RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Adgrb2Q8CGM1 1561 aa11.85□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Pdcd11Q6NS46 1862 aaKnown RBP11.84□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Bcl11aQ9QYE3 773 aa11.84□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Gm13697A2AK42 830 aa11.83□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Myt1Q8CFC2 1127 aa11.82□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Dot1lQ6XZL8 1540 aa11.82□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Gapvd1Q6PAR5 1458 aa11.81□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Plb1Q3TTY0 1478 aa11.81□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Pik3c2gO70167 1506 aa11.8□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 PxdnQ3UQ28 1475 aa11.8□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Rad54l2Q99NG0 1466 aa11.8□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Mug2P28666 1451 aa11.79□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Naip6Q9JIB6 1403 aa11.78□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Rapgef6Q5NCJ1 1609 aa11.78□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Cdk13Q69ZA1 1511 aaKnown RBP11.78□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Myt1lP97500 1187 aa11.77□□□□□ -0.52
Pcdh9-201ENSMUST00000068992 Slc4a2P13808 1237 aaKnown RBP11.77□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Sin3aQ60520 1274 aaKnown RBP11.76□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Ncoa3O09000 1398 aa11.76□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Fam208aQ69ZR9 1610 aaKnown RBP11.75□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Erbb3Q61526 1339 aa11.75□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Kdm5cP41230 1554 aa11.75□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Mia2Q91ZV0 1396 aa11.75□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Abcc5Q9R1X5 1436 aa11.74□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Dhx57Q6P5D3 1388 aaKnown RBP11.74□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 CadpsQ80TJ1 1355 aa11.74□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 LrpprcQ6PB66 1392 aaKnown RBP11.73□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Pak3Q61036 559 aa11.73□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Cux2P70298 1426 aa11.73□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Pbrm1Q8BSQ9 1634 aaKnown RBP11.72□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Abca17E9PX95 1733 aa11.72□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Ercc6F8VPZ5 1481 aa11.72□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Grin2aP35436 1464 aa11.72□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Sipa1l1Q8C0T5 1782 aa11.72□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Clasp1Q80TV8 1535 aaKnown RBP11.71□□□□□ -0.53
Pcdh9-201ENSMUST00000068992 Soga1E1U8D0 1418 aa11.71□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Mink1Q9JM52 1308 aa11.71□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Adamts13Q769J6 1426 aa11.71□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Gm32742A0A1B0GT42 1604 aa11.7□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Ccnb3Q810T2 1396 aa11.7□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Myom1Q62234 1667 aaKnown RBP11.7□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Plch2A2AP18 1501 aa11.69□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Robo2Q7TPD3 1470 aa11.69□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Cfap74Q3UY96 1578 aa11.68□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Eif4g3Q80XI3 1579 aaKnown RBP11.68□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Supt16hQ920B9 1047 aa11.68□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Gm14025A2AP89 1413 aa11.67□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Cdc42bpbQ7TT50 1713 aa11.67□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Wdr7Q920I9 1489 aa11.66□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 PrkcshO08795 521 aa11.66□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Aebp1Q640N1 1128 aa11.66□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Mapkbp1Q6NS57 1503 aa11.66□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Dnmt1P13864 1620 aaKnown RBP11.66□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Ift140E9PY46 1464 aa11.65□□□□□ -0.54
Pcdh9-201ENSMUST00000068992 Hecw1Q8K4P8 1604 aa11.64□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Tmem131lQ3U3D7 1597 aa11.64□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Zfp644E9QA22 1323 aa11.64□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Phldb1Q6PDH0 1371 aaKnown RBP11.64□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Trpm1Q2TV84 1622 aa11.63□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 PnisrA2AJT4 805 aaKnown RBP11.63□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 RalgapbQ8BQZ4 1484 aa11.62□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Fmn2Q9JL04 1578 aa11.62□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Mast1Q9R1L5 1570 aa11.62□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Nup160Q9Z0W3 1402 aaKnown RBP11.62□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Rrbp1Q99PL5 1605 aaKnown RBP11.61□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Abca8aQ8K442 1620 aa11.6□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Prex2Q3LAC4 1598 aa11.6□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Arhgap27A2AB59 869 aa11.6□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 L3mbtl2P59178 703 aa11.6□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Ift172Q6VH22 1749 aa11.6□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Xrn1P97789 1719 aaKnown RBP11.59□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Kcnh8P59111 1102 aa11.59□□□□□ -0.55
Pcdh9-201ENSMUST00000068992 Shroom2A2ALU4 1481 aa11.58□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Cdk5rap2Q8K389 1822 aa11.58□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Tnnt3Q9QZ47 272 aa11.57□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Usp47Q8BY87 1376 aa11.56□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Cpsf1Q9EPU4 1441 aaKnown RBP11.56□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 TnikP83510 1323 aa11.56□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Npm2Q80W85 207 aa11.56□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Ccdc141E9Q8Q6 1531 aa11.56□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Pola1P33609 1465 aa11.55□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Neurl4Q5NCX5 1563 aa11.55□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Fndc1E9Q043 1732 aa11.54□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 ShprhQ7TPQ3 1674 aa11.54□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Rnf17Q99MV7 1640 aa11.54□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Kank1E9Q238 1360 aa11.53□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Myo5cE9Q1F5 1742 aa11.53□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 PtprgQ05909 1442 aa11.53□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Plekhg5Q66T02 1073 aa11.53□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Dhx9O70133 1380 aaKnown RBP11.53□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Abcc1O35379 1528 aa11.52□□□□□ -0.56
Pcdh9-201ENSMUST00000068992 Mphosph9A6H5Y1 991 aa11.52□□□□□ -0.57
Pcdh9-201ENSMUST00000068992 Calr4Q3TQS0 420 aa11.52□□□□□ -0.57
Pcdh9-201ENSMUST00000068992 Abca9Q8K449 1623 aa11.51□□□□□ -0.57
Pcdh9-201ENSMUST00000068992 Cep170Q6A065 1588 aa11.51□□□□□ -0.57
Pcdh9-201ENSMUST00000068992 Kidins220E9Q9B7 1793 aa11.51□□□□□ -0.57
Pcdh9-201ENSMUST00000068992 Itsn2Q9Z0R6 1659 aa11.5□□□□□ -0.57
Pcdh9-201ENSMUST00000068992 Ino80Q6ZPV2 1559 aa11.5□□□□□ -0.57
Pcdh9-201ENSMUST00000068992 Zmym4A2A791 1549 aaKnown RBP11.49□□□□□ -0.57
Pcdh9-201ENSMUST00000068992 Arhgap31A6X8Z5 1425 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms