RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TRIM52Q96A61 297 aa31.1■■■□□ 2.57
SMARCD2-201ENST00000225742 MPHOSPH9Q99550 1183 aa31.07■■■□□ 2.56
SMARCD2-201ENST00000225742 ARID3CA6NKF2 412 aa31.06■■■□□ 2.56
SMARCD2-201ENST00000225742 ANP32CO43423 234 aa31.03■■■□□ 2.56
SMARCD2-201ENST00000225742 ADGBQ8N7X0 1667 aa30.99■■■□□ 2.55
SMARCD2-201ENST00000225742 PRG4Q92954 1404 aaPredicted RBP30.98■■■□□ 2.55
SMARCD2-201ENST00000225742 CAMSAP2Q08AD1 1489 aa30.97■■■□□ 2.55
SMARCD2-201ENST00000225742 PLB1Q6P1J6 1458 aa30.97■■■□□ 2.55
SMARCD2-201ENST00000225742 HIRIP3Q9BW71 556 aaPredicted RBP30.96■■■□□ 2.55
SMARCD2-201ENST00000225742 JPH4Q96JJ6 628 aa30.96■■■□□ 2.55
SMARCD2-201ENST00000225742 KCNH8Q96L42 1107 aa30.96■■■□□ 2.55
SMARCD2-201ENST00000225742 GPATCH8Q9UKJ3 1502 aaKnown RBP30.95■■■□□ 2.55
SMARCD2-201ENST00000225742 ANKRD30BQ9BXX2 1392 aa30.93■■■□□ 2.54
SMARCD2-201ENST00000225742 ADGRL2O95490 1459 aa30.93■■■□□ 2.54
SMARCD2-201ENST00000225742 ABCA8O94911 1581 aa30.92■■■□□ 2.54
SMARCD2-201ENST00000225742 CROCC2H7BZ55 1655 aa30.92■■■□□ 2.54
SMARCD2-201ENST00000225742 RPRD2Q5VT52 1461 aaKnown RBP30.91■■■□□ 2.54
SMARCD2-201ENST00000225742 ZNF644Q9H582 1327 aaPredicted RBP30.91■■■□□ 2.54
SMARCD2-201ENST00000225742 CFDP1Q9UEE9 299 aaPredicted RBP30.9■■■□□ 2.54
SMARCD2-201ENST00000225742 KIF14Q15058 1648 aa30.89■■■□□ 2.54
SMARCD2-201ENST00000225742 SUPT16HQ9Y5B9 1047 aaKnown RBP30.89■■■□□ 2.53
SMARCD2-201ENST00000225742 FBLN2P98095 1184 aa30.87■■■□□ 2.53
SMARCD2-201ENST00000225742 NCOA1Q15788 1441 aa30.85■■■□□ 2.53
SMARCD2-201ENST00000225742 EIF4G2P78344 907 aaKnown RBP eCLIP30.84■■■□□ 2.53
SMARCD2-201ENST00000225742 L3MBTL2Q969R5 705 aa30.82■■■□□ 2.52
SMARCD2-201ENST00000225742 HSPA5P11021 654 aaKnown RBP30.82■■■□□ 2.52
SMARCD2-201ENST00000225742 TEX14Q8IWB6 1497 aa30.81■■■□□ 2.52
SMARCD2-201ENST00000225742 PZPP20742 1482 aa30.79■■■□□ 2.52
SMARCD2-201ENST00000225742 SLC4A1APQ9BWU0 796 aaKnown RBP30.79■■■□□ 2.52
SMARCD2-201ENST00000225742 ABCC10Q5T3U5 1492 aa30.79■■■□□ 2.52
SMARCD2-201ENST00000225742 ANKRD30AQ9BXX3 1397 aa30.78■■■□□ 2.52
SMARCD2-201ENST00000225742 PLEKHD1A6NEE1 506 aa30.78■■■□□ 2.52
SMARCD2-201ENST00000225742 SHANK2Q9UPX8 1470 aa30.78■■■□□ 2.52
SMARCD2-201ENST00000225742 CDC42BPAQ5VT25 1732 aa30.78■■■□□ 2.52
SMARCD2-201ENST00000225742 ATP10BO94823 1461 aa30.77■■■□□ 2.52
SMARCD2-201ENST00000225742 FOXD1Q16676 465 aa30.73■■■□□ 2.51
SMARCD2-201ENST00000225742 WASHC2AQ641Q2 1341 aa30.72■■■□□ 2.51
SMARCD2-201ENST00000225742 KIAA1107Q9UPP5 1409 aa30.7■■■□□ 2.5
SMARCD2-201ENST00000225742 CNTLNQ9NXG0 1405 aa30.67■■■□□ 2.5
SMARCD2-201ENST00000225742 POLR1AO95602 1720 aaPredicted RBP30.66■■■□□ 2.5
SMARCD2-201ENST00000225742 ZNF777Q9ULD5 760 aaPredicted RBP30.66■■■□□ 2.5
SMARCD2-201ENST00000225742 ARHGEF5Q12774 1597 aa30.65■■■□□ 2.5
SMARCD2-201ENST00000225742 ANKRD50Q9ULJ7 1429 aa30.64■■■□□ 2.5
SMARCD2-201ENST00000225742 PTPRGP23470 1445 aa30.62■■■□□ 2.49
SMARCD2-201ENST00000225742 CCDC7Q96M83 1385 aa30.62■■■□□ 2.49
SMARCD2-201ENST00000225742 KDM5DQ9BY66 1539 aa30.61■■■□□ 2.49
SMARCD2-201ENST00000225742 MBD5Q9P267 1494 aa30.61■■■□□ 2.49
SMARCD2-201ENST00000225742 C9orf84Q5VXU9 1444 aa30.61■■■□□ 2.49
SMARCD2-201ENST00000225742 NBPF8Q3BBV2 869 aa30.61■■■□□ 2.49
SMARCD2-201ENST00000225742 SPATA31E1Q6ZUB1 1445 aa30.6■■■□□ 2.49
SMARCD2-201ENST00000225742 SHROOM2Q13796 1616 aa30.54■■■□□ 2.48
SMARCD2-201ENST00000225742 TSPY4P0CV99 314 aa30.53■■■□□ 2.48
SMARCD2-201ENST00000225742 TSPY10P0CW01 314 aa30.53■■■□□ 2.48
SMARCD2-201ENST00000225742 CHD1O14646 1710 aa30.52■■■□□ 2.48
SMARCD2-201ENST00000225742 PREX2Q70Z35 1606 aa30.52■■■□□ 2.48
SMARCD2-201ENST00000225742 PKD2Q13563 968 aa30.52■■■□□ 2.48
SMARCD2-201ENST00000225742 RSPH4AQ5TD94 716 aa30.51■■■□□ 2.47
SMARCD2-201ENST00000225742 NEFLP07196 543 aa30.48■■■□□ 2.47
SMARCD2-201ENST00000225742 ARHGEF12Q9NZN5 1544 aa30.47■■■□□ 2.47
SMARCD2-201ENST00000225742 CDC42BPBQ9Y5S2 1711 aa30.46■■■□□ 2.47
SMARCD2-201ENST00000225742 CCDC141Q6ZP82 1450 aa30.46■■■□□ 2.47
SMARCD2-201ENST00000225742 UHRF1BP1Q6BDS2 1440 aa30.46■■■□□ 2.47
SMARCD2-201ENST00000225742 NUP155O75694 1391 aa30.45■■■□□ 2.47
SMARCD2-201ENST00000225742 C11orf95C9JLR9 678 aaPredicted RBP30.45■■■□□ 2.47
SMARCD2-201ENST00000225742 SAMD9LQ8IVG5 1584 aa30.44■■■□□ 2.46
SMARCD2-201ENST00000225742 KIF15Q9NS87 1388 aa30.43■■■□□ 2.46
SMARCD2-201ENST00000225742 FKBP8Q14318 412 aa30.43■■■□□ 2.46
SMARCD2-201ENST00000225742 KIF7Q2M1P5 1343 aa30.41■■■□□ 2.46
SMARCD2-201ENST00000225742 MAST1Q9Y2H9 1570 aa30.41■■■□□ 2.46
SMARCD2-201ENST00000225742 ARID4BQ4LE39 1312 aaPredicted RBP30.4■■■□□ 2.46
SMARCD2-201ENST00000225742 PRKRIP1Q9H875 184 aaPredicted RBP30.4■■■□□ 2.46
SMARCD2-201ENST00000225742 RALGAPBQ86X10 1494 aa30.37■■■□□ 2.45
SMARCD2-201ENST00000225742 HNRNPMP52272 730 aaKnown RBP eCLIP30.36■■■□□ 2.45
SMARCD2-201ENST00000225742 KDM5CP41229 1560 aa30.35■■■□□ 2.45
SMARCD2-201ENST00000225742 ABCC2Q92887 1545 aa30.34■■■□□ 2.45
SMARCD2-201ENST00000225742 HNRNPUQ00839 825 aaKnown RBP eCLIP30.34■■■□□ 2.45
SMARCD2-201ENST00000225742 USP47Q96K76 1375 aa30.34■■■□□ 2.45
SMARCD2-201ENST00000225742 PLEKHH2Q8IVE3 1493 aa30.33■■■□□ 2.45
SMARCD2-201ENST00000225742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.29■■■□□ 2.44
SMARCD2-201ENST00000225742 MYO5CQ9NQX4 1742 aa30.29■■■□□ 2.44
SMARCD2-201ENST00000225742 TTC37Q6PGP7 1564 aa30.28■■■□□ 2.44
SMARCD2-201ENST00000225742 UNC13BO14795 1591 aa30.27■■■□□ 2.44
SMARCD2-201ENST00000225742 FAM135AQ9P2D6 1515 aa30.27■■■□□ 2.44
SMARCD2-201ENST00000225742 BCORL1Q5H9F3 1711 aa30.27■■■□□ 2.44
SMARCD2-201ENST00000225742 ARHGAP5Q13017 1502 aa30.27■■■□□ 2.44
SMARCD2-201ENST00000225742 PLXNC1O60486 1568 aa30.26■■■□□ 2.44
SMARCD2-201ENST00000225742 ROCK2O75116 1388 aaKnown RBP30.25■■■□□ 2.43
SMARCD2-201ENST00000225742 SYCP2Q9BX26 1530 aa30.25■■■□□ 2.43
SMARCD2-201ENST00000225742 TSHZ2Q9NRE2 1034 aa30.24■■■□□ 2.43
SMARCD2-201ENST00000225742 MRS2Q9HD23 443 aa30.2■■■□□ 2.43
SMARCD2-201ENST00000225742 UHRF1BP1LA0JNW5 1464 aa30.2■■■□□ 2.42
SMARCD2-201ENST00000225742 BCANQ96GW7 911 aa30.19■■■□□ 2.42
SMARCD2-201ENST00000225742 DHX29Q7Z478 1369 aaKnown RBP30.19■■■□□ 2.42
SMARCD2-201ENST00000225742 MYT1Q01538 1121 aa30.19■■■□□ 2.42
SMARCD2-201ENST00000225742 ZNF326Q5BKZ1 582 aaKnown RBP30.18■■■□□ 2.42
SMARCD2-201ENST00000225742 CCDC184Q52MB2 194 aa30.17■■■□□ 2.42
SMARCD2-201ENST00000225742 ERCC6L2Q5T890 1561 aa30.16■■■□□ 2.42
SMARCD2-201ENST00000225742 CLASP1Q7Z460 1538 aa30.16■■■□□ 2.42
SMARCD2-201ENST00000225742 IQGAP3Q86VI3 1631 aa30.15■■■□□ 2.42
SMARCD2-201ENST00000225742 ERICH6BQ5W0A0 696 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms