RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 PUS7Q96PZ0 661 aaKnown RBP20.53■□□□□ 0.88
PMPCB-201ENST00000249269 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
PMPCB-201ENST00000249269 TONSLQ96HA7 1378 aa20.52■□□□□ 0.87
PMPCB-201ENST00000249269 KCNH8Q96L42 1107 aa20.51■□□□□ 0.87
PMPCB-201ENST00000249269 FAM50AQ14320 339 aaKnown RBP20.5■□□□□ 0.87
PMPCB-201ENST00000249269 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
PMPCB-201ENST00000249269 CCDC18Q5T9S5 1454 aa20.5■□□□□ 0.87
PMPCB-201ENST00000249269 PTPN23Q9H3S7 1636 aa20.49■□□□□ 0.87
PMPCB-201ENST00000249269 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
PMPCB-201ENST00000249269 SLC4A1APQ9BWU0 796 aaKnown RBP20.48■□□□□ 0.87
PMPCB-201ENST00000249269 KIF21AQ7Z4S6 1674 aa20.48■□□□□ 0.87
PMPCB-201ENST00000249269 RBM19Q9Y4C8 960 aaKnown RBP20.47■□□□□ 0.87
PMPCB-201ENST00000249269 AKNAQ7Z591 1439 aa20.47■□□□□ 0.87
PMPCB-201ENST00000249269 FBLN2P98095 1184 aa20.47■□□□□ 0.87
PMPCB-201ENST00000249269 FANCIQ9NVI1 1328 aa20.46■□□□□ 0.87
PMPCB-201ENST00000249269 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
PMPCB-201ENST00000249269 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.44■□□□□ 0.86
PMPCB-201ENST00000249269 SAMD9Q5K651 1589 aa20.43■□□□□ 0.86
PMPCB-201ENST00000249269 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
PMPCB-201ENST00000249269 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
PMPCB-201ENST00000249269 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
PMPCB-201ENST00000249269 ZFP91Q96JP5 570 aaPredicted RBP20.41■□□□□ 0.86
PMPCB-201ENST00000249269 MYOM3Q5VTT5 1437 aa20.4■□□□□ 0.86
PMPCB-201ENST00000249269 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.85
PMPCB-201ENST00000249269 HECW1Q76N89 1606 aa20.38■□□□□ 0.85
PMPCB-201ENST00000249269 NAIPQ13075 1403 aa20.38■□□□□ 0.85
PMPCB-201ENST00000249269 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
PMPCB-201ENST00000249269 NCOA2Q15596 1464 aa20.38■□□□□ 0.85
PMPCB-201ENST00000249269 KDM5BQ9UGL1 1544 aa20.38■□□□□ 0.85
PMPCB-201ENST00000249269 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
PMPCB-201ENST00000249269 GCC2Q8IWJ2 1684 aa20.37■□□□□ 0.85
PMPCB-201ENST00000249269 ZNF592Q92610 1267 aa20.37■□□□□ 0.85
PMPCB-201ENST00000249269 TCOF1Q13428 1488 aaKnown RBP20.36■□□□□ 0.85
PMPCB-201ENST00000249269 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
PMPCB-201ENST00000249269 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
PMPCB-201ENST00000249269 TOPBP1Q92547 1522 aa20.33■□□□□ 0.84
PMPCB-201ENST00000249269 NCLP19338 710 aaKnown RBP20.33■□□□□ 0.84
PMPCB-201ENST00000249269 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.84
PMPCB-201ENST00000249269 CNPY4Q8N129 248 aa20.32■□□□□ 0.84
PMPCB-201ENST00000249269 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
PMPCB-201ENST00000249269 TMED8Q6PL24 325 aaPredicted RBP20.32■□□□□ 0.84
PMPCB-201ENST00000249269 PRDM10Q9NQV6 1147 aa20.32■□□□□ 0.84
PMPCB-201ENST00000249269 UGGT2Q9NYU1 1516 aa20.31■□□□□ 0.84
PMPCB-201ENST00000249269 TEX2Q8IWB9 1127 aa20.28■□□□□ 0.84
PMPCB-201ENST00000249269 TRIM52Q96A61 297 aa20.28■□□□□ 0.84
PMPCB-201ENST00000249269 PTPRKQ15262 1439 aa20.27■□□□□ 0.84
PMPCB-201ENST00000249269 CNTLNQ9NXG0 1405 aa20.26■□□□□ 0.83
PMPCB-201ENST00000249269 MIA2Q96PC5 1412 aa20.26■□□□□ 0.83
PMPCB-201ENST00000249269 IPO4Q8TEX9 1081 aaKnown RBP20.26■□□□□ 0.83
PMPCB-201ENST00000249269 CHRM1P11229 460 aaPredicted RBP20.25■□□□□ 0.83
PMPCB-201ENST00000249269 ABCA5Q8WWZ7 1642 aa20.25■□□□□ 0.83
PMPCB-201ENST00000249269 PPP4R2Q9NY27 417 aa20.25■□□□□ 0.83
PMPCB-201ENST00000249269 CHMP4BQ9H444 224 aaKnown RBP20.24■□□□□ 0.83
PMPCB-201ENST00000249269 POLR1AO95602 1720 aaPredicted RBP20.23■□□□□ 0.83
PMPCB-201ENST00000249269 SECISBP2LQ93073 1101 aaKnown RBP20.22■□□□□ 0.83
PMPCB-201ENST00000249269 LRRIQ1Q96JM4 1722 aa20.22■□□□□ 0.83
PMPCB-201ENST00000249269 CLSTN1O94985 981 aa20.21■□□□□ 0.83
PMPCB-201ENST00000249269 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.82
PMPCB-201ENST00000249269 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
PMPCB-201ENST00000249269 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
PMPCB-201ENST00000249269 RAD54L2Q9Y4B4 1467 aa20.19■□□□□ 0.82
PMPCB-201ENST00000249269 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
PMPCB-201ENST00000249269 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
PMPCB-201ENST00000249269 ROCK1Q13464 1354 aa20.16■□□□□ 0.82
PMPCB-201ENST00000249269 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
PMPCB-201ENST00000249269 WASHC2AQ641Q2 1341 aa20.16■□□□□ 0.82
PMPCB-201ENST00000249269 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
PMPCB-201ENST00000249269 HSPA5P11021 654 aaKnown RBP20.13■□□□□ 0.81
PMPCB-201ENST00000249269 DENND4BO75064 1496 aaPredicted RBP20.11■□□□□ 0.81
PMPCB-201ENST00000249269 HIRIP3Q9BW71 556 aaPredicted RBP20.1■□□□□ 0.81
PMPCB-201ENST00000249269 CCDC7Q96M83 1385 aa20.1■□□□□ 0.81
PMPCB-201ENST00000249269 GAPVD1Q14C86 1478 aa20.1■□□□□ 0.81
PMPCB-201ENST00000249269 RPRD2Q5VT52 1461 aaKnown RBP20.09■□□□□ 0.81
PMPCB-201ENST00000249269 MSH5O43196 834 aa20.09■□□□□ 0.81
PMPCB-201ENST00000249269 PSMD1Q99460 953 aa20.08■□□□□ 0.81
PMPCB-201ENST00000249269 RNF216Q9NWF9 866 aaPredicted RBP20.08■□□□□ 0.81
PMPCB-201ENST00000249269 ARID4BQ4LE39 1312 aaPredicted RBP20.08■□□□□ 0.8
PMPCB-201ENST00000249269 PRKRIP1Q9H875 184 aaPredicted RBP20.07■□□□□ 0.8
PMPCB-201ENST00000249269 BBXQ8WY36 941 aaPredicted RBP20.06■□□□□ 0.8
PMPCB-201ENST00000249269 SPATA31E1Q6ZUB1 1445 aa20.04■□□□□ 0.8
PMPCB-201ENST00000249269 CERS3Q8IU89 383 aa20.04■□□□□ 0.8
PMPCB-201ENST00000249269 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
PMPCB-201ENST00000249269 KCNG1Q9UIX4 513 aa20.04■□□□□ 0.8
PMPCB-201ENST00000249269 FTSJ3Q8IY81 847 aaKnown RBP20.03■□□□□ 0.8
PMPCB-201ENST00000249269 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
PMPCB-201ENST00000249269 NESP48681 1621 aa20.03■□□□□ 0.8
PMPCB-201ENST00000249269 NECTIN2Q92692 538 aa20.02■□□□□ 0.8
PMPCB-201ENST00000249269 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
PMPCB-201ENST00000249269 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.8
PMPCB-201ENST00000249269 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.8
PMPCB-201ENST00000249269 MPHOSPH9Q99550 1183 aa20.02■□□□□ 0.8
PMPCB-201ENST00000249269 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.79
PMPCB-201ENST00000249269 ANKRD30BQ9BXX2 1392 aa20.01■□□□□ 0.79
PMPCB-201ENST00000249269 ZNF692Q9BU19 519 aaPredicted RBP20.01■□□□□ 0.79
PMPCB-201ENST00000249269 DNMT1P26358 1616 aaKnown RBP20■□□□□ 0.79
PMPCB-201ENST00000249269 RNF123Q5XPI4 1314 aa19.98■□□□□ 0.79
PMPCB-201ENST00000249269 IQGAP2Q13576 1575 aa19.98■□□□□ 0.79
PMPCB-201ENST00000249269 CWC22Q9HCG8 908 aaKnown RBP19.97■□□□□ 0.79
PMPCB-201ENST00000249269 WDR62O43379 1518 aa19.97■□□□□ 0.79
PMPCB-201ENST00000249269 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms