RNA–Protein interactions for RNA: ENSMUST00000200038.1

Chfr-212, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

TSL 1 (best) BASIC

Gene Chfr, Length 606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-212ENSMUST00000200038 CntlnA2AM05 1397 aa20.72■□□□□ 0.91
Chfr-212ENSMUST00000200038 Mug1P28665 1476 aa20.7■□□□□ 0.9
Chfr-212ENSMUST00000200038 Lmod2Q3UHZ5 550 aa20.69■□□□□ 0.9
Chfr-212ENSMUST00000200038 Prex2Q3LAC4 1598 aa20.68■□□□□ 0.9
Chfr-212ENSMUST00000200038 Rnf17Q99MV7 1640 aa20.68■□□□□ 0.9
Chfr-212ENSMUST00000200038 Lemd3Q9WU40 921 aa20.68■□□□□ 0.9
Chfr-212ENSMUST00000200038 Synj2Q9D2G5 1434 aa20.66■□□□□ 0.9
Chfr-212ENSMUST00000200038 Cyb5rlB1AS42 316 aa20.65■□□□□ 0.9
Chfr-212ENSMUST00000200038 Naip2Q9QUK4 1447 aa20.63■□□□□ 0.89
Chfr-212ENSMUST00000200038 Erich3F6QRE9 1637 aa20.62■□□□□ 0.89
Chfr-212ENSMUST00000200038 Pcf11G3X9Z4 1553 aa20.62■□□□□ 0.89
Chfr-212ENSMUST00000200038 Lmo7E9PYF4 1699 aaKnown RBP20.61■□□□□ 0.89
Chfr-212ENSMUST00000200038 Ncapd3Q6ZQK0 1506 aa20.6■□□□□ 0.89
Chfr-212ENSMUST00000200038 Safb2Q80YR5 991 aaKnown RBP20.56■□□□□ 0.88
Chfr-212ENSMUST00000200038 Arhgap5P97393 1501 aa20.55■□□□□ 0.88
Chfr-212ENSMUST00000200038 Kiaa1551Q5DTW7 1521 aa20.55■□□□□ 0.88
Chfr-212ENSMUST00000200038 Kdm6bQ5NCY0 1641 aa20.54■□□□□ 0.88
Chfr-212ENSMUST00000200038 OvosQ3UU35 1456 aa20.53■□□□□ 0.88
Chfr-212ENSMUST00000200038 Fam208aQ69ZR9 1610 aaKnown RBP20.52■□□□□ 0.88
Chfr-212ENSMUST00000200038 Abca9Q8K449 1623 aa20.49■□□□□ 0.87
Chfr-212ENSMUST00000200038 MyclP10166 368 aa20.49■□□□□ 0.87
Chfr-212ENSMUST00000200038 Hecw2Q6I6G8 1578 aa20.49■□□□□ 0.87
Chfr-212ENSMUST00000200038 Gm1043A0A140LJC2 1431 aa20.48■□□□□ 0.87
Chfr-212ENSMUST00000200038 Tdrd9Q14BI7 1383 aa20.46■□□□□ 0.87
Chfr-212ENSMUST00000200038 Cdk11bP24788 784 aaKnown RBP20.45■□□□□ 0.86
Chfr-212ENSMUST00000200038 NpatQ8BMA5 1420 aa20.44■□□□□ 0.86
Chfr-212ENSMUST00000200038 Naip1Q9QWK5 1403 aa20.44■□□□□ 0.86
Chfr-212ENSMUST00000200038 Atp10aO54827 1508 aa20.42■□□□□ 0.86
Chfr-212ENSMUST00000200038 Kiaa0556Q8C753 1610 aa20.42■□□□□ 0.86
Chfr-212ENSMUST00000200038 Sart1Q9Z315 806 aaKnown RBP20.41■□□□□ 0.86
Chfr-212ENSMUST00000200038 Ptch1Q61115 1434 aa20.41■□□□□ 0.86
Chfr-212ENSMUST00000200038 NexmifQ5DTT1 1515 aa20.41■□□□□ 0.86
Chfr-212ENSMUST00000200038 Trappc8E9PWG2 1437 aa20.4■□□□□ 0.86
Chfr-212ENSMUST00000200038 Cdc42bpaQ3UU96 1719 aa20.39■□□□□ 0.86
Chfr-212ENSMUST00000200038 Yeats2Q3TUF7 1407 aa20.39■□□□□ 0.85
Chfr-212ENSMUST00000200038 Caskin1Q6P9K8 1431 aa20.36■□□□□ 0.85
Chfr-212ENSMUST00000200038 Ccnb3Q810T2 1396 aa20.35■□□□□ 0.85
Chfr-212ENSMUST00000200038 Camsap2Q8C1B1 1461 aa20.35■□□□□ 0.85
Chfr-212ENSMUST00000200038 Kif14L0N7N1 1674 aaKnown RBP20.35■□□□□ 0.85
Chfr-212ENSMUST00000200038 Cfap74Q3UY96 1578 aa20.33■□□□□ 0.84
Chfr-212ENSMUST00000200038 Peg3Q3URU2 1571 aa20.32■□□□□ 0.84
Chfr-212ENSMUST00000200038 Brwd3A2AHJ4 1799 aa20.31■□□□□ 0.84
Chfr-212ENSMUST00000200038 PtprmP28828 1452 aa20.29■□□□□ 0.84
Chfr-212ENSMUST00000200038 Tiam1Q60610 1591 aa20.29■□□□□ 0.84
Chfr-212ENSMUST00000200038 Abcc3B2RX12 1523 aa20.28■□□□□ 0.84
Chfr-212ENSMUST00000200038 Dip2cE9PWR4 1557 aa20.28■□□□□ 0.84
Chfr-212ENSMUST00000200038 Kdm5cP41230 1554 aa20.28■□□□□ 0.84
Chfr-212ENSMUST00000200038 Kidins220E9Q9B7 1793 aa20.26■□□□□ 0.83
Chfr-212ENSMUST00000200038 Qser1A2BIE1 1698 aa20.26■□□□□ 0.83
Chfr-212ENSMUST00000200038 Zmym4A2A791 1549 aaKnown RBP20.25■□□□□ 0.83
Chfr-212ENSMUST00000200038 Ercc6l2Q9JIM3 1537 aa20.24■□□□□ 0.83
Chfr-212ENSMUST00000200038 Neurl4Q5NCX5 1563 aa20.23■□□□□ 0.83
Chfr-212ENSMUST00000200038 RereQ80TZ9 1558 aa20.23■□□□□ 0.83
Chfr-212ENSMUST00000200038 Afap1Q80YS6 731 aa20.22■□□□□ 0.83
Chfr-212ENSMUST00000200038 Lmtk2Q3TYD6 1471 aa20.22■□□□□ 0.83
Chfr-212ENSMUST00000200038 Dennd4bQ3U1Y4 1499 aa20.22■□□□□ 0.83
Chfr-212ENSMUST00000200038 Adcy10Q8C0T9 1614 aa20.2■□□□□ 0.82
Chfr-212ENSMUST00000200038 Adamtsl3G3UXC7 1706 aa20.2■□□□□ 0.82
Chfr-212ENSMUST00000200038 Rrp7aQ9D1C9 280 aaKnown RBP20.2■□□□□ 0.82
Chfr-212ENSMUST00000200038 Gm32742A0A1B0GT42 1604 aa20.2■□□□□ 0.82
Chfr-212ENSMUST00000200038 Map3k5O35099 1380 aa20.2■□□□□ 0.82
Chfr-212ENSMUST00000200038 Arhgef40Q3UPH7 1517 aa20.18■□□□□ 0.82
Chfr-212ENSMUST00000200038 Prdm16A2A935 1275 aa20.18■□□□□ 0.82
Chfr-212ENSMUST00000200038 Rsph4aQ8BYM7 716 aa20.18■□□□□ 0.82
Chfr-212ENSMUST00000200038 Mtus2Q3UHD3 1353 aa20.11■□□□□ 0.81
Chfr-212ENSMUST00000200038 Ahdc1Q6PAL7 1594 aaKnown RBP20.11■□□□□ 0.81
Chfr-212ENSMUST00000200038 Kif3bQ61771 747 aa20.09■□□□□ 0.81
Chfr-212ENSMUST00000200038 Pdcd11Q6NS46 1862 aaKnown RBP20.09■□□□□ 0.81
Chfr-212ENSMUST00000200038 Nos1Q9Z0J4 1429 aa20.09■□□□□ 0.81
Chfr-212ENSMUST00000200038 Talpid3E9PV87 1520 aa20.08■□□□□ 0.81
Chfr-212ENSMUST00000200038 Gm13697A2AK42 830 aa20.07■□□□□ 0.8
Chfr-212ENSMUST00000200038 Hecw1Q8K4P8 1604 aa20.05■□□□□ 0.8
Chfr-212ENSMUST00000200038 Myom2Q14BI5 1463 aa20.05■□□□□ 0.8
Chfr-212ENSMUST00000200038 Naip6Q9JIB6 1403 aa20.04■□□□□ 0.8
Chfr-212ENSMUST00000200038 Cdc42bpgQ80UW5 1551 aa20.03■□□□□ 0.8
Chfr-212ENSMUST00000200038 Cfap65Q3V0B4 1847 aa20.02■□□□□ 0.8
Chfr-212ENSMUST00000200038 Gli2Q0VGT2 1544 aa20.02■□□□□ 0.79
Chfr-212ENSMUST00000200038 Abcc5Q9R1X5 1436 aa20.01■□□□□ 0.79
Chfr-212ENSMUST00000200038 Plekhh2Q8C115 1491 aa20■□□□□ 0.79
Chfr-212ENSMUST00000200038 Znf518aB2RRF6 1478 aaKnown RBP19.99■□□□□ 0.79
Chfr-212ENSMUST00000200038 Cdc42bpbQ7TT50 1713 aa19.99■□□□□ 0.79
Chfr-212ENSMUST00000200038 Cabp1Q9JLK7 227 aa19.99■□□□□ 0.79
Chfr-212ENSMUST00000200038 Fhod3Q76LL6 1578 aa19.99■□□□□ 0.79
Chfr-212ENSMUST00000200038 Zbtb7cQ8VCZ7 619 aa19.98■□□□□ 0.79
Chfr-212ENSMUST00000200038 Supt6hQ62383 1726 aaKnown RBP19.98■□□□□ 0.79
Chfr-212ENSMUST00000200038 Spag9Q58A65 1321 aaKnown RBP19.98■□□□□ 0.79
Chfr-212ENSMUST00000200038 SphkapQ6NSW3 1687 aa19.97■□□□□ 0.79
Chfr-212ENSMUST00000200038 Trpm2Q91YD4 1506 aa19.97■□□□□ 0.79
Chfr-212ENSMUST00000200038 Abca6Q8K441 1624 aa19.96■□□□□ 0.79
Chfr-212ENSMUST00000200038 Chic2Q9D9G3 165 aa19.96■□□□□ 0.79
Chfr-212ENSMUST00000200038 4930407I10RikD3Z5T8 1512 aa19.95■□□□□ 0.78
Chfr-212ENSMUST00000200038 Pip4k2bQ80XI4 416 aa19.94■□□□□ 0.78
Chfr-212ENSMUST00000200038 Cul9Q80TT8 1865 aa19.94■□□□□ 0.78
Chfr-212ENSMUST00000200038 GphnQ8BUV3 769 aaKnown RBP19.93■□□□□ 0.78
Chfr-212ENSMUST00000200038 Il16O54824 1322 aa19.93■□□□□ 0.78
Chfr-212ENSMUST00000200038 Fbxo41Q6NS60 873 aa19.92■□□□□ 0.78
Chfr-212ENSMUST00000200038 Hnrnpul2Q00PI9 745 aaKnown RBP19.91■□□□□ 0.78
Chfr-212ENSMUST00000200038 NclP09405 707 aaKnown RBP19.9■□□□□ 0.78
Chfr-212ENSMUST00000200038 Fmn2Q9JL04 1578 aa19.9■□□□□ 0.78
Chfr-212ENSMUST00000200038 Trpm1Q2TV84 1622 aa19.89■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 91.1 ms