RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CAMSAP2Q08AD1 1489 aa43.14■■■■■ 4.5
PABPN1-201ENST00000216727 ABCC10Q5T3U5 1492 aa43.13■■■■■ 4.5
PABPN1-201ENST00000216727 SIN3AQ96ST3 1273 aa43.11■■■■■ 4.49
PABPN1-201ENST00000216727 ACIN1Q9UKV3 1341 aaKnown RBP43.08■■■■■ 4.49
PABPN1-201ENST00000216727 ERCC6L2Q5T890 1561 aa43.07■■■■■ 4.49
PABPN1-201ENST00000216727 CDC42BPAQ5VT25 1732 aa43.04■■■■■ 4.48
PABPN1-201ENST00000216727 KDM6BO15054 1643 aa43.02■■■■■ 4.48
PABPN1-201ENST00000216727 NEUROD1Q13562 356 aa43.02■■■■■ 4.48
PABPN1-201ENST00000216727 ABCC2Q92887 1545 aa43■■■■■ 4.47
PABPN1-201ENST00000216727 CROCC2H7BZ55 1655 aa42.93■■■■■ 4.46
PABPN1-201ENST00000216727 ADGBQ8N7X0 1667 aa42.91■■■■■ 4.46
PABPN1-201ENST00000216727 ADGRL2O95490 1459 aa42.9■■■■■ 4.46
PABPN1-201ENST00000216727 ZNF777Q9ULD5 760 aaPredicted RBP42.88■■■■■ 4.46
PABPN1-201ENST00000216727 DENND4BO75064 1496 aaPredicted RBP42.87■■■■■ 4.45
PABPN1-201ENST00000216727 NCOA1Q15788 1441 aa42.85■■■■■ 4.45
PABPN1-201ENST00000216727 TRIM52Q96A61 297 aa42.85■■■■■ 4.45
PABPN1-201ENST00000216727 UHRF1BP1LA0JNW5 1464 aa42.84■■■■■ 4.45
PABPN1-201ENST00000216727 PPP1R15AO75807 674 aaPredicted RBP42.81■■■■■ 4.44
PABPN1-201ENST00000216727 SHANK2Q9UPX8 1470 aa42.81■■■■■ 4.44
PABPN1-201ENST00000216727 TONSLQ96HA7 1378 aa42.79■■■■■ 4.44
PABPN1-201ENST00000216727 PREX2Q70Z35 1606 aa42.78■■■■■ 4.44
PABPN1-201ENST00000216727 MPHOSPH9Q99550 1183 aa42.78■■■■■ 4.44
PABPN1-201ENST00000216727 ANKRD30AQ9BXX3 1397 aa42.74■■■■■ 4.43
PABPN1-201ENST00000216727 ARHGEF5Q12774 1597 aa42.73■■■■■ 4.43
PABPN1-201ENST00000216727 CDC42BPBQ9Y5S2 1711 aa42.72■■■■■ 4.43
PABPN1-201ENST00000216727 KDM5BQ9UGL1 1544 aa42.7■■■■■ 4.43
PABPN1-201ENST00000216727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.68■■■■■ 4.423e-15■□□□□ 10.2
PABPN1-201ENST00000216727 ZCCHC11Q5TAX3 1644 aaKnown RBP42.66■■■■■ 4.42
PABPN1-201ENST00000216727 C9orf84Q5VXU9 1444 aa42.66■■■■■ 4.42
PABPN1-201ENST00000216727 MBD5Q9P267 1494 aa42.65■■■■■ 4.42
PABPN1-201ENST00000216727 TTC37Q6PGP7 1564 aa42.65■■■■■ 4.42
PABPN1-201ENST00000216727 SAMD9LQ8IVG5 1584 aa42.65■■■■■ 4.42
PABPN1-201ENST00000216727 MIER1Q8N108 512 aa42.59■■■■■ 4.41
PABPN1-201ENST00000216727 RSPH4AQ5TD94 716 aa42.59■■■■■ 4.41
PABPN1-201ENST00000216727 TSPY4P0CV99 314 aa42.58■■■■■ 4.41
PABPN1-201ENST00000216727 TSPY10P0CW01 314 aa42.58■■■■■ 4.41
PABPN1-201ENST00000216727 ANKRD50Q9ULJ7 1429 aa42.56■■■■■ 4.4
PABPN1-201ENST00000216727 CCDC141Q6ZP82 1450 aa42.56■■■■■ 4.4
PABPN1-201ENST00000216727 MYO5CQ9NQX4 1742 aa42.55■■■■■ 4.4
PABPN1-201ENST00000216727 ANKRD30BQ9BXX2 1392 aa42.54■■■■■ 4.4
PABPN1-201ENST00000216727 PZPP20742 1482 aa42.53■■■■■ 4.4
PABPN1-201ENST00000216727 HNRNPMP52272 730 aaKnown RBP eCLIP42.53■■■■■ 4.4
PABPN1-201ENST00000216727 ARHGAP5Q13017 1502 aa42.52■■■■■ 4.4
PABPN1-201ENST00000216727 SLC4A1APQ9BWU0 796 aaKnown RBP42.51■■■■■ 4.4
PABPN1-201ENST00000216727 PLEKHH2Q8IVE3 1493 aa42.47■■■■■ 4.39
PABPN1-201ENST00000216727 KIAA1107Q9UPP5 1409 aa42.45■■■■■ 4.39
PABPN1-201ENST00000216727 RPRD2Q5VT52 1461 aaKnown RBP42.42■■■■■ 4.38
PABPN1-201ENST00000216727 FOXD1Q16676 465 aa42.42■■■■■ 4.38
PABPN1-201ENST00000216727 SYCP2Q9BX26 1530 aa42.42■■■■■ 4.38
PABPN1-201ENST00000216727 PLCH2O75038 1416 aa42.41■■■■■ 4.38
PABPN1-201ENST00000216727 MAST1Q9Y2H9 1570 aa42.41■■■■■ 4.38
PABPN1-201ENST00000216727 KCNH8Q96L42 1107 aa42.41■■■■■ 4.38
PABPN1-201ENST00000216727 KIF15Q9NS87 1388 aa42.41■■■■■ 4.38
PABPN1-201ENST00000216727 OSCARQ8IYS5 282 aa42.36■■■■■ 4.37
PABPN1-201ENST00000216727 KDM5DQ9BY66 1539 aa42.36■■■■■ 4.37
PABPN1-201ENST00000216727 ARAP3Q8WWN8 1544 aa42.29■■■■■ 4.36
PABPN1-201ENST00000216727 EFCAB2Q5VUJ9 269 aa42.27■■■■■ 4.36
PABPN1-201ENST00000216727 WDR7Q9Y4E6 1490 aa42.27■■■■■ 4.36
PABPN1-201ENST00000216727 L3MBTL2Q969R5 705 aa42.25■■■■■ 4.35
PABPN1-201ENST00000216727 NUP155O75694 1391 aa42.25■■■■■ 4.35
PABPN1-201ENST00000216727 CENPBP07199 599 aaPredicted RBP42.24■■■■■ 4.35
PABPN1-201ENST00000216727 TEX14Q8IWB6 1497 aa42.24■■■■■ 4.35
PABPN1-201ENST00000216727 PLXNC1O60486 1568 aa42.23■■■■■ 4.35
PABPN1-201ENST00000216727 ARHGEF12Q9NZN5 1544 aa42.22■■■■■ 4.35
PABPN1-201ENST00000216727 PKD2Q13563 968 aa42.21■■■■■ 4.35
PABPN1-201ENST00000216727 ABCC1P33527 1531 aa42.2■■■■■ 4.35
PABPN1-201ENST00000216727 ABCA9Q8IUA7 1624 aa42.1■■■■■ 4.33
PABPN1-201ENST00000216727 HIRIP3Q9BW71 556 aaPredicted RBP42.08■■■■■ 4.33
PABPN1-201ENST00000216727 UNC13BO14795 1591 aa42.07■■■■■ 4.32
PABPN1-201ENST00000216727 DUOX2Q9NRD8 1548 aa42.06■■■■■ 4.32
PABPN1-201ENST00000216727 ASXL2Q76L83 1435 aa42.04■■■■■ 4.32
PABPN1-201ENST00000216727 DDX10Q13206 875 aaKnown RBP42.03■■■■■ 4.32
PABPN1-201ENST00000216727 FAM135AQ9P2D6 1515 aa42.03■■■■■ 4.32
PABPN1-201ENST00000216727 TRAPPC8Q9Y2L5 1435 aa42.01■■■■■ 4.32
PABPN1-201ENST00000216727 ERBINQ96RT1 1412 aa41.99■■■■■ 4.31
PABPN1-201ENST00000216727 RTEL1-TNFRSF6BF6WH68 1400 aa41.96■■■■■ 4.31
PABPN1-201ENST00000216727 YTHDC1Q96MU7 727 aaKnown RBP41.96■■■■■ 4.31
PABPN1-201ENST00000216727 NBPF8Q3BBV2 869 aa41.95■■■■■ 4.31
PABPN1-201ENST00000216727 EIF4G2P78344 907 aaKnown RBP eCLIP41.94■■■■■ 4.33e-7■■□□□ 12.5
PABPN1-201ENST00000216727 FANCAO15360 1455 aa41.93■■■■■ 4.3
PABPN1-201ENST00000216727 HSPA5P11021 654 aaKnown RBP41.91■■■■■ 4.3
PABPN1-201ENST00000216727 MAGI2Q86UL8 1455 aa41.91■■■■■ 4.3
PABPN1-201ENST00000216727 IQGAP3Q86VI3 1631 aa41.9■■■■■ 4.3
PABPN1-201ENST00000216727 NPM1P06748 294 aaKnown RBP eCLIP41.9■■■■■ 4.3
PABPN1-201ENST00000216727 ZFYVE16Q7Z3T8 1539 aa41.86■■■■■ 4.29
PABPN1-201ENST00000216727 SPAG9O60271 1321 aaKnown RBP41.86■■■■■ 4.29
PABPN1-201ENST00000216727 SCAF1Q9H7N4 1312 aaKnown RBP41.82■■■■■ 4.28
PABPN1-201ENST00000216727 AFAP1Q8N556 730 aa41.8■■■■■ 4.28
PABPN1-201ENST00000216727 UHRF1BP1Q6BDS2 1440 aa41.78■■■■■ 4.28
PABPN1-201ENST00000216727 ADGRL1O94910 1474 aa41.77■■■■■ 4.28
PABPN1-201ENST00000216727 INO80Q9ULG1 1556 aaPredicted RBP41.75■■■■■ 4.27
PABPN1-201ENST00000216727 SPATA31E1Q6ZUB1 1445 aa41.75■■■■■ 4.27
PABPN1-201ENST00000216727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP41.73■■■■■ 4.272e-11■□□□□ 10.7
PABPN1-201ENST00000216727 SCAPERQ9BY12 1400 aa41.72■■■■■ 4.27
PABPN1-201ENST00000216727 ATP7AQ04656 1500 aa41.71■■■■■ 4.27
PABPN1-201ENST00000216727 WASHC2AQ641Q2 1341 aa41.71■■■■■ 4.27
PABPN1-201ENST00000216727 CCDC144AA2RUR9 1427 aa41.68■■■■■ 4.26
PABPN1-201ENST00000216727 ATP10AO60312 1499 aa41.68■■■■■ 4.26
PABPN1-201ENST00000216727 PLA2R1Q13018 1463 aa41.68■■■■■ 4.26
PABPN1-201ENST00000216727 ANP32CO43423 234 aa41.64■■■■■ 4.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms