RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Soga1E1U8D0 1418 aa20.71■□□□□ 0.91
Nup54-201ENSMUST00000038514 Disp1Q3TDN0 1521 aa20.7■□□□□ 0.9
Nup54-201ENSMUST00000038514 Abcc5Q9R1X5 1436 aa20.69■□□□□ 0.9
Nup54-201ENSMUST00000038514 Gm13695A2AK44 830 aa20.67■□□□□ 0.9
Nup54-201ENSMUST00000038514 Pik3c2gO70167 1506 aa20.67■□□□□ 0.9
Nup54-201ENSMUST00000038514 Plekhh2Q8C115 1491 aa20.67■□□□□ 0.9
Nup54-201ENSMUST00000038514 Cabp1Q9JLK7 227 aa20.67■□□□□ 0.9
Nup54-201ENSMUST00000038514 SphkapQ6NSW3 1687 aa20.67■□□□□ 0.9
Nup54-201ENSMUST00000038514 Kdm6bQ5NCY0 1641 aa20.66■□□□□ 0.9
Nup54-201ENSMUST00000038514 Pkd2O35245 966 aa20.66■□□□□ 0.9
Nup54-201ENSMUST00000038514 Mrs2Q5NCE8 434 aa20.66■□□□□ 0.9
Nup54-201ENSMUST00000038514 Arhgef40Q3UPH7 1517 aa20.65■□□□□ 0.9
Nup54-201ENSMUST00000038514 Slc4a2P13808 1237 aaKnown RBP20.64■□□□□ 0.89
Nup54-201ENSMUST00000038514 Zfp644E9QA22 1323 aa20.64■□□□□ 0.89
Nup54-201ENSMUST00000038514 Rtl5Q5DTT4 599 aa20.63■□□□□ 0.89
Nup54-201ENSMUST00000038514 Abca16E9PWJ7 1678 aa20.63■□□□□ 0.89
Nup54-201ENSMUST00000038514 Supt16hQ920B9 1047 aa20.63■□□□□ 0.89
Nup54-201ENSMUST00000038514 PxdnQ3UQ28 1475 aa20.62■□□□□ 0.89
Nup54-201ENSMUST00000038514 Rapgef6Q5NCJ1 1609 aa20.61■□□□□ 0.89
Nup54-201ENSMUST00000038514 Setd1bQ8CFT2 1985 aa20.61■□□□□ 0.89
Nup54-201ENSMUST00000038514 Plb1Q3TTY0 1478 aa20.61■□□□□ 0.89
Nup54-201ENSMUST00000038514 Ncoa3O09000 1398 aa20.6■□□□□ 0.89
Nup54-201ENSMUST00000038514 Cdc42bpaQ3UU96 1719 aa20.6■□□□□ 0.89
Nup54-201ENSMUST00000038514 Kdm3bQ6ZPY7 1562 aa20.6■□□□□ 0.89
Nup54-201ENSMUST00000038514 Mbd5B1AYB6 1498 aa20.58■□□□□ 0.89
Nup54-201ENSMUST00000038514 Adcy10Q8C0T9 1614 aa20.58■□□□□ 0.89
Nup54-201ENSMUST00000038514 Wdr43Q6ZQL4 677 aaKnown RBP20.58■□□□□ 0.88
Nup54-201ENSMUST00000038514 AlkP97793 1621 aa20.57■□□□□ 0.88
Nup54-201ENSMUST00000038514 Exoc6Q8R313 802 aa20.57■□□□□ 0.88
Nup54-201ENSMUST00000038514 Eif5bQ05D44 1216 aaKnown RBP20.57■□□□□ 0.88
Nup54-201ENSMUST00000038514 Kif14L0N7N1 1674 aaKnown RBP20.56■□□□□ 0.88
Nup54-201ENSMUST00000038514 Wwc2Q6NXJ0 1187 aa20.56■□□□□ 0.88
Nup54-201ENSMUST00000038514 Arhgef11Q68FM7 1552 aa20.55■□□□□ 0.88
Nup54-201ENSMUST00000038514 Ppp4r2Q0VGB7 417 aa20.55■□□□□ 0.88
Nup54-201ENSMUST00000038514 Arhgef12Q8R4H2 1543 aaKnown RBP20.55■□□□□ 0.88
Nup54-201ENSMUST00000038514 PnisrA2AJT4 805 aaKnown RBP20.53■□□□□ 0.88
Nup54-201ENSMUST00000038514 Adgrb2Q8CGM1 1561 aa20.53■□□□□ 0.88
Nup54-201ENSMUST00000038514 Mrc2Q64449 1479 aa20.52■□□□□ 0.88
Nup54-201ENSMUST00000038514 WrnO09053 1401 aa20.52■□□□□ 0.88
Nup54-201ENSMUST00000038514 Mtus2Q3UHD3 1353 aa20.52■□□□□ 0.88
Nup54-201ENSMUST00000038514 Il16O54824 1322 aa20.52■□□□□ 0.88
Nup54-201ENSMUST00000038514 Map3k4O08648 1597 aa20.51■□□□□ 0.87
Nup54-201ENSMUST00000038514 NrdcQ8BHG1 1161 aa20.51■□□□□ 0.87
Nup54-201ENSMUST00000038514 Kiaa1551Q5DTW7 1521 aa20.5■□□□□ 0.87
Nup54-201ENSMUST00000038514 Supt6hQ62383 1726 aaKnown RBP20.5■□□□□ 0.87
Nup54-201ENSMUST00000038514 Plekhg5Q66T02 1073 aa20.48■□□□□ 0.87
Nup54-201ENSMUST00000038514 Bcl11aQ9QYE3 773 aa20.48■□□□□ 0.87
Nup54-201ENSMUST00000038514 Pbrm1Q8BSQ9 1634 aaKnown RBP20.47■□□□□ 0.87
Nup54-201ENSMUST00000038514 Naip6Q9JIB6 1403 aa20.46■□□□□ 0.87
Nup54-201ENSMUST00000038514 Mug2P28666 1451 aa20.46■□□□□ 0.87
Nup54-201ENSMUST00000038514 Pelp1Q9DBD5 1123 aaKnown RBP20.45■□□□□ 0.86
Nup54-201ENSMUST00000038514 Dapk1Q80YE7 1442 aa20.45■□□□□ 0.86
Nup54-201ENSMUST00000038514 Dhx9O70133 1380 aaKnown RBP20.44■□□□□ 0.86
Nup54-201ENSMUST00000038514 Myom3A2ABU4 1439 aa20.43■□□□□ 0.86
Nup54-201ENSMUST00000038514 Cwc22Q8C5N3 908 aaKnown RBP20.43■□□□□ 0.86
Nup54-201ENSMUST00000038514 P3h3Q8CG70 732 aa20.43■□□□□ 0.86
Nup54-201ENSMUST00000038514 Abcc2Q8VI47 1543 aa20.41■□□□□ 0.86
Nup54-201ENSMUST00000038514 DiexfQ8BTT6 772 aaKnown RBP20.41■□□□□ 0.86
Nup54-201ENSMUST00000038514 Nup160Q9Z0W3 1402 aaKnown RBP20.41■□□□□ 0.86
Nup54-201ENSMUST00000038514 Trpm2Q91YD4 1506 aa20.4■□□□□ 0.86
Nup54-201ENSMUST00000038514 Dhx57Q6P5D3 1388 aaKnown RBP20.39■□□□□ 0.86
Nup54-201ENSMUST00000038514 Liat1Q810M6 228 aa20.39■□□□□ 0.86
Nup54-201ENSMUST00000038514 Shroom2A2ALU4 1481 aa20.39■□□□□ 0.85
Nup54-201ENSMUST00000038514 Cc2d2bA0A286YDU8 1405 aa20.37■□□□□ 0.85
Nup54-201ENSMUST00000038514 Ttll5Q8CHB8 1328 aa20.36■□□□□ 0.85
Nup54-201ENSMUST00000038514 Wdr7Q920I9 1489 aa20.36■□□□□ 0.85
Nup54-201ENSMUST00000038514 Rgl3Q3UYI5 709 aa20.36■□□□□ 0.85
Nup54-201ENSMUST00000038514 Cdk13Q69ZA1 1511 aaKnown RBP20.35■□□□□ 0.85
Nup54-201ENSMUST00000038514 DroshaQ5HZJ0 1373 aaKnown RBP20.35■□□□□ 0.85
Nup54-201ENSMUST00000038514 Rundc1Q0VDN7 615 aa20.34■□□□□ 0.85
Nup54-201ENSMUST00000038514 Mapkbp1Q6NS57 1503 aa20.34■□□□□ 0.85
Nup54-201ENSMUST00000038514 Mroh2aD3Z750 1679 aa20.33■□□□□ 0.85
Nup54-201ENSMUST00000038514 RalgapbQ8BQZ4 1484 aa20.33■□□□□ 0.84
Nup54-201ENSMUST00000038514 Pak3Q61036 559 aa20.32■□□□□ 0.84
Nup54-201ENSMUST00000038514 Ccdc141E9Q8Q6 1531 aa20.31■□□□□ 0.84
Nup54-201ENSMUST00000038514 Ofd1Q80Z25 1017 aa20.31■□□□□ 0.84
Nup54-201ENSMUST00000038514 Arhgap31A6X8Z5 1425 aa20.3■□□□□ 0.84
Nup54-201ENSMUST00000038514 Magi1Q6RHR9 1471 aa20.3■□□□□ 0.84
Nup54-201ENSMUST00000038514 Egfem1Q8C088 590 aa20.3■□□□□ 0.84
Nup54-201ENSMUST00000038514 Iqgap1Q9JKF1 1657 aaKnown RBP20.3■□□□□ 0.84
Nup54-201ENSMUST00000038514 Prex2Q3LAC4 1598 aa20.3■□□□□ 0.84
Nup54-201ENSMUST00000038514 Card11Q8CIS0 1159 aa20.29■□□□□ 0.84
Nup54-201ENSMUST00000038514 Arhgap27A2AB59 869 aa20.28■□□□□ 0.84
Nup54-201ENSMUST00000038514 L3mbtl2P59178 703 aa20.28■□□□□ 0.84
Nup54-201ENSMUST00000038514 Trak1Q6PD31 939 aa20.28■□□□□ 0.84
Nup54-201ENSMUST00000038514 Cpsf1Q9EPU4 1441 aaKnown RBP20.27■□□□□ 0.83
Nup54-201ENSMUST00000038514 Zcchc11B2RX14 1644 aaKnown RBP20.26■□□□□ 0.83
Nup54-201ENSMUST00000038514 Mlh3A0A1Y7VMP7 1443 aa20.26■□□□□ 0.83
Nup54-201ENSMUST00000038514 Nup155Q99P88 1391 aaKnown RBP20.25■□□□□ 0.83
Nup54-201ENSMUST00000038514 Fmn2Q9JL04 1578 aa20.25■□□□□ 0.83
Nup54-201ENSMUST00000038514 Rock2P70336 1388 aa20.24■□□□□ 0.83
Nup54-201ENSMUST00000038514 Dot1lQ6XZL8 1540 aa20.24■□□□□ 0.83
Nup54-201ENSMUST00000038514 Tubgcp6G5E8P0 1769 aa20.24■□□□□ 0.83
Nup54-201ENSMUST00000038514 Caskin1Q6P9K8 1431 aa20.23■□□□□ 0.83
Nup54-201ENSMUST00000038514 Fam163aQ8CAA5 168 aa20.22■□□□□ 0.83
Nup54-201ENSMUST00000038514 Ifnlr1Q8CGK5 535 aa20.21■□□□□ 0.83
Nup54-201ENSMUST00000038514 Tdrd9Q14BI7 1383 aa20.2■□□□□ 0.82
Nup54-201ENSMUST00000038514 Asxl1P59598 1514 aa20.2■□□□□ 0.82
Nup54-201ENSMUST00000038514 Polr3aB2RXC6 1390 aa20.19■□□□□ 0.82
Nup54-201ENSMUST00000038514 Setd1aE9PYH6 1716 aa20.18■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms