RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CERKQ8TCT0 537 aa19.33■□□□□ 0.69
SNU13-201ENST00000215956 MLECQ14165 292 aa19.33■□□□□ 0.68
SNU13-201ENST00000215956 CDK13Q14004 1512 aaKnown RBP19.32■□□□□ 0.68
SNU13-201ENST00000215956 PREX1Q8TCU6 1659 aa19.31■□□□□ 0.68
SNU13-201ENST00000215956 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
SNU13-201ENST00000215956 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
SNU13-201ENST00000215956 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
SNU13-201ENST00000215956 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
SNU13-201ENST00000215956 PLCH2O75038 1416 aa19.28■□□□□ 0.68
SNU13-201ENST00000215956 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
SNU13-201ENST00000215956 C9orf84Q5VXU9 1444 aa19.27■□□□□ 0.68
SNU13-201ENST00000215956 ATP10AO60312 1499 aa19.26■□□□□ 0.67
SNU13-201ENST00000215956 STRCQ7RTU9 1775 aa19.23■□□□□ 0.67
SNU13-201ENST00000215956 SETD1BQ9UPS6 1966 aaKnown RBP19.21■□□□□ 0.67
SNU13-201ENST00000215956 CEP162Q5TB80 1403 aa19.2■□□□□ 0.66
SNU13-201ENST00000215956 KIF14Q15058 1648 aa19.19■□□□□ 0.66
SNU13-201ENST00000215956 ZNF518AQ6AHZ1 1483 aa19.19■□□□□ 0.66
SNU13-201ENST00000215956 CEBPAP49715 358 aaPredicted RBP19.18■□□□□ 0.66
SNU13-201ENST00000215956 EFCAB2Q5VUJ9 269 aa19.18■□□□□ 0.66
SNU13-201ENST00000215956 KDM5CP41229 1560 aa19.18■□□□□ 0.66
SNU13-201ENST00000215956 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
SNU13-201ENST00000215956 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
SNU13-201ENST00000215956 FMN1Q68DA7 1419 aa19.15■□□□□ 0.66
SNU13-201ENST00000215956 DISP3Q9P2K9 1392 aa19.15■□□□□ 0.66
SNU13-201ENST00000215956 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
SNU13-201ENST00000215956 DIP2CQ9Y2E4 1556 aa19.14■□□□□ 0.66
SNU13-201ENST00000215956 REREQ9P2R6 1566 aa19.14■□□□□ 0.65
SNU13-201ENST00000215956 C3P01024 1663 aa19.13■□□□□ 0.65
SNU13-201ENST00000215956 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
SNU13-201ENST00000215956 CDK11AQ9UQ88 783 aaPredicted RBP19.12■□□□□ 0.65
SNU13-201ENST00000215956 ABCA6Q8N139 1617 aa19.12■□□□□ 0.65
SNU13-201ENST00000215956 TROQ12816 1431 aaPredicted RBP19.11■□□□□ 0.65
SNU13-201ENST00000215956 ILDR2Q71H61 639 aa19.11■□□□□ 0.65
SNU13-201ENST00000215956 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
SNU13-201ENST00000215956 LRRIQ1Q96JM4 1722 aa19.1■□□□□ 0.65
SNU13-201ENST00000215956 CDC42BPBQ9Y5S2 1711 aa19.1■□□□□ 0.65
SNU13-201ENST00000215956 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
SNU13-201ENST00000215956 MYT1LQ9UL68 1186 aa19.08■□□□□ 0.65
SNU13-201ENST00000215956 PTPRTO14522 1441 aa19.08■□□□□ 0.65
SNU13-201ENST00000215956 CLIP1P30622 1438 aa19.08■□□□□ 0.65
SNU13-201ENST00000215956 SPATA31D1Q6ZQQ2 1576 aa19.07■□□□□ 0.64
SNU13-201ENST00000215956 SOCS7O14512 581 aa19.07■□□□□ 0.64
SNU13-201ENST00000215956 MLH3Q9UHC1 1453 aa19.07■□□□□ 0.64
SNU13-201ENST00000215956 AGLP35573 1532 aa19.06■□□□□ 0.64
SNU13-201ENST00000215956 PREX2Q70Z35 1606 aa19.05■□□□□ 0.64
SNU13-201ENST00000215956 ITSN2Q9NZM3 1697 aa19.05■□□□□ 0.64
SNU13-201ENST00000215956 ABCC1P33527 1531 aa19.04■□□□□ 0.64
SNU13-201ENST00000215956 LTBP4Q8N2S1 1624 aa19.03■□□□□ 0.64
SNU13-201ENST00000215956 ESF1Q9H501 851 aaKnown RBP19.01■□□□□ 0.63
SNU13-201ENST00000215956 TRAPPC8Q9Y2L5 1435 aa19.01■□□□□ 0.63
SNU13-201ENST00000215956 KIDINS220Q9ULH0 1771 aa19.01■□□□□ 0.63
SNU13-201ENST00000215956 IQSEC2Q5JU85 1478 aa19■□□□□ 0.63
SNU13-201ENST00000215956 NCOA1Q15788 1441 aa19■□□□□ 0.63
SNU13-201ENST00000215956 CNTLNQ9NXG0 1405 aa18.98■□□□□ 0.63
SNU13-201ENST00000215956 CDC42BPAQ5VT25 1732 aa18.97■□□□□ 0.63
SNU13-201ENST00000215956 MROH2AA6NES4 1674 aa18.97■□□□□ 0.63
SNU13-201ENST00000215956 CAMSAP1Q5T5Y3 1602 aa18.95■□□□□ 0.62
SNU13-201ENST00000215956 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
SNU13-201ENST00000215956 CCDC18Q5T9S5 1454 aa18.94■□□□□ 0.62
SNU13-201ENST00000215956 NPATQ14207 1427 aa18.93■□□□□ 0.62
SNU13-201ENST00000215956 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
SNU13-201ENST00000215956 SAMD9LQ8IVG5 1584 aa18.92■□□□□ 0.62
SNU13-201ENST00000215956 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
SNU13-201ENST00000215956 CASKIN1Q8WXD9 1431 aa18.89■□□□□ 0.61
SNU13-201ENST00000215956 ZNF142P52746 1687 aaPredicted RBP18.88■□□□□ 0.61
SNU13-201ENST00000215956 MYO3AQ8NEV4 1616 aa18.88■□□□□ 0.61
SNU13-201ENST00000215956 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
SNU13-201ENST00000215956 CLTCQ00610 1675 aaKnown RBP18.88■□□□□ 0.61
SNU13-201ENST00000215956 ZMYM3Q14202 1370 aa18.87■□□□□ 0.61
SNU13-201ENST00000215956 APLP2Q06481 763 aa18.85■□□□□ 0.61
SNU13-201ENST00000215956 PLA2R1Q13018 1463 aa18.84■□□□□ 0.61
SNU13-201ENST00000215956 PLXNC1O60486 1568 aa18.84■□□□□ 0.61
SNU13-201ENST00000215956 ZNF335Q9H4Z2 1342 aaPredicted RBP18.84■□□□□ 0.61
SNU13-201ENST00000215956 NCKAP5LQ9HCH0 1330 aa18.84■□□□□ 0.61
SNU13-201ENST00000215956 ATP7AQ04656 1500 aa18.83■□□□□ 0.61
SNU13-201ENST00000215956 CEP170BQ9Y4F5 1589 aaPredicted RBP18.83■□□□□ 0.61
SNU13-201ENST00000215956 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.61
SNU13-201ENST00000215956 SPAG9O60271 1321 aaKnown RBP18.83■□□□□ 0.6
SNU13-201ENST00000215956 INO80Q9ULG1 1556 aaPredicted RBP18.83■□□□□ 0.6
SNU13-201ENST00000215956 ZNF777Q9ULD5 760 aaPredicted RBP18.82■□□□□ 0.6
SNU13-201ENST00000215956 FYCO1Q9BQS8 1478 aa18.82■□□□□ 0.6
SNU13-201ENST00000215956 GPATCH8Q9UKJ3 1502 aaKnown RBP18.81■□□□□ 0.6
SNU13-201ENST00000215956 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
SNU13-201ENST00000215956 UBAP1LF5GYI3 381 aa18.8■□□□□ 0.6
SNU13-201ENST00000215956 A2MP01023 1474 aa18.79■□□□□ 0.6
SNU13-201ENST00000215956 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
SNU13-201ENST00000215956 PKD2Q13563 968 aa18.79■□□□□ 0.6
SNU13-201ENST00000215956 HNRNPMP52272 730 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNU13-201ENST00000215956 PLEKHH2Q8IVE3 1493 aa18.77■□□□□ 0.6
SNU13-201ENST00000215956 KIAA1107Q9UPP5 1409 aa18.77■□□□□ 0.6
SNU13-201ENST00000215956 ADGBQ8N7X0 1667 aa18.76■□□□□ 0.59
SNU13-201ENST00000215956 GGT6Q6P531 493 aa18.73■□□□□ 0.59
SNU13-201ENST00000215956 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
SNU13-201ENST00000215956 POLR1AO95602 1720 aaPredicted RBP18.73■□□□□ 0.59
SNU13-201ENST00000215956 DNMT1P26358 1616 aaKnown RBP18.72■□□□□ 0.59
SNU13-201ENST00000215956 CFDP1Q9UEE9 299 aaPredicted RBP18.71■□□□□ 0.59
SNU13-201ENST00000215956 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.58
SNU13-201ENST00000215956 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
SNU13-201ENST00000215956 MED1Q15648 1581 aaPredicted RBP18.67■□□□□ 0.58
SNU13-201ENST00000215956 NEURL4Q96JN8 1562 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms