RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Eif4g3Q80XI3 1579 aaKnown RBP39.75■■■■□ 3.95
Ldb1-208ENSMUST00000185355 Ccdc141E9Q8Q6 1531 aa39.73■■■■□ 3.95
Ldb1-208ENSMUST00000185355 Naip5Q9R016 1403 aa39.72■■■■□ 3.95
Ldb1-208ENSMUST00000185355 Dnmt1P13864 1620 aaKnown RBP39.72■■■■□ 3.95
Ldb1-208ENSMUST00000185355 Kdm6bQ5NCY0 1641 aa39.72■■■■□ 3.95
Ldb1-208ENSMUST00000185355 Magi1Q6RHR9 1471 aa39.7■■■■□ 3.95
Ldb1-208ENSMUST00000185355 Cabp1Q9JLK7 227 aa39.68■■■■□ 3.94
Ldb1-208ENSMUST00000185355 Mroh2aD3Z750 1679 aa39.67■■■■□ 3.94
Ldb1-208ENSMUST00000185355 Mapkbp1Q6NS57 1503 aa39.66■■■■□ 3.94
Ldb1-208ENSMUST00000185355 Gm13697A2AK42 830 aa39.66■■■■□ 3.94
Ldb1-208ENSMUST00000185355 Zcchc11B2RX14 1644 aaKnown RBP39.66■■■■□ 3.94
Ldb1-208ENSMUST00000185355 Mtus2Q3UHD3 1353 aa39.64■■■■□ 3.94
Ldb1-208ENSMUST00000185355 Mphosph9A6H5Y1 991 aa39.63■■■■□ 3.93
Ldb1-208ENSMUST00000185355 Il16O54824 1322 aa39.62■■■■□ 3.93
Ldb1-208ENSMUST00000185355 Fam163aQ8CAA5 168 aa39.62■■■■□ 3.93
Ldb1-208ENSMUST00000185355 Kdm3bQ6ZPY7 1562 aa39.61■■■■□ 3.93
Ldb1-208ENSMUST00000185355 SphkapQ6NSW3 1687 aa39.59■■■■□ 3.93
Ldb1-208ENSMUST00000185355 Lamc1P02468 1607 aaKnown RBP39.57■■■■□ 3.92
Ldb1-208ENSMUST00000185355 Rrbp1Q99PL5 1605 aaKnown RBP39.57■■■■□ 3.92
Ldb1-208ENSMUST00000185355 Prex2Q3LAC4 1598 aa39.53■■■■□ 3.92
Ldb1-208ENSMUST00000185355 Kif21bQ9QXL1 1668 aa39.51■■■■□ 3.92
Ldb1-208ENSMUST00000185355 Mlh3A0A1Y7VMP7 1443 aa39.49■■■■□ 3.91
Ldb1-208ENSMUST00000185355 Neo1P97798 1493 aa39.48■■■■□ 3.91
Ldb1-208ENSMUST00000185355 Arhgef12Q8R4H2 1543 aaKnown RBP39.47■■■■□ 3.91
Ldb1-208ENSMUST00000185355 Caskin1Q6P9K8 1431 aa39.44■■■■□ 3.9
Ldb1-208ENSMUST00000185355 Rprd2Q6NXI6 1469 aaKnown RBP39.41■■■■□ 3.9
Ldb1-208ENSMUST00000185355 Adgrb2Q8CGM1 1561 aa39.4■■■■□ 3.9
Ldb1-208ENSMUST00000185355 AlkP97793 1621 aa39.39■■■■□ 3.9
Ldb1-208ENSMUST00000185355 Jph4Q80WT0 628 aa39.38■■■■□ 3.89
Ldb1-208ENSMUST00000185355 Fgd6Q69ZL1 1399 aa39.35■■■■□ 3.89
Ldb1-208ENSMUST00000185355 Zfp644E9QA22 1323 aa39.33■■■■□ 3.89
Ldb1-208ENSMUST00000185355 Fancd2Q80V62 1450 aa39.32■■■■□ 3.89
Ldb1-208ENSMUST00000185355 Pkd2O35245 966 aa39.31■■■■□ 3.88
Ldb1-208ENSMUST00000185355 Usp47Q8BY87 1376 aa39.3■■■■□ 3.88
Ldb1-208ENSMUST00000185355 Fam208aQ69ZR9 1610 aaKnown RBP39.29■■■■□ 3.88
Ldb1-208ENSMUST00000185355 Pprc1Q6NZN1 1644 aa39.29■■■■□ 3.88
Ldb1-208ENSMUST00000185355 Pik3c2gO70167 1506 aa39.28■■■■□ 3.88
Ldb1-208ENSMUST00000185355 AknaQ80VW7 1404 aa39.25■■■■□ 3.87
Ldb1-208ENSMUST00000185355 Tdrd9Q14BI7 1383 aa39.24■■■■□ 3.87
Ldb1-208ENSMUST00000185355 Fmn2Q9JL04 1578 aa39.2■■■■□ 3.87
Ldb1-208ENSMUST00000185355 Trpm2Q91YD4 1506 aa39.17■■■■□ 3.86
Ldb1-208ENSMUST00000185355 Mapk8ip2Q9ERE9 830 aa39.15■■■■□ 3.86
Ldb1-208ENSMUST00000185355 Supt6hQ62383 1726 aaKnown RBP39.13■■■■□ 3.85
Ldb1-208ENSMUST00000185355 Gm14025A2AP89 1413 aa39.1■■■■□ 3.85
Ldb1-208ENSMUST00000185355 Rnf17Q99MV7 1640 aa39.09■■■■□ 3.85
Ldb1-208ENSMUST00000185355 Kiaa1210E9Q0C6 1637 aa39.07■■■■□ 3.85
Ldb1-208ENSMUST00000185355 Adgrl2Q8JZZ7 1487 aa39.05■■■■□ 3.84
Ldb1-208ENSMUST00000185355 Sin3aQ60520 1274 aaKnown RBP39.04■■■■□ 3.84
Ldb1-208ENSMUST00000185355 Fkbp15Q6P9Q6 1216 aaKnown RBP39.03■■■■□ 3.84
Ldb1-208ENSMUST00000185355 DroshaQ5HZJ0 1373 aaKnown RBP39.03■■■■□ 3.84
Ldb1-208ENSMUST00000185355 Gm32742A0A1B0GT42 1604 aa39.02■■■■□ 3.84
Ldb1-208ENSMUST00000185355 Stra8P70278 393 aa39.02■■■■□ 3.84
Ldb1-208ENSMUST00000185355 Wdr7Q920I9 1489 aa39.01■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Ttll5Q8CHB8 1328 aa38.99■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Csrnp3P59055 597 aa38.98■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Nup155Q99P88 1391 aaKnown RBP38.98■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Pdcd11Q6NS46 1862 aaKnown RBP38.98■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Mast1Q9R1L5 1570 aa38.97■■■■□ 3.83
Ldb1-208ENSMUST00000185355 NhsB1AV60 1647 aa38.97■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Arhgap5P97393 1501 aa38.97■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Kif14L0N7N1 1674 aaKnown RBP38.97■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Chd1P40201 1711 aa38.96■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Ncoa1P70365 1447 aa38.96■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Neurl4Q5NCX5 1563 aa38.95■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Cfap74Q3UY96 1578 aa38.95■■■■□ 3.83
Ldb1-208ENSMUST00000185355 Smg6P61406 1418 aaKnown RBP38.94■■■■□ 3.82
Ldb1-208ENSMUST00000185355 Dhx9O70133 1380 aaKnown RBP38.92■■■■□ 3.82
Ldb1-208ENSMUST00000185355 Abcc1O35379 1528 aa38.92■■■■□ 3.82
Ldb1-208ENSMUST00000185355 Mbd5B1AYB6 1498 aa38.91■■■■□ 3.82
Ldb1-208ENSMUST00000185355 Lrrc9Q8CDN9 1456 aa38.91■■■■□ 3.82
Ldb1-208ENSMUST00000185355 Hecw1Q8K4P8 1604 aa38.87■■■■□ 3.81
Ldb1-208ENSMUST00000185355 Trak1Q6PD31 939 aa38.85■■■■□ 3.81
Ldb1-208ENSMUST00000185355 Tnnt3Q9QZ47 272 aa38.83■■■■□ 3.81
Ldb1-208ENSMUST00000185355 Map4P27546 1125 aaKnown RBP38.79■■■■□ 3.8
Ldb1-208ENSMUST00000185355 Abca8bQ8K440 1620 aa38.78■■■■□ 3.8
Ldb1-208ENSMUST00000185355 PtprgQ05909 1442 aa38.77■■■■□ 3.8
Ldb1-208ENSMUST00000185355 Trappc8E9PWG2 1437 aa38.76■■■■□ 3.8
Ldb1-208ENSMUST00000185355 Ssh2Q5SW75 1423 aa38.76■■■■□ 3.8
Ldb1-208ENSMUST00000185355 Clstn2Q9ER65 966 aa38.74■■■■□ 3.79
Ldb1-208ENSMUST00000185355 Abcc3B2RX12 1523 aa38.72■■■■□ 3.79
Ldb1-208ENSMUST00000185355 Mug2P28666 1451 aa38.7■■■■□ 3.79
Ldb1-208ENSMUST00000185355 Rgl3Q3UYI5 709 aa38.7■■■■□ 3.79
Ldb1-208ENSMUST00000185355 Dapk1Q80YE7 1442 aa38.68■■■■□ 3.78
Ldb1-208ENSMUST00000185355 Dot1lQ6XZL8 1540 aa38.66■■■■□ 3.78
Ldb1-208ENSMUST00000185355 Cwc22Q8C5N3 908 aaKnown RBP38.66■■■■□ 3.78
Ldb1-208ENSMUST00000185355 Aplp2Q06335 707 aa38.64■■■■□ 3.78
Ldb1-208ENSMUST00000185355 Sart1Q9Z315 806 aaKnown RBP38.64■■■■□ 3.78
Ldb1-208ENSMUST00000185355 Asxl1P59598 1514 aa38.64■■■■□ 3.78
Ldb1-208ENSMUST00000185355 Rrp7aQ9D1C9 280 aaKnown RBP38.64■■■■□ 3.78
Ldb1-208ENSMUST00000185355 Znf710Q3U288 666 aa38.63■■■■□ 3.77
Ldb1-208ENSMUST00000185355 Atp10dQ8K2X1 1416 aa38.63■■■■□ 3.77
Ldb1-208ENSMUST00000185355 Cdc42bpbQ7TT50 1713 aa38.62■■■■□ 3.77
Ldb1-208ENSMUST00000185355 Rock1P70335 1354 aa38.61■■■■□ 3.77
Ldb1-208ENSMUST00000185355 Myom3A2ABU4 1439 aa38.61■■■■□ 3.77
Ldb1-208ENSMUST00000185355 1700123L14RikQ3V2K7 440 aa38.59■■■■□ 3.77
Ldb1-208ENSMUST00000185355 Cpsf1Q9EPU4 1441 aaKnown RBP38.59■■■■□ 3.77
Ldb1-208ENSMUST00000185355 Iqgap1Q9JKF1 1657 aaKnown RBP38.58■■■■□ 3.77
Ldb1-208ENSMUST00000185355 Naip6Q9JIB6 1403 aa38.58■■■■□ 3.77
Ldb1-208ENSMUST00000185355 Igf1rQ60751 1373 aa38.52■■■■□ 3.76
Ldb1-208ENSMUST00000185355 Prdm16A2A935 1275 aa38.52■■■■□ 3.76
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms