RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
SF3A2-201ENST00000221494 MIA2Q96PC5 1412 aa22.46■■□□□ 1.19
SF3A2-201ENST00000221494 TCOF1Q13428 1488 aaKnown RBP22.43■■□□□ 1.18
SF3A2-201ENST00000221494 NEFLP07196 543 aa22.42■■□□□ 1.18
SF3A2-201ENST00000221494 ADCY10Q96PN6 1610 aa22.41■■□□□ 1.18
SF3A2-201ENST00000221494 KIF14Q15058 1648 aa22.41■■□□□ 1.18
SF3A2-201ENST00000221494 PTPN23Q9H3S7 1636 aa22.41■■□□□ 1.18
SF3A2-201ENST00000221494 BCL11AQ9H165 835 aa22.41■■□□□ 1.18
SF3A2-201ENST00000221494 KDM5BQ9UGL1 1544 aa22.4■■□□□ 1.18
SF3A2-201ENST00000221494 GPATCH8Q9UKJ3 1502 aaKnown RBP22.39■■□□□ 1.17
SF3A2-201ENST00000221494 ABCC10Q5T3U5 1492 aa22.38■■□□□ 1.17
SF3A2-201ENST00000221494 PTPRKQ15262 1439 aa22.38■■□□□ 1.17
SF3A2-201ENST00000221494 KCNH8Q96L42 1107 aa22.36■■□□□ 1.17
SF3A2-201ENST00000221494 FKBP8Q14318 412 aa22.36■■□□□ 1.17
SF3A2-201ENST00000221494 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
SF3A2-201ENST00000221494 DAXXQ9UER7 740 aaPredicted RBP22.35■■□□□ 1.17
SF3A2-201ENST00000221494 CFDP1Q9UEE9 299 aaPredicted RBP22.34■■□□□ 1.17
SF3A2-201ENST00000221494 ZNF644Q9H582 1327 aaPredicted RBP22.34■■□□□ 1.17
SF3A2-201ENST00000221494 ANP32CO43423 234 aa22.34■■□□□ 1.17
SF3A2-201ENST00000221494 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
SF3A2-201ENST00000221494 SIN3AQ96ST3 1273 aa22.27■■□□□ 1.15
SF3A2-201ENST00000221494 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
SF3A2-201ENST00000221494 HFM1A2PYH4 1435 aa22.25■■□□□ 1.15
SF3A2-201ENST00000221494 ZNF777Q9ULD5 760 aaPredicted RBP22.24■■□□□ 1.15
SF3A2-201ENST00000221494 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
SF3A2-201ENST00000221494 ABCC5O15440 1437 aa22.23■■□□□ 1.15
SF3A2-201ENST00000221494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.23■■□□□ 1.15
SF3A2-201ENST00000221494 DAPK1P53355 1430 aa22.22■■□□□ 1.15
SF3A2-201ENST00000221494 CHIC2Q9UKJ5 165 aa22.22■■□□□ 1.15
SF3A2-201ENST00000221494 TONSLQ96HA7 1378 aa22.21■■□□□ 1.15
SF3A2-201ENST00000221494 RBM19Q9Y4C8 960 aaKnown RBP22.21■■□□□ 1.15
SF3A2-201ENST00000221494 CDC42BPAQ5VT25 1732 aa22.21■■□□□ 1.15
SF3A2-201ENST00000221494 NAIPQ13075 1403 aa22.21■■□□□ 1.15
SF3A2-201ENST00000221494 ERICH6BQ5W0A0 696 aa22.2■■□□□ 1.14
SF3A2-201ENST00000221494 TTC37Q6PGP7 1564 aa22.18■■□□□ 1.14
SF3A2-201ENST00000221494 WDR7Q9Y4E6 1490 aa22.18■■□□□ 1.14
SF3A2-201ENST00000221494 DNMT1P26358 1616 aaKnown RBP22.18■■□□□ 1.14
SF3A2-201ENST00000221494 BCANQ96GW7 911 aa22.18■■□□□ 1.14
SF3A2-201ENST00000221494 AKNAQ7Z591 1439 aa22.17■■□□□ 1.14
SF3A2-201ENST00000221494 NPM1P06748 294 aaKnown RBP eCLIP22.16■■□□□ 1.14
SF3A2-201ENST00000221494 RRP7BPQ9NSQ0 103 aa22.16■■□□□ 1.14
SF3A2-201ENST00000221494 ASXL2Q76L83 1435 aa22.15■■□□□ 1.14
SF3A2-201ENST00000221494 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
SF3A2-201ENST00000221494 PREX2Q70Z35 1606 aa22.14■■□□□ 1.13
SF3A2-201ENST00000221494 PLCH2O75038 1416 aa22.13■■□□□ 1.13
SF3A2-201ENST00000221494 FANCIQ9NVI1 1328 aa22.12■■□□□ 1.13
SF3A2-201ENST00000221494 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
SF3A2-201ENST00000221494 CDC42BPBQ9Y5S2 1711 aa22.11■■□□□ 1.13
SF3A2-201ENST00000221494 MBD5Q9P267 1494 aa22.1■■□□□ 1.13
SF3A2-201ENST00000221494 GCC2Q8IWJ2 1684 aa22.1■■□□□ 1.13
SF3A2-201ENST00000221494 HNRNPMP52272 730 aaKnown RBP eCLIP22.1■■□□□ 1.139e-7■■□□□ 12.9
SF3A2-201ENST00000221494 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
SF3A2-201ENST00000221494 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
SF3A2-201ENST00000221494 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
SF3A2-201ENST00000221494 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
SF3A2-201ENST00000221494 SAMD9LQ8IVG5 1584 aa22.09■■□□□ 1.13
SF3A2-201ENST00000221494 EFCAB2Q5VUJ9 269 aa22.07■■□□□ 1.12
SF3A2-201ENST00000221494 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
SF3A2-201ENST00000221494 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
SF3A2-201ENST00000221494 RSPH4AQ5TD94 716 aa22.05■■□□□ 1.12
SF3A2-201ENST00000221494 ADGRL2O95490 1459 aa22.05■■□□□ 1.12
SF3A2-201ENST00000221494 KIAA1107Q9UPP5 1409 aa22.04■■□□□ 1.12
SF3A2-201ENST00000221494 MYO5CQ9NQX4 1742 aa22.04■■□□□ 1.12
SF3A2-201ENST00000221494 ARHGEF5Q12774 1597 aa22.04■■□□□ 1.12
SF3A2-201ENST00000221494 TSPY4P0CV99 314 aa22.03■■□□□ 1.12
SF3A2-201ENST00000221494 TSPY10P0CW01 314 aa22.03■■□□□ 1.12
SF3A2-201ENST00000221494 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
SF3A2-201ENST00000221494 ARAP3Q8WWN8 1544 aa22.02■■□□□ 1.11
SF3A2-201ENST00000221494 PLEKHH2Q8IVE3 1493 aa22.01■■□□□ 1.11
SF3A2-201ENST00000221494 C9orf84Q5VXU9 1444 aa22.01■■□□□ 1.11
SF3A2-201ENST00000221494 ANKRD30AQ9BXX3 1397 aa22.01■■□□□ 1.11
SF3A2-201ENST00000221494 ABCA9Q8IUA7 1624 aa22■■□□□ 1.11
SF3A2-201ENST00000221494 CCDC141Q6ZP82 1450 aa22■■□□□ 1.11
SF3A2-201ENST00000221494 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
SF3A2-201ENST00000221494 KDM6BO15054 1643 aa22■■□□□ 1.11
SF3A2-201ENST00000221494 CROCC2H7BZ55 1655 aa22■■□□□ 1.11
SF3A2-201ENST00000221494 SYCP2Q9BX26 1530 aa21.99■■□□□ 1.11
SF3A2-201ENST00000221494 ARHGEF12Q9NZN5 1544 aa21.98■■□□□ 1.11
SF3A2-201ENST00000221494 POLR1AO95602 1720 aaPredicted RBP21.98■■□□□ 1.11
SF3A2-201ENST00000221494 CNTLNQ9NXG0 1405 aa21.95■■□□□ 1.1
SF3A2-201ENST00000221494 ADGBQ8N7X0 1667 aa21.93■■□□□ 1.1
SF3A2-201ENST00000221494 ABCC1P33527 1531 aa21.93■■□□□ 1.1
SF3A2-201ENST00000221494 FANCAO15360 1455 aa21.93■■□□□ 1.1
SF3A2-201ENST00000221494 HIRIP3Q9BW71 556 aaPredicted RBP21.92■■□□□ 1.1
SF3A2-201ENST00000221494 HNRNPUQ00839 825 aaKnown RBP eCLIP21.92■■□□□ 1.1
SF3A2-201ENST00000221494 ANKRD50Q9ULJ7 1429 aa21.9■■□□□ 1.1
SF3A2-201ENST00000221494 TRAPPC8Q9Y2L5 1435 aa21.9■■□□□ 1.1
SF3A2-201ENST00000221494 PPP4R2Q9NY27 417 aa21.9■■□□□ 1.1
SF3A2-201ENST00000221494 KIF15Q9NS87 1388 aa21.9■■□□□ 1.1
SF3A2-201ENST00000221494 CD109Q6YHK3 1445 aa21.9■■□□□ 1.1
SF3A2-201ENST00000221494 MAST1Q9Y2H9 1570 aa21.88■■□□□ 1.09
SF3A2-201ENST00000221494 MPHOSPH9Q99550 1183 aa21.87■■□□□ 1.09
SF3A2-201ENST00000221494 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
SF3A2-201ENST00000221494 MSH5O43196 834 aa21.87■■□□□ 1.09
SF3A2-201ENST00000221494 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
SF3A2-201ENST00000221494 AFAP1Q8N556 730 aa21.86■■□□□ 1.09
SF3A2-201ENST00000221494 EIF4G2P78344 907 aaKnown RBP eCLIP21.85■■□□□ 1.09
SF3A2-201ENST00000221494 SCAPERQ9BY12 1400 aa21.83■■□□□ 1.08
SF3A2-201ENST00000221494 HSPA5P11021 654 aaKnown RBP21.83■■□□□ 1.08
SF3A2-201ENST00000221494 ADGRL1O94910 1474 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms