RNA–Protein interactions for RNA: ENSMUST00000115658.5

Pcdha11-201, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-201ENSMUST00000115658 Clstn2Q9ER65 966 aa17.6■□□□□ 0.41
Pcdha11-201ENSMUST00000115658 Mak16Q8BGS0 296 aaKnown RBP17.59■□□□□ 0.41
Pcdha11-201ENSMUST00000115658 Chmp4bQ9D8B3 224 aaKnown RBP17.58■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 Tpm2P58774 284 aa17.58■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 Trim30aP15533 496 aa17.57■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 Mfap1aC0HKD8 439 aaKnown RBP17.57■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 Mfap1bC0HKD9 439 aaKnown RBP17.57■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 Baz1bQ9Z277 1479 aa17.56■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 RdxP26043 583 aaKnown RBP17.55■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 Zscan21Q07231 555 aa17.55■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 NudcO35685 332 aaKnown RBP17.55■□□□□ 0.4
Pcdha11-201ENSMUST00000115658 Pcmtd1P59913 357 aa17.52■□□□□ 0.39
Pcdha11-201ENSMUST00000115658 Iqcf3Q9D498 203 aa17.51■□□□□ 0.39
Pcdha11-201ENSMUST00000115658 Ccdc88bQ4QRL3 1481 aa17.51■□□□□ 0.39
Pcdha11-201ENSMUST00000115658 Speer4f1Q9D5Q6 258 aa17.49■□□□□ 0.39
Pcdha11-201ENSMUST00000115658 Gpatch11Q3UFS4 262 aa17.49■□□□□ 0.39
Pcdha11-201ENSMUST00000115658 Rsph3aQ3UFY4 516 aa17.48■□□□□ 0.39
Pcdha11-201ENSMUST00000115658 Cep162Q6ZQ06 1403 aa17.48■□□□□ 0.39
Pcdha11-201ENSMUST00000115658 MccE9PWI3 1003 aa17.48■□□□□ 0.39
Pcdha11-201ENSMUST00000115658 Fam43aQ8BUP8 424 aa17.45■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Eif2s2Q99L45 331 aaKnown RBP17.45■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Phf14Q9D4H9 881 aa17.45■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Rundc1Q0VDN7 615 aa17.43■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Washc2Q6PGL7 1334 aa17.43■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Ylpm1Q9R0I7 1386 aaKnown RBP17.43■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Hsp90b1P08113 802 aaKnown RBP17.42■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Cald1E9QA15 768 aaKnown RBP17.42■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 SetQ9EQU5 289 aaKnown RBP17.42■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 NacadQ5SWP3 1504 aa17.4■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Ak7Q9D2H2 614 aa17.4■□□□□ 0.38
Pcdha11-201ENSMUST00000115658 Rbm10Q99KG3 930 aaKnown RBP17.39■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 DmtnQ9WV69 405 aa17.39■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Cluap1Q8R3P7 413 aa17.38■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Arhgap35Q91YM2 1499 aa17.38■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Cspp1B2RX88 1205 aa17.38■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 HnrnpuQ8VEK3 800 aaKnown RBP17.38■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Ccdc18Q640L5 1455 aa17.37■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Fkbp15Q6P9Q6 1216 aaKnown RBP17.37■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Fyco1Q8VDC1 1437 aa17.36■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Pkd2O35245 966 aa17.36■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Prkrip1Q9CWV6 186 aaKnown RBP17.35■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 CrbnQ8C7D2 445 aa17.34■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Podxl2Q8CAE9 603 aa17.34■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Fam13bQ8K2H3 851 aa17.34■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 TimelessQ9R1X4 1197 aa17.34■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Kdm2aP59997 1161 aa17.34■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 Znf692Q3U381 531 aa17.34■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 GorabQ8BRM2 368 aa17.33■□□□□ 0.37
Pcdha11-201ENSMUST00000115658 PnnO35691 725 aaKnown RBP17.33■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Taf3Q5HZG4 932 aa17.32■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Rabep1O35551 862 aa17.32■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Kif20aP97329 887 aa17.32■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Stard8Q8K031 1019 aa17.31■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Ttll13A4Q9F6 804 aa17.3■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Paxip1Q6NZQ4 1056 aa17.3■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Gtf3c5Q8R2T8 520 aa17.3■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Mtus2Q3UHD3 1353 aa17.3■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Mroh3A0A1D5RM54 893 aa17.3■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Tmf1B9EKI3 1091 aa17.29■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Glipr1l2Q9CQ35 332 aa17.29■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Kif3aP28741 701 aa17.28■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Mphosph9A6H5Y1 991 aa17.27■□□□□ 0.36
Pcdha11-201ENSMUST00000115658 Casq1O09165 405 aa17.27■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Golga2Q921M4 999 aa17.26■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Srpk2O54781 681 aaKnown RBP17.26■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Smarce1O54941 411 aaKnown RBP17.26■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Gm20521D3Z5F7 333 aa17.25■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Rfx1P48377 963 aa17.25■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 CgnP59242 1191 aa17.25■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Ubl4bQ9CQ84 188 aa17.25■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Mrvi1Q9WUX5 899 aaKnown RBP17.24■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Atp6v1dP57746 247 aa17.23■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Kif16bB1AVY7 1312 aa17.22■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 IqubQ8CDK3 788 aa17.22■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Ccdc183A2AJB1 534 aa17.22■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Pes1Q9EQ61 584 aaKnown RBP17.22■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Kif4P33174 1231 aa17.21■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Isy1Q69ZQ2 285 aaKnown RBP17.21■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Gripap1Q8VD04 806 aa17.21■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Ccdc173A0JLY1 547 aa17.21■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Tomm22Q9CPQ3 142 aa17.21■□□□□ 0.35
Pcdha11-201ENSMUST00000115658 Ralbp1Q62172 648 aa17.2■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Pnmal2G3X9N3 661 aa17.2■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Sf3a1Q8K4Z5 791 aaKnown RBP17.2■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Rock2P70336 1388 aa17.19■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Dusp27Q148W8 1138 aa17.18■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Exosc9Q9JHI7 438 aaKnown RBP17.17■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Znf771Q8BJ90 317 aa17.17■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Tpd52l1O54818 204 aa17.17■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Znf330Q922H9 316 aa17.17■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 AampJ3QN89 436 aa17.16■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 R3hcc1Q8BSI6 488 aa17.16■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Pdia4P08003 638 aaKnown RBP17.16■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Utp3Q9JI13 469 aaKnown RBP17.16■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Anp32eP97822 260 aaKnown RBP17.15■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Ccar1Q8CH18 1146 aaKnown RBP17.15■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Fmn1Q05860 1466 aa17.15■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 Fez1Q8K0X8 392 aa17.15■□□□□ 0.34
Pcdha11-201ENSMUST00000115658 EzrP26040 586 aaKnown RBP17.14■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 St18Q80TY4 1045 aa17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms