RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
NME1-201ENST00000013034 ARHGEF12Q9NZN5 1544 aa18.65■□□□□ 0.58
NME1-201ENST00000013034 HSPA2P54652 639 aa18.64■□□□□ 0.57
NME1-201ENST00000013034 MYO5CQ9NQX4 1742 aa18.63■□□□□ 0.57
NME1-201ENST00000013034 ATP10AO60312 1499 aa18.63■□□□□ 0.57
NME1-201ENST00000013034 KIF14Q15058 1648 aa18.62■□□□□ 0.57
NME1-201ENST00000013034 ZNF518AQ6AHZ1 1483 aa18.61■□□□□ 0.57
NME1-201ENST00000013034 MLECQ14165 292 aa18.6■□□□□ 0.57
NME1-201ENST00000013034 KDM5CP41229 1560 aa18.59■□□□□ 0.57
NME1-201ENST00000013034 EFCAB2Q5VUJ9 269 aa18.59■□□□□ 0.57
NME1-201ENST00000013034 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
NME1-201ENST00000013034 PREX1Q8TCU6 1659 aa18.59■□□□□ 0.57
NME1-201ENST00000013034 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
NME1-201ENST00000013034 ARHGAP35Q9NRY4 1499 aa18.58■□□□□ 0.56
NME1-201ENST00000013034 TROQ12816 1431 aaPredicted RBP18.57■□□□□ 0.56
NME1-201ENST00000013034 CLIP1P30622 1438 aa18.57■□□□□ 0.56
NME1-201ENST00000013034 ARHGAP5Q13017 1502 aa18.56■□□□□ 0.56
NME1-201ENST00000013034 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
NME1-201ENST00000013034 CERKQ8TCT0 537 aa18.54■□□□□ 0.56
NME1-201ENST00000013034 DIP2CQ9Y2E4 1556 aa18.53■□□□□ 0.56
NME1-201ENST00000013034 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.56
NME1-201ENST00000013034 UHRF1BP1Q6BDS2 1440 aa18.51■□□□□ 0.55
NME1-201ENST00000013034 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
NME1-201ENST00000013034 MLH3Q9UHC1 1453 aa18.49■□□□□ 0.55
NME1-201ENST00000013034 ABCA6Q8N139 1617 aa18.49■□□□□ 0.55
NME1-201ENST00000013034 PREX2Q70Z35 1606 aa18.48■□□□□ 0.55
NME1-201ENST00000013034 ABCC1P33527 1531 aa18.48■□□□□ 0.55
NME1-201ENST00000013034 AGLP35573 1532 aa18.47■□□□□ 0.55
NME1-201ENST00000013034 AFAP1Q8N556 730 aa18.46■□□□□ 0.55
NME1-201ENST00000013034 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.54
NME1-201ENST00000013034 CEBPAP49715 358 aaPredicted RBP18.45■□□□□ 0.54
NME1-201ENST00000013034 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
NME1-201ENST00000013034 LRRIQ1Q96JM4 1722 aa18.45■□□□□ 0.54
NME1-201ENST00000013034 CDC42BPBQ9Y5S2 1711 aa18.44■□□□□ 0.54
NME1-201ENST00000013034 STRCQ7RTU9 1775 aa18.43■□□□□ 0.54
NME1-201ENST00000013034 ITSN2Q9NZM3 1697 aa18.43■□□□□ 0.54
NME1-201ENST00000013034 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
NME1-201ENST00000013034 MYT1LQ9UL68 1186 aa18.42■□□□□ 0.54
NME1-201ENST00000013034 C3P01024 1663 aa18.41■□□□□ 0.54
NME1-201ENST00000013034 PTPRTO14522 1441 aa18.4■□□□□ 0.54
NME1-201ENST00000013034 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
NME1-201ENST00000013034 TRAPPC8Q9Y2L5 1435 aa18.4■□□□□ 0.54
NME1-201ENST00000013034 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
NME1-201ENST00000013034 SETD1BQ9UPS6 1966 aaKnown RBP18.37■□□□□ 0.53
NME1-201ENST00000013034 ESF1Q9H501 851 aaKnown RBP18.37■□□□□ 0.53
NME1-201ENST00000013034 FYCO1Q9BQS8 1478 aa18.36■□□□□ 0.53
NME1-201ENST00000013034 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
NME1-201ENST00000013034 CDC42BPAQ5VT25 1732 aa18.34■□□□□ 0.53
NME1-201ENST00000013034 SAMD9LQ8IVG5 1584 aa18.34■□□□□ 0.53
NME1-201ENST00000013034 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
NME1-201ENST00000013034 NCOA1Q15788 1441 aa18.33■□□□□ 0.53
NME1-201ENST00000013034 MROH2AA6NES4 1674 aa18.33■□□□□ 0.52
NME1-201ENST00000013034 NPATQ14207 1427 aa18.32■□□□□ 0.52
NME1-201ENST00000013034 SYCP2Q9BX26 1530 aa18.31■□□□□ 0.52
NME1-201ENST00000013034 LTBP4Q8N2S1 1624 aa18.31■□□□□ 0.52
NME1-201ENST00000013034 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
NME1-201ENST00000013034 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
NME1-201ENST00000013034 PLXNC1O60486 1568 aa18.27■□□□□ 0.52
NME1-201ENST00000013034 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.52
NME1-201ENST00000013034 ATP7AQ04656 1500 aa18.27■□□□□ 0.51
NME1-201ENST00000013034 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
NME1-201ENST00000013034 INO80Q9ULG1 1556 aaPredicted RBP18.26■□□□□ 0.51
NME1-201ENST00000013034 GPATCH8Q9UKJ3 1502 aaKnown RBP18.26■□□□□ 0.51
NME1-201ENST00000013034 CAMSAP1Q5T5Y3 1602 aa18.26■□□□□ 0.51
NME1-201ENST00000013034 KIAA1107Q9UPP5 1409 aa18.25■□□□□ 0.51
NME1-201ENST00000013034 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
NME1-201ENST00000013034 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
NME1-201ENST00000013034 MYO3AQ8NEV4 1616 aa18.23■□□□□ 0.51
NME1-201ENST00000013034 PLA2R1Q13018 1463 aa18.22■□□□□ 0.51
NME1-201ENST00000013034 ZMYM3Q14202 1370 aa18.22■□□□□ 0.51
NME1-201ENST00000013034 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
NME1-201ENST00000013034 A2MP01023 1474 aa18.21■□□□□ 0.51
NME1-201ENST00000013034 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
NME1-201ENST00000013034 CLTCQ00610 1675 aaKnown RBP18.19■□□□□ 0.5
NME1-201ENST00000013034 ILDR2Q71H61 639 aa18.19■□□□□ 0.5
NME1-201ENST00000013034 CEP170BQ9Y4F5 1589 aaPredicted RBP18.19■□□□□ 0.5
NME1-201ENST00000013034 CCNB3Q8WWL7 1395 aa18.18■□□□□ 0.5
NME1-201ENST00000013034 SOCS7O14512 581 aa18.18■□□□□ 0.5
NME1-201ENST00000013034 PTPRKQ15262 1439 aa18.17■□□□□ 0.5
NME1-201ENST00000013034 HNRNPMP52272 730 aaKnown RBP eCLIP18.17■□□□□ 0.5
NME1-201ENST00000013034 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
NME1-201ENST00000013034 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
NME1-201ENST00000013034 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
NME1-201ENST00000013034 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
NME1-201ENST00000013034 PKD2Q13563 968 aa18.14■□□□□ 0.49
NME1-201ENST00000013034 TIAM1Q13009 1591 aa18.13■□□□□ 0.49
NME1-201ENST00000013034 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
NME1-201ENST00000013034 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
NME1-201ENST00000013034 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
NME1-201ENST00000013034 NCKAP5LQ9HCH0 1330 aa18.12■□□□□ 0.49
NME1-201ENST00000013034 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
NME1-201ENST00000013034 A2ML1A8K2U0 1454 aa18.1■□□□□ 0.49
NME1-201ENST00000013034 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
NME1-201ENST00000013034 GGT6Q6P531 493 aa18.1■□□□□ 0.49
NME1-201ENST00000013034 MBD5Q9P267 1494 aa18.09■□□□□ 0.49
NME1-201ENST00000013034 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
NME1-201ENST00000013034 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
NME1-201ENST00000013034 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
NME1-201ENST00000013034 KDM5DQ9BY66 1539 aa18.06■□□□□ 0.48
NME1-201ENST00000013034 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms