RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 KIF14Q15058 1648 aa32.37■■■□□ 2.77
PTBP3-201ENST00000210227 UBTFP17480 764 aaKnown RBP32.36■■■□□ 2.77
PTBP3-201ENST00000210227 FER1L4A9Z1Z3 1794 aa32.36■■■□□ 2.77
PTBP3-201ENST00000210227 SCAPERQ9BY12 1400 aa32.34■■■□□ 2.77
PTBP3-201ENST00000210227 LRRIQ1Q96JM4 1722 aa32.34■■■□□ 2.77
PTBP3-201ENST00000210227 ATP1B4Q9UN42 357 aaPredicted RBP32.3■■■□□ 2.76
PTBP3-201ENST00000210227 FBXO41Q8TF61 875 aa32.24■■■□□ 2.75
PTBP3-201ENST00000210227 TROQ12816 1431 aaPredicted RBP32.24■■■□□ 2.75
PTBP3-201ENST00000210227 CDK11AQ9UQ88 783 aaPredicted RBP32.23■■■□□ 2.75
PTBP3-201ENST00000210227 ATP10AO60312 1499 aa32.22■■■□□ 2.75
PTBP3-201ENST00000210227 ARHGAP5Q13017 1502 aa32.21■■■□□ 2.75
PTBP3-201ENST00000210227 C9orf84Q5VXU9 1444 aa32.21■■■□□ 2.75
PTBP3-201ENST00000210227 EFCAB2Q5VUJ9 269 aa32.21■■■□□ 2.75
PTBP3-201ENST00000210227 ARHGEF12Q9NZN5 1544 aa32.21■■■□□ 2.75
PTBP3-201ENST00000210227 CHIC1Q5VXU3 224 aa32.2■■■□□ 2.75
PTBP3-201ENST00000210227 ZNF518AQ6AHZ1 1483 aa32.2■■■□□ 2.75
PTBP3-201ENST00000210227 KDM5CP41229 1560 aa32.19■■■□□ 2.74
PTBP3-201ENST00000210227 CLIP1P30622 1438 aa32.19■■■□□ 2.74
PTBP3-201ENST00000210227 PLPPR3Q6T4P5 718 aa32.19■■■□□ 2.74
PTBP3-201ENST00000210227 MLECQ14165 292 aa32.18■■■□□ 2.74
PTBP3-201ENST00000210227 CDC42BPBQ9Y5S2 1711 aa32.17■■■□□ 2.74
PTBP3-201ENST00000210227 HSPA2P54652 639 aa32.14■■■□□ 2.74
PTBP3-201ENST00000210227 PREX2Q70Z35 1606 aa32.14■■■□□ 2.74
PTBP3-201ENST00000210227 PREX1Q8TCU6 1659 aa32.12■■■□□ 2.73
PTBP3-201ENST00000210227 DIP2CQ9Y2E4 1556 aa32.11■■■□□ 2.73
PTBP3-201ENST00000210227 CCDC18Q5T9S5 1454 aa32.08■■■□□ 2.73
PTBP3-201ENST00000210227 ABCA6Q8N139 1617 aa32.07■■■□□ 2.72
PTBP3-201ENST00000210227 REREQ9P2R6 1566 aa32.06■■■□□ 2.72
PTBP3-201ENST00000210227 ABCC1P33527 1531 aa32.05■■■□□ 2.72
PTBP3-201ENST00000210227 ITSN2Q9NZM3 1697 aa32.05■■■□□ 2.72
PTBP3-201ENST00000210227 CASKIN1Q8WXD9 1431 aa32.05■■■□□ 2.72
PTBP3-201ENST00000210227 AFAP1Q8N556 730 aa32.03■■■□□ 2.72
PTBP3-201ENST00000210227 CDC42BPAQ5VT25 1732 aa32.03■■■□□ 2.72
PTBP3-201ENST00000210227 MLH3Q9UHC1 1453 aa31.99■■■□□ 2.71
PTBP3-201ENST00000210227 FYCO1Q9BQS8 1478 aa31.97■■■□□ 2.71
PTBP3-201ENST00000210227 TRAPPC8Q9Y2L5 1435 aa31.94■■■□□ 2.7
PTBP3-201ENST00000210227 MYT1LQ9UL68 1186 aa31.94■■■□□ 2.7
PTBP3-201ENST00000210227 C3P01024 1663 aa31.93■■■□□ 2.7
PTBP3-201ENST00000210227 KIDINS220Q9ULH0 1771 aa31.93■■■□□ 2.7
PTBP3-201ENST00000210227 CEBPAP49715 358 aaPredicted RBP31.92■■■□□ 2.7
PTBP3-201ENST00000210227 AGLP35573 1532 aa31.91■■■□□ 2.7
PTBP3-201ENST00000210227 SETD1BQ9UPS6 1966 aaKnown RBP31.9■■■□□ 2.7
PTBP3-201ENST00000210227 STRCQ7RTU9 1775 aa31.9■■■□□ 2.7
PTBP3-201ENST00000210227 UHRF1BP1Q6BDS2 1440 aa31.88■■■□□ 2.69
PTBP3-201ENST00000210227 SAMD9LQ8IVG5 1584 aa31.85■■■□□ 2.69
PTBP3-201ENST00000210227 SYCP2Q9BX26 1530 aa31.81■■■□□ 2.68
PTBP3-201ENST00000210227 CERKQ8TCT0 537 aa31.81■■■□□ 2.68
PTBP3-201ENST00000210227 GPATCH8Q9UKJ3 1502 aaKnown RBP31.75■■■□□ 2.67
PTBP3-201ENST00000210227 MROH2AA6NES4 1674 aa31.74■■■□□ 2.67
PTBP3-201ENST00000210227 CNTLNQ9NXG0 1405 aa31.73■■■□□ 2.67
PTBP3-201ENST00000210227 SUPT6HQ7KZ85 1726 aaKnown RBP31.72■■■□□ 2.67
PTBP3-201ENST00000210227 ESF1Q9H501 851 aaKnown RBP31.72■■■□□ 2.67
PTBP3-201ENST00000210227 INO80Q9ULG1 1556 aaPredicted RBP31.72■■■□□ 2.67
PTBP3-201ENST00000210227 ZNF777Q9ULD5 760 aaPredicted RBP31.71■■■□□ 2.67
PTBP3-201ENST00000210227 ATP7AQ04656 1500 aa31.7■■■□□ 2.67
PTBP3-201ENST00000210227 DMRT2Q9Y5R5 561 aa31.69■■■□□ 2.66
PTBP3-201ENST00000210227 PLXNC1O60486 1568 aa31.67■■■□□ 2.66
PTBP3-201ENST00000210227 PLEKHH2Q8IVE3 1493 aa31.66■■■□□ 2.66
PTBP3-201ENST00000210227 SPAG9O60271 1321 aaKnown RBP31.65■■■□□ 2.66
PTBP3-201ENST00000210227 KIAA1107Q9UPP5 1409 aa31.64■■■□□ 2.66
PTBP3-201ENST00000210227 PTPRTO14522 1441 aa31.63■■■□□ 2.65
PTBP3-201ENST00000210227 CLTCQ00610 1675 aaKnown RBP31.62■■■□□ 2.65
PTBP3-201ENST00000210227 CCNB3Q8WWL7 1395 aa31.61■■■□□ 2.65
PTBP3-201ENST00000210227 HNRNPMP52272 730 aaKnown RBP eCLIP31.61■■■□□ 2.658e-6■□□□□ 8.6
PTBP3-201ENST00000210227 NPATQ14207 1427 aa31.6■■■□□ 2.65
PTBP3-201ENST00000210227 TIAM1Q13009 1591 aa31.6■■■□□ 2.65
PTBP3-201ENST00000210227 MTUS2Q5JR59 1369 aa31.59■■■□□ 2.65
PTBP3-201ENST00000210227 NCOA1Q15788 1441 aa31.58■■■□□ 2.65
PTBP3-201ENST00000210227 ADGBQ8N7X0 1667 aa31.58■■■□□ 2.65
PTBP3-201ENST00000210227 CFDP1Q9UEE9 299 aaPredicted RBP31.58■■■□□ 2.65
PTBP3-201ENST00000210227 A2MP01023 1474 aa31.57■■■□□ 2.64
PTBP3-201ENST00000210227 EHBP1L1Q8N3D4 1523 aa31.56■■■□□ 2.64
PTBP3-201ENST00000210227 ZNF142P52746 1687 aaPredicted RBP31.55■■■□□ 2.64
PTBP3-201ENST00000210227 CAMSAP1Q5T5Y3 1602 aa31.54■■■□□ 2.64
PTBP3-201ENST00000210227 MYO3AQ8NEV4 1616 aa31.54■■■□□ 2.64
PTBP3-201ENST00000210227 ZMYM3Q14202 1370 aa31.52■■■□□ 2.64
PTBP3-201ENST00000210227 LTBP4Q8N2S1 1624 aa31.52■■■□□ 2.64
PTBP3-201ENST00000210227 CEP170BQ9Y4F5 1589 aaPredicted RBP31.44■■■□□ 2.62
PTBP3-201ENST00000210227 MBD5Q9P267 1494 aa31.44■■■□□ 2.62
PTBP3-201ENST00000210227 CEP162Q5TB80 1403 aa31.43■■■□□ 2.62
PTBP3-201ENST00000210227 PTPRKQ15262 1439 aa31.42■■■□□ 2.62
PTBP3-201ENST00000210227 ZNF644Q9H582 1327 aaPredicted RBP31.42■■■□□ 2.62
PTBP3-201ENST00000210227 IQSEC2Q5JU85 1478 aa31.41■■■□□ 2.62
PTBP3-201ENST00000210227 GGT6Q6P531 493 aa31.38■■■□□ 2.61
PTBP3-201ENST00000210227 PLA2R1Q13018 1463 aa31.38■■■□□ 2.61
PTBP3-201ENST00000210227 RTEL1-TNFRSF6BF6WH68 1400 aa31.37■■■□□ 2.61
PTBP3-201ENST00000210227 TCOF1Q13428 1488 aaKnown RBP31.33■■■□□ 2.61
PTBP3-201ENST00000210227 CAMSAP2Q08AD1 1489 aa31.32■■■□□ 2.6
PTBP3-201ENST00000210227 NCOA2Q15596 1464 aa31.32■■■□□ 2.6
PTBP3-201ENST00000210227 CCDC141Q6ZP82 1450 aa31.32■■■□□ 2.6
PTBP3-201ENST00000210227 NCKAP5LQ9HCH0 1330 aa31.31■■■□□ 2.6
PTBP3-201ENST00000210227 PPP6R1Q9UPN7 881 aa31.31■■■□□ 2.6
PTBP3-201ENST00000210227 DHX29Q7Z478 1369 aaKnown RBP31.29■■■□□ 2.6
PTBP3-201ENST00000210227 FAM135AQ9P2D6 1515 aa31.27■■■□□ 2.6
PTBP3-201ENST00000210227 DISP3Q9P2K9 1392 aa31.27■■■□□ 2.6
PTBP3-201ENST00000210227 DNMT1P26358 1616 aaKnown RBP31.27■■■□□ 2.6
PTBP3-201ENST00000210227 A2ML1A8K2U0 1454 aa31.27■■■□□ 2.6
PTBP3-201ENST00000210227 SPATA31D1Q6ZQQ2 1576 aa31.26■■■□□ 2.6
PTBP3-201ENST00000210227 KDM5DQ9BY66 1539 aa31.26■■■□□ 2.59
PTBP3-201ENST00000210227 POLR1AO95602 1720 aaPredicted RBP31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms