RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
PFDN5-201ENST00000243040 SUPT6HQ7KZ85 1726 aaKnown RBP16.9■□□□□ 0.3
PFDN5-201ENST00000243040 ITSN2Q9NZM3 1697 aa16.9■□□□□ 0.3
PFDN5-201ENST00000243040 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
PFDN5-201ENST00000243040 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
PFDN5-201ENST00000243040 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
PFDN5-201ENST00000243040 ABCC1P33527 1531 aa16.86■□□□□ 0.29
PFDN5-201ENST00000243040 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
PFDN5-201ENST00000243040 GPATCH8Q9UKJ3 1502 aaKnown RBP16.86■□□□□ 0.29
PFDN5-201ENST00000243040 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
PFDN5-201ENST00000243040 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
PFDN5-201ENST00000243040 ARHGEF40Q8TER5 1519 aa16.84■□□□□ 0.29
PFDN5-201ENST00000243040 SAMD9LQ8IVG5 1584 aa16.83■□□□□ 0.28
PFDN5-201ENST00000243040 KDM5CP41229 1560 aa16.82■□□□□ 0.28
PFDN5-201ENST00000243040 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
PFDN5-201ENST00000243040 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
PFDN5-201ENST00000243040 ZNF518AQ6AHZ1 1483 aa16.8■□□□□ 0.28
PFDN5-201ENST00000243040 CCNB3Q8WWL7 1395 aa16.8■□□□□ 0.28
PFDN5-201ENST00000243040 RAPGEF3O95398 923 aa16.8■□□□□ 0.28
PFDN5-201ENST00000243040 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
PFDN5-201ENST00000243040 HECW2Q9P2P5 1572 aa16.77■□□□□ 0.28
PFDN5-201ENST00000243040 ZFYVE16Q7Z3T8 1539 aa16.77■□□□□ 0.28
PFDN5-201ENST00000243040 ARHGEF12Q9NZN5 1544 aa16.77■□□□□ 0.28
PFDN5-201ENST00000243040 SYCP2Q9BX26 1530 aa16.76■□□□□ 0.27
PFDN5-201ENST00000243040 PLEKHH2Q8IVE3 1493 aa16.76■□□□□ 0.27
PFDN5-201ENST00000243040 KIAA1107Q9UPP5 1409 aa16.74■□□□□ 0.27
PFDN5-201ENST00000243040 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
PFDN5-201ENST00000243040 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
PFDN5-201ENST00000243040 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
PFDN5-201ENST00000243040 MLH3Q9UHC1 1453 aa16.72■□□□□ 0.27
PFDN5-201ENST00000243040 YEATS2Q9ULM3 1422 aa16.71■□□□□ 0.27
PFDN5-201ENST00000243040 APLP2Q06481 763 aa16.71■□□□□ 0.27
PFDN5-201ENST00000243040 KIDINS220Q9ULH0 1771 aa16.71■□□□□ 0.27
PFDN5-201ENST00000243040 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
PFDN5-201ENST00000243040 SIGLEC1Q9BZZ2 1709 aa16.7■□□□□ 0.26
PFDN5-201ENST00000243040 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
PFDN5-201ENST00000243040 CAMSAP2Q08AD1 1489 aa16.7■□□□□ 0.26
PFDN5-201ENST00000243040 REREQ9P2R6 1566 aa16.69■□□□□ 0.26
PFDN5-201ENST00000243040 INO80Q9ULG1 1556 aaPredicted RBP16.69■□□□□ 0.26
PFDN5-201ENST00000243040 MYOM3Q5VTT5 1437 aa16.69■□□□□ 0.26
PFDN5-201ENST00000243040 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
PFDN5-201ENST00000243040 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
PFDN5-201ENST00000243040 MBD5Q9P267 1494 aa16.67■□□□□ 0.26
PFDN5-201ENST00000243040 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
PFDN5-201ENST00000243040 ARHGEF5Q12774 1597 aa16.67■□□□□ 0.26
PFDN5-201ENST00000243040 C9orf84Q5VXU9 1444 aa16.66■□□□□ 0.26
PFDN5-201ENST00000243040 AFAP1Q8N556 730 aa16.66■□□□□ 0.26
PFDN5-201ENST00000243040 ATP10AO60312 1499 aa16.66■□□□□ 0.26
PFDN5-201ENST00000243040 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
PFDN5-201ENST00000243040 ATP7AQ04656 1500 aa16.65■□□□□ 0.26
PFDN5-201ENST00000243040 KDM4FA0A1W2PPD8 638 aa16.64■□□□□ 0.25
PFDN5-201ENST00000243040 CCDC141Q6ZP82 1450 aa16.63■□□□□ 0.25
PFDN5-201ENST00000243040 ZNF644Q9H582 1327 aaPredicted RBP16.63■□□□□ 0.25
PFDN5-201ENST00000243040 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
PFDN5-201ENST00000243040 HNRNPMP52272 730 aaKnown RBP eCLIP16.62■□□□□ 0.25
PFDN5-201ENST00000243040 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
PFDN5-201ENST00000243040 CROCC2H7BZ55 1655 aa16.6■□□□□ 0.25
PFDN5-201ENST00000243040 RTEL1-TNFRSF6BF6WH68 1400 aa16.6■□□□□ 0.25
PFDN5-201ENST00000243040 AGLP35573 1532 aa16.6■□□□□ 0.25
PFDN5-201ENST00000243040 PLXNC1O60486 1568 aa16.6■□□□□ 0.25
PFDN5-201ENST00000243040 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
PFDN5-201ENST00000243040 SPAG9O60271 1321 aaKnown RBP16.59■□□□□ 0.25
PFDN5-201ENST00000243040 FGD6Q6ZV73 1430 aa16.59■□□□□ 0.25
PFDN5-201ENST00000243040 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
PFDN5-201ENST00000243040 MADDQ8WXG6 1647 aa16.59■□□□□ 0.25
PFDN5-201ENST00000243040 FER1L4A9Z1Z3 1794 aa16.58■□□□□ 0.24
PFDN5-201ENST00000243040 RSPH4AQ5TD94 716 aa16.57■□□□□ 0.24
PFDN5-201ENST00000243040 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
PFDN5-201ENST00000243040 RIMS1Q86UR5 1692 aaKnown RBP16.55■□□□□ 0.24
PFDN5-201ENST00000243040 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
PFDN5-201ENST00000243040 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
PFDN5-201ENST00000243040 ARID4BQ4LE39 1312 aaPredicted RBP16.53■□□□□ 0.24
PFDN5-201ENST00000243040 A2MP01023 1474 aa16.53■□□□□ 0.24
PFDN5-201ENST00000243040 SHANK2Q9UPX8 1470 aa16.53■□□□□ 0.24
PFDN5-201ENST00000243040 PTPRMP28827 1452 aa16.49■□□□□ 0.23
PFDN5-201ENST00000243040 ABCC5O15440 1437 aa16.48■□□□□ 0.23
PFDN5-201ENST00000243040 DAPK1P53355 1430 aa16.48■□□□□ 0.23
PFDN5-201ENST00000243040 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
PFDN5-201ENST00000243040 TSPY4P0CV99 314 aa16.46■□□□□ 0.23
PFDN5-201ENST00000243040 TSPY10P0CW01 314 aa16.46■□□□□ 0.23
PFDN5-201ENST00000243040 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
PFDN5-201ENST00000243040 DHX29Q7Z478 1369 aaKnown RBP16.45■□□□□ 0.22
PFDN5-201ENST00000243040 RNF17Q9BXT8 1623 aaKnown RBP16.43■□□□□ 0.22
PFDN5-201ENST00000243040 DUOX2Q9NRD8 1548 aa16.43■□□□□ 0.22
PFDN5-201ENST00000243040 FAM135AQ9P2D6 1515 aa16.43■□□□□ 0.22
PFDN5-201ENST00000243040 ADGRL2O95490 1459 aa16.42■□□□□ 0.22
PFDN5-201ENST00000243040 MLECQ14165 292 aa16.42■□□□□ 0.22
PFDN5-201ENST00000243040 C3P01024 1663 aa16.42■□□□□ 0.22
PFDN5-201ENST00000243040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.41■□□□□ 0.22
PFDN5-201ENST00000243040 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
PFDN5-201ENST00000243040 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
PFDN5-201ENST00000243040 RRBP1Q9P2E9 1410 aaKnown RBP16.39■□□□□ 0.21
PFDN5-201ENST00000243040 ERBINQ96RT1 1412 aa16.37■□□□□ 0.21
PFDN5-201ENST00000243040 ZC3H13Q5T200 1668 aaKnown RBP16.37■□□□□ 0.21
PFDN5-201ENST00000243040 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
PFDN5-201ENST00000243040 DEPDC5O75140 1603 aa16.37■□□□□ 0.21
PFDN5-201ENST00000243040 MROH1Q8NDA8 1641 aa16.37■□□□□ 0.21
PFDN5-201ENST00000243040 KIF15Q9NS87 1388 aa16.37■□□□□ 0.21
PFDN5-201ENST00000243040 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
PFDN5-201ENST00000243040 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms