RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
SEC61A1-201ENST00000243253 C11orf95C9JLR9 678 aaPredicted RBP16.76■□□□□ 0.27
SEC61A1-201ENST00000243253 FBLN2P98095 1184 aa16.76■□□□□ 0.27
SEC61A1-201ENST00000243253 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
SEC61A1-201ENST00000243253 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
SEC61A1-201ENST00000243253 MBD5Q9P267 1494 aa16.75■□□□□ 0.27
SEC61A1-201ENST00000243253 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
SEC61A1-201ENST00000243253 DAPK1P53355 1430 aa16.74■□□□□ 0.27
SEC61A1-201ENST00000243253 ABCC5O15440 1437 aa16.73■□□□□ 0.27
SEC61A1-201ENST00000243253 ADGBQ8N7X0 1667 aa16.73■□□□□ 0.27
SEC61A1-201ENST00000243253 CCDC184Q52MB2 194 aa16.72■□□□□ 0.27
SEC61A1-201ENST00000243253 ADCY10Q96PN6 1610 aa16.72■□□□□ 0.27
SEC61A1-201ENST00000243253 BCORL1Q5H9F3 1711 aa16.72■□□□□ 0.27
SEC61A1-201ENST00000243253 NUP153P49790 1475 aaKnown RBP16.72■□□□□ 0.27
SEC61A1-201ENST00000243253 ZNF326Q5BKZ1 582 aaKnown RBP16.71■□□□□ 0.27
SEC61A1-201ENST00000243253 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.27
SEC61A1-201ENST00000243253 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
SEC61A1-201ENST00000243253 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
SEC61A1-201ENST00000243253 PZPP20742 1482 aa16.69■□□□□ 0.26
SEC61A1-201ENST00000243253 CCDC7Q96M83 1385 aa16.69■□□□□ 0.26
SEC61A1-201ENST00000243253 MSH5O43196 834 aa16.69■□□□□ 0.26
SEC61A1-201ENST00000243253 FOXD1Q16676 465 aa16.68■□□□□ 0.26
SEC61A1-201ENST00000243253 L3MBTL2Q969R5 705 aa16.68■□□□□ 0.26
SEC61A1-201ENST00000243253 NBPF8Q3BBV2 869 aa16.67■□□□□ 0.26
SEC61A1-201ENST00000243253 KDM5CP41229 1560 aa16.65■□□□□ 0.26
SEC61A1-201ENST00000243253 PRKRIP1Q9H875 184 aaPredicted RBP16.64■□□□□ 0.25
SEC61A1-201ENST00000243253 ITSN2Q9NZM3 1697 aa16.63■□□□□ 0.25
SEC61A1-201ENST00000243253 ADGRL2O95490 1459 aa16.63■□□□□ 0.25
SEC61A1-201ENST00000243253 KIF14Q15058 1648 aa16.63■□□□□ 0.25
SEC61A1-201ENST00000243253 ZNF777Q9ULD5 760 aaPredicted RBP16.63■□□□□ 0.25
SEC61A1-201ENST00000243253 KIAA0586Q9BVV6 1533 aa16.63■□□□□ 0.25
SEC61A1-201ENST00000243253 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEC61A1-201ENST00000243253 ZNF608Q9ULD9 1512 aaPredicted RBP16.62■□□□□ 0.25
SEC61A1-201ENST00000243253 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
SEC61A1-201ENST00000243253 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
SEC61A1-201ENST00000243253 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEC61A1-201ENST00000243253 CDC42BPAQ5VT25 1732 aa16.61■□□□□ 0.25
SEC61A1-201ENST00000243253 NEFLP07196 543 aa16.6■□□□□ 0.25
SEC61A1-201ENST00000243253 ERICH6BQ5W0A0 696 aa16.59■□□□□ 0.25
SEC61A1-201ENST00000243253 FANCIQ9NVI1 1328 aa16.59■□□□□ 0.25
SEC61A1-201ENST00000243253 E9PCH4 1651 aa16.59■□□□□ 0.25
SEC61A1-201ENST00000243253 KIF7Q2M1P5 1343 aa16.58■□□□□ 0.25
SEC61A1-201ENST00000243253 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.25
SEC61A1-201ENST00000243253 EIF4G3O43432 1585 aaKnown RBP16.58■□□□□ 0.24
SEC61A1-201ENST00000243253 ZNF644Q9H582 1327 aaPredicted RBP16.57■□□□□ 0.24
SEC61A1-201ENST00000243253 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
SEC61A1-201ENST00000243253 CEP170Q5SW79 1584 aa16.56■□□□□ 0.24
SEC61A1-201ENST00000243253 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
SEC61A1-201ENST00000243253 GRIN2AQ12879 1464 aa16.55■□□□□ 0.24
SEC61A1-201ENST00000243253 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
SEC61A1-201ENST00000243253 KDM5DQ9BY66 1539 aa16.54■□□□□ 0.24
SEC61A1-201ENST00000243253 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
SEC61A1-201ENST00000243253 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
SEC61A1-201ENST00000243253 TROQ12816 1431 aaPredicted RBP16.51■□□□□ 0.23
SEC61A1-201ENST00000243253 PRG4Q92954 1404 aaPredicted RBP16.51■□□□□ 0.23
SEC61A1-201ENST00000243253 KIAA1107Q9UPP5 1409 aa16.5■□□□□ 0.23
SEC61A1-201ENST00000243253 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
SEC61A1-201ENST00000243253 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
SEC61A1-201ENST00000243253 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
SEC61A1-201ENST00000243253 PPP4R2Q9NY27 417 aa16.47■□□□□ 0.23
SEC61A1-201ENST00000243253 ABCA8O94911 1581 aa16.47■□□□□ 0.23
SEC61A1-201ENST00000243253 PLB1Q6P1J6 1458 aa16.47■□□□□ 0.23
SEC61A1-201ENST00000243253 RALGAPBQ86X10 1494 aa16.47■□□□□ 0.23
SEC61A1-201ENST00000243253 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.23
SEC61A1-201ENST00000243253 SHANK2Q9UPX8 1470 aa16.46■□□□□ 0.23
SEC61A1-201ENST00000243253 PTPRGP23470 1445 aa16.45■□□□□ 0.22
SEC61A1-201ENST00000243253 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
SEC61A1-201ENST00000243253 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
SEC61A1-201ENST00000243253 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
SEC61A1-201ENST00000243253 USP47Q96K76 1375 aa16.41■□□□□ 0.22
SEC61A1-201ENST00000243253 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
SEC61A1-201ENST00000243253 SALL2Q9Y467 1007 aaPredicted RBP16.41■□□□□ 0.22
SEC61A1-201ENST00000243253 TRPM1Q7Z4N2 1603 aa16.4■□□□□ 0.22
SEC61A1-201ENST00000243253 NUP160Q12769 1436 aa16.4■□□□□ 0.22
SEC61A1-201ENST00000243253 ARHGEF5Q12774 1597 aa16.4■□□□□ 0.22
SEC61A1-201ENST00000243253 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
SEC61A1-201ENST00000243253 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
SEC61A1-201ENST00000243253 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
SEC61A1-201ENST00000243253 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
SEC61A1-201ENST00000243253 KDM2AQ9Y2K7 1162 aa16.37■□□□□ 0.21
SEC61A1-201ENST00000243253 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
SEC61A1-201ENST00000243253 ANKRD50Q9ULJ7 1429 aa16.36■□□□□ 0.21
SEC61A1-201ENST00000243253 LAMC1P11047 1609 aa16.35■□□□□ 0.21
SEC61A1-201ENST00000243253 B4GALNT3Q6L9W6 998 aa16.34■□□□□ 0.21
SEC61A1-201ENST00000243253 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
SEC61A1-201ENST00000243253 ATP10BO94823 1461 aa16.33■□□□□ 0.2
SEC61A1-201ENST00000243253 SAMD9LQ8IVG5 1584 aa16.33■□□□□ 0.2
SEC61A1-201ENST00000243253 MYO5CQ9NQX4 1742 aa16.33■□□□□ 0.2
SEC61A1-201ENST00000243253 PREX2Q70Z35 1606 aa16.32■□□□□ 0.2
SEC61A1-201ENST00000243253 UNC13BO14795 1591 aa16.32■□□□□ 0.2
SEC61A1-201ENST00000243253 C9orf84Q5VXU9 1444 aa16.31■□□□□ 0.2
SEC61A1-201ENST00000243253 ANKRD30AQ9BXX3 1397 aa16.31■□□□□ 0.2
SEC61A1-201ENST00000243253 NUDCQ9Y266 331 aa16.31■□□□□ 0.2
SEC61A1-201ENST00000243253 PKD2Q13563 968 aa16.3■□□□□ 0.2
SEC61A1-201ENST00000243253 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
SEC61A1-201ENST00000243253 CFDP1Q9UEE9 299 aaPredicted RBP16.3■□□□□ 0.2
SEC61A1-201ENST00000243253 ROCK2O75116 1388 aaKnown RBP16.29■□□□□ 0.2
SEC61A1-201ENST00000243253 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
SEC61A1-201ENST00000243253 MAST1Q9Y2H9 1570 aa16.29■□□□□ 0.2
SEC61A1-201ENST00000243253 FAM135AQ9P2D6 1515 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms