108 MADDQ8WXG6 1647 aa5.93□□□□□ -1.46
UBE4A-201ENST00000252108 FAM135AQ9P2D6 1515 aa5.93□□□□□ -1.46
UBE4A-201ENST00000252108 P3H3Q8IVL6 736 aa5.93□□□□□ -1.46
UBE4A-201ENST00000252108 WDR7Q9Y4E6 1490 aa5.92□□□□□ -1.46
UBE4A-201ENST00000252108 GPRASP1Q5JY77 1395 aa5.92□□□□□ -1.46
UBE4A-201ENST00000252108 SYCP2Q9BX26 1530 aa5.92□□□□□ -1.46
UBE4A-201ENST00000252108 DUOX2Q9NRD8 1548 aa5.92□□□□□ -1.46
UBE4A-201ENST00000252108 ZNF518AQ6AHZ1 1483 aa5.91□□□□□ -1.46
UBE4A-201ENST00000252108 ZMYM4Q5VZL5 1548 aa5.91□□□□□ -1.46
UBE4A-201ENST00000252108 CCDC141Q6ZP82 1450 aa5.91□□□□□ -1.46
UBE4A-201ENST00000252108 ZNF644Q9H582 1327 aaPredicted RBP5.91□□□□□ -1.46
UBE4A-201ENST00000252108 KIDINS220Q9ULH0 1771 aa5.9□□□□□ -1.46
UBE4A-201ENST00000252108 TET3O43151 1660 aa5.9□□□□□ -1.46
UBE4A-201ENST00000252108 FRMPD1Q5SYB0 1578 aa5.9□□□□□ -1.46
UBE4A-201ENST00000252108 C9orf84Q5VXU9 1444 aa5.9□□□□□ -1.46
UBE4A-201ENST00000252108 YTHDC1Q96MU7 727 aaKnown RBP5.9□□□□□ -1.47
UBE4A-201ENST00000252108 WASHC2AQ641Q2 1341 aa5.9□□□□□ -1.47
UBE4A-201ENST00000252108 ERCC6Q03468 1493 aa5.9□□□□□ -1.47
UBE4A-201ENST00000252108 LMTK2Q8IWU2 1503 aa5.9□□□□□ -1.47
UBE4A-201ENST00000252108 CNTLNQ9NXG0 1405 aa5.9□□□□□ -1.47
UBE4A-201ENST00000252108 NRXN1Q9ULB1 1477 aa5.9□□□□□ -1.47
UBE4A-201ENST00000252108 PIK3C2BO00750 1634 aa5.9□□□□□ -1.47
UBE4A-201ENST00000252108 KCNH8Q96L42 1107 aa5.9□□□□□ -1.47
UBE4A-201ENST00000252108 TRPM2O94759 1503 aa5.89□□□□□ -1.47
UBE4A-201ENST00000252108 RANGAP1P46060 587 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-201ENST00000252108 CARMIL2Q6F5E8 1435 aa5.89□□□□□ -1.47
UBE4A-201ENST00000252108 PTPRTO14522 1441 aa5.89□□□□□ -1.47
UBE4A-201ENST00000252108 CCER2I3L3R5 266 aa5.89□□□□□ -1.47
UBE4A-201ENST00000252108 MROH2AA6NES4 1674 aa5.89□□□□□ -1.47
UBE4A-201ENST00000252108 C11orf95C9JLR9 678 aaPredicted RBP5.88□□□□□ -1.47
UBE4A-201ENST00000252108 NBPF8Q3BBV2 869 aa5.88□□□□□ -1.47
UBE4A-201ENST00000252108 ERBINQ96RT1 1412 aa5.88□□□□□ -1.47
UBE4A-201ENST00000252108 CLTCL1P53675 1640 aa5.88□□□□□ -1.47
UBE4A-201ENST00000252108 PPRC1Q5VV67 1664 aaKnown RBP5.88□□□□□ -1.47
UBE4A-201ENST00000252108 SIGLEC1Q9BZZ2 1709 aa5.87□□□□□ -1.47
UBE4A-201ENST00000252108 ANKRD50Q9ULJ7 1429 aa5.87□□□□□ -1.47
UBE4A-201ENST00000252108 A2MP01023 1474 aa5.87□□□□□ -1.47
UBE4A-201ENST00000252108 MPHOSPH9Q99550 1183 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms