RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 AMOTL1Q8IY63 956 aa9.43□□□□□ -0.9
MED28-201ENST00000237380 CARD11Q9BXL7 1154 aa9.43□□□□□ -0.9
MED28-201ENST00000237380 PRM3Q9NNZ6 103 aa9.43□□□□□ -0.9
MED28-201ENST00000237380 CEP89Q96ST8 783 aa9.42□□□□□ -0.9
MED28-201ENST00000237380 EIF4G1Q04637 1599 aaKnown RBP9.42□□□□□ -0.9
MED28-201ENST00000237380 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
MED28-201ENST00000237380 KIF3AQ9Y496 699 aa9.41□□□□□ -0.9
MED28-201ENST00000237380 LAS1LQ9Y4W2 734 aaKnown RBP9.41□□□□□ -0.9
MED28-201ENST00000237380 TAF7LQ5H9L4 462 aa9.41□□□□□ -0.9
MED28-201ENST00000237380 UACAQ9BZF9 1416 aa9.4□□□□□ -0.9
MED28-201ENST00000237380 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
MED28-201ENST00000237380 NAP1L2Q9ULW6 460 aaPredicted RBP9.4□□□□□ -0.9
MED28-201ENST00000237380 MEX3CQ5U5Q3 659 aaKnown RBP9.4□□□□□ -0.9
MED28-201ENST00000237380 SALL2Q9Y467 1007 aaPredicted RBP9.4□□□□□ -0.9
MED28-201ENST00000237380 LMOD3Q0VAK6 560 aa9.4□□□□□ -0.91
MED28-201ENST00000237380 TNIKQ9UKE5 1360 aa9.39□□□□□ -0.91
MED28-201ENST00000237380 ABCC8Q09428 1581 aa9.39□□□□□ -0.91
MED28-201ENST00000237380 NOL10Q9BSC4 688 aaKnown RBP9.39□□□□□ -0.91
MED28-201ENST00000237380 GORABQ5T7V8 394 aa9.38□□□□□ -0.91
MED28-201ENST00000237380 NOC3LQ8WTT2 800 aaKnown RBP9.38□□□□□ -0.91
MED28-201ENST00000237380 TRIM34Q9BYJ4 488 aa9.38□□□□□ -0.91
MED28-201ENST00000237380 RGL3Q3MIN7 710 aa9.38□□□□□ -0.91
MED28-201ENST00000237380 CTDP1Q9Y5B0 961 aaPredicted RBP9.38□□□□□ -0.91
MED28-201ENST00000237380 TCEAL9Q9UHQ7 104 aa9.37□□□□□ -0.91
MED28-201ENST00000237380 HSP90AB1P08238 724 aaKnown RBP9.37□□□□□ -0.91
MED28-201ENST00000237380 FKBP8Q14318 412 aa9.37□□□□□ -0.91
MED28-201ENST00000237380 GTF2E1P29083 439 aaPredicted RBP9.37□□□□□ -0.91
MED28-201ENST00000237380 DDX10Q13206 875 aaKnown RBP9.37□□□□□ -0.91
MED28-201ENST00000237380 EFCAB2Q5VUJ9 269 aa9.37□□□□□ -0.91
MED28-201ENST00000237380 SMC4Q9NTJ3 1288 aa9.36□□□□□ -0.91
MED28-201ENST00000237380 TIMELESSQ9UNS1 1208 aa9.36□□□□□ -0.91
MED28-201ENST00000237380 TERF2IPQ9NYB0 399 aa9.36□□□□□ -0.91
MED28-201ENST00000237380 PAK3O75914 559 aaPredicted RBP9.36□□□□□ -0.91
MED28-201ENST00000237380 U2SURPO15042 1029 aaKnown RBP9.36□□□□□ -0.91
MED28-201ENST00000237380 HSP90B1P14625 803 aaKnown RBP9.36□□□□□ -0.91
MED28-201ENST00000237380 RRP7BPQ9NSQ0 103 aa9.35□□□□□ -0.91
MED28-201ENST00000237380 NCBP3Q53F19 620 aaKnown RBP9.35□□□□□ -0.91
MED28-201ENST00000237380 CWC22Q9HCG8 908 aaKnown RBP9.35□□□□□ -0.91
MED28-201ENST00000237380 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
MED28-201ENST00000237380 EVA1CP58658 441 aa9.34□□□□□ -0.91
MED28-201ENST00000237380 STK31Q9BXU1 1019 aa9.34□□□□□ -0.91
MED28-201ENST00000237380 HMMRO75330 724 aa9.33□□□□□ -0.92
MED28-201ENST00000237380 MLECQ14165 292 aa9.33□□□□□ -0.92
MED28-201ENST00000237380 FMN1Q68DA7 1419 aa9.33□□□□□ -0.92
MED28-201ENST00000237380 MORC1Q86VD1 984 aa9.33□□□□□ -0.92
MED28-201ENST00000237380 TPM2P07951 284 aa9.32□□□□□ -0.92
MED28-201ENST00000237380 HSCBQ8IWL3 235 aa9.32□□□□□ -0.92
MED28-201ENST00000237380 FRAT2O75474 233 aaPredicted RBP9.32□□□□□ -0.92
MED28-201ENST00000237380 SF3B2Q13435 895 aaKnown RBP9.31□□□□□ -0.92
MED28-201ENST00000237380 CNKSR2Q8WXI2 1034 aa9.31□□□□□ -0.92
MED28-201ENST00000237380 SETD5Q9C0A6 1442 aa9.31□□□□□ -0.92
MED28-201ENST00000237380 ARHGAP35Q9NRY4 1499 aa9.31□□□□□ -0.92
MED28-201ENST00000237380 ERICH6BQ5W0A0 696 aa9.3□□□□□ -0.92
MED28-201ENST00000237380 CCDC18Q5T9S5 1454 aa9.3□□□□□ -0.92
MED28-201ENST00000237380 MARCH6O60337 910 aa9.3□□□□□ -0.92
MED28-201ENST00000237380 WWC2Q6AWC2 1192 aa9.29□□□□□ -0.92
MED28-201ENST00000237380 ANKRD30AQ9BXX3 1397 aa9.29□□□□□ -0.92
MED28-201ENST00000237380 DRC7Q8IY82 874 aa9.28□□□□□ -0.92
MED28-201ENST00000237380 NGDNQ8NEJ9 315 aaKnown RBP9.28□□□□□ -0.92
MED28-201ENST00000237380 PHLDB1Q86UU1 1377 aa9.28□□□□□ -0.92
MED28-201ENST00000237380 GOLGA6L1Q8N7Z2 621 aa9.28□□□□□ -0.92
MED28-201ENST00000237380 TSR1Q2NL82 804 aaKnown RBP9.27□□□□□ -0.93
MED28-201ENST00000237380 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.27□□□□□ -0.93
MED28-201ENST00000237380 RASSF8Q8NHQ8 419 aa9.27□□□□□ -0.93
MED28-201ENST00000237380 C1orf141Q5JVX7 400 aa9.27□□□□□ -0.93
MED28-201ENST00000237380 GGT6Q6P531 493 aa9.27□□□□□ -0.93
MED28-201ENST00000237380 A0A0U1RQG5 324 aaPredicted RBP9.27□□□□□ -0.93
MED28-201ENST00000237380 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
MED28-201ENST00000237380 PHF14O94880 888 aa9.26□□□□□ -0.93
MED28-201ENST00000237380 AKAP17AQ02040 695 aaKnown RBP9.26□□□□□ -0.93
MED28-201ENST00000237380 PHF23Q9BUL5 403 aaPredicted RBP9.26□□□□□ -0.93
MED28-201ENST00000237380 KTN1Q86UP2 1357 aaKnown RBP9.26□□□□□ -0.93
MED28-201ENST00000237380 AMPHP49418 695 aa9.26□□□□□ -0.93
MED28-201ENST00000237380 CHMP3Q9Y3E7 222 aa9.25□□□□□ -0.93
MED28-201ENST00000237380 SYNE3Q6ZMZ3 975 aa9.24□□□□□ -0.93
MED28-201ENST00000237380 CARMIL1Q5VZK9 1371 aa9.24□□□□□ -0.93
MED28-201ENST00000237380 PLCB2Q00722 1185 aa9.24□□□□□ -0.93
MED28-201ENST00000237380 VPS53Q5VIR6 699 aa9.24□□□□□ -0.93
MED28-201ENST00000237380 CPLX2Q6PUV4 134 aaKnown RBP9.24□□□□□ -0.93
MED28-201ENST00000237380 WASHC2CQ9Y4E1 1318 aa9.24□□□□□ -0.93
MED28-201ENST00000237380 CCDC70Q6NSX1 233 aa9.24□□□□□ -0.93
MED28-201ENST00000237380 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
MED28-201ENST00000237380 CUX2O14529 1486 aa9.24□□□□□ -0.93
MED28-201ENST00000237380 MSNP26038 577 aaKnown RBP9.24□□□□□ -0.93
MED28-201ENST00000237380 FRAT1Q92837 279 aaPredicted RBP9.23□□□□□ -0.93
MED28-201ENST00000237380 RDXP35241 583 aaKnown RBP9.23□□□□□ -0.93
MED28-201ENST00000237380 NEXNQ0ZGT2 675 aa9.23□□□□□ -0.93
MED28-201ENST00000237380 DCAF11Q8TEB1 546 aa9.23□□□□□ -0.93
MED28-201ENST00000237380 TPM1P09493 284 aa9.23□□□□□ -0.93
MED28-201ENST00000237380 GBP4Q96PP9 640 aa9.23□□□□□ -0.93
MED28-201ENST00000237380 HOOK1Q9UJC3 728 aaKnown RBP9.23□□□□□ -0.93
MED28-201ENST00000237380 TPM3P06753 285 aa9.23□□□□□ -0.93
MED28-201ENST00000237380 PMFBP1Q8TBY8 1022 aa9.23□□□□□ -0.93
MED28-201ENST00000237380 WDHD1O75717 1129 aaPredicted RBP9.23□□□□□ -0.93
MED28-201ENST00000237380 R3HCC1Q9Y3T6 440 aaKnown RBP9.22□□□□□ -0.93
MED28-201ENST00000237380 MSH5O43196 834 aa9.22□□□□□ -0.93
MED28-201ENST00000237380 CCDC43Q96MW1 224 aaKnown RBP9.22□□□□□ -0.93
MED28-201ENST00000237380 RALBP1Q15311 655 aa9.22□□□□□ -0.93
MED28-201ENST00000237380 NEUROD2Q15784 382 aa9.22□□□□□ -0.93
MED28-201ENST00000237380 TTC5Q8N0Z6 440 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms