RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
NME1-201ENST00000013034 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
NME1-201ENST00000013034 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
NME1-201ENST00000013034 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
NME1-201ENST00000013034 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
NME1-201ENST00000013034 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
NME1-201ENST00000013034 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
NME1-201ENST00000013034 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
NME1-201ENST00000013034 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
NME1-201ENST00000013034 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
NME1-201ENST00000013034 TNP1P09430 55 aa4.48□□□□□ -1.69
NME1-201ENST00000013034 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
NME1-201ENST00000013034 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
NME1-201ENST00000013034 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
NME1-201ENST00000013034 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.71
NME1-201ENST00000013034 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
NME1-201ENST00000013034 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
NME1-201ENST00000013034 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
NME1-201ENST00000013034 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
NME1-201ENST00000013034 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
NME1-201ENST00000013034 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
NME1-201ENST00000013034 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
NME1-201ENST00000013034 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
NME1-201ENST00000013034 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
NME1-201ENST00000013034 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
NME1-201ENST00000013034 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
NME1-201ENST00000013034 MT1EP04732 61 aa4.18□□□□□ -1.74
NME1-201ENST00000013034 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
NME1-201ENST00000013034 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
NME1-201ENST00000013034 MT4P47944 62 aa4.12□□□□□ -1.75
NME1-201ENST00000013034 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
NME1-201ENST00000013034 MT1GP13640 62 aa4.07□□□□□ -1.76
NME1-201ENST00000013034 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
NME1-201ENST00000013034 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
NME1-201ENST00000013034 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
NME1-201ENST00000013034 MT1MQ8N339 61 aa4□□□□□ -1.77
NME1-201ENST00000013034 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
NME1-201ENST00000013034 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
NME1-201ENST00000013034 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
NME1-201ENST00000013034 MT1LQ93083 61 aa3.94□□□□□ -1.78
NME1-201ENST00000013034 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
NME1-201ENST00000013034 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
NME1-201ENST00000013034 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
NME1-201ENST00000013034 INE1O15225 51 aa3.84□□□□□ -1.79
NME1-201ENST00000013034 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
NME1-201ENST00000013034 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
NME1-201ENST00000013034 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
NME1-201ENST00000013034 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
NME1-201ENST00000013034 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
NME1-201ENST00000013034 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
NME1-201ENST00000013034 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
NME1-201ENST00000013034 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
NME1-201ENST00000013034 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
NME1-201ENST00000013034 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
NME1-201ENST00000013034 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
NME1-201ENST00000013034 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
NME1-201ENST00000013034 MT1AP04731 61 aa3.36□□□□□ -1.87
NME1-201ENST00000013034 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
NME1-201ENST00000013034 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
NME1-201ENST00000013034 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
NME1-201ENST00000013034 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
NME1-201ENST00000013034 MT3P25713 68 aa3.09□□□□□ -1.91
NME1-201ENST00000013034 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
NME1-201ENST00000013034 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
NME1-201ENST00000013034 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
NME1-201ENST00000013034 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
NME1-201ENST00000013034 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
NME1-201ENST00000013034 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
NME1-201ENST00000013034 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
NME1-201ENST00000013034 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
NME1-201ENST00000013034 PRM1P04553 51 aa2.48□□□□□ -2.01
NME1-201ENST00000013034 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
NME1-201ENST00000013034 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
NME1-201ENST00000013034 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
NME1-201ENST00000013034 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
NME1-201ENST00000013034 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
NME1-201ENST00000013034 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms