RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 SphkapQ6NSW3 1687 aa18.04■□□□□ 0.48
Rnf4-201ENSMUST00000030992 Lamc1P02468 1607 aaKnown RBP18.03■□□□□ 0.48
Rnf4-201ENSMUST00000030992 Arhgap27A2AB59 869 aa18.03■□□□□ 0.48
Rnf4-201ENSMUST00000030992 Kdm3bQ6ZPY7 1562 aa18.02■□□□□ 0.48
Rnf4-201ENSMUST00000030992 1700123L14RikQ3V2K7 440 aa18.02■□□□□ 0.48
Rnf4-201ENSMUST00000030992 Kif21bQ9QXL1 1668 aa18.01■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Pprc1Q6NZN1 1644 aa18.01■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Map3k4O08648 1597 aa18■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Il16O54824 1322 aa18■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Zcchc11B2RX14 1644 aaKnown RBP18■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Ube2uB1AUC4 352 aa18■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Arhgap31A6X8Z5 1425 aa17.99■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Mapkbp1Q6NS57 1503 aa17.99■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Rprd2Q6NXI6 1469 aaKnown RBP17.99■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Mroh2aD3Z750 1679 aa17.99■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Mapk8ip2Q9ERE9 830 aa17.98■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Rusc2Q80U22 1514 aa17.97■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Magi1Q6RHR9 1471 aa17.97■□□□□ 0.47
Rnf4-201ENSMUST00000030992 Dhx57Q6P5D3 1388 aaKnown RBP17.96■□□□□ 0.47
Rnf4-201ENSMUST00000030992 AlkP97793 1621 aa17.95■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Mtus2Q3UHD3 1353 aa17.95■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Dnmt1P13864 1620 aaKnown RBP17.95■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Zfp644E9QA22 1323 aa17.94■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Aplp2Q06335 707 aa17.94■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Fam163aQ8CAA5 168 aa17.94■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Adgrb2Q8CGM1 1561 aa17.94■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Ccdc141E9Q8Q6 1531 aa17.94■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Pik3c2gO70167 1506 aa17.92■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Usp47Q8BY87 1376 aa17.92■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Prex2Q3LAC4 1598 aa17.91■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Pkd2O35245 966 aa17.9■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Sin3aQ60520 1274 aaKnown RBP17.9■□□□□ 0.46
Rnf4-201ENSMUST00000030992 Mlh3A0A1Y7VMP7 1443 aa17.89■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Smg6P61406 1418 aaKnown RBP17.87■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Arhgef12Q8R4H2 1543 aaKnown RBP17.86■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Caskin1Q6P9K8 1431 aa17.86■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Trpm2Q91YD4 1506 aa17.86■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Znf710Q3U288 666 aa17.85■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Eif4g3Q80XI3 1579 aaKnown RBP17.85■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Rrbp1Q99PL5 1605 aaKnown RBP17.85■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Ncoa1P70365 1447 aa17.85■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Tnnt3Q9QZ47 272 aa17.85■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Supt6hQ62383 1726 aaKnown RBP17.83■□□□□ 0.45
Rnf4-201ENSMUST00000030992 Stra8P70278 393 aa17.82■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Neo1P97798 1493 aa17.82■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Fam208aQ69ZR9 1610 aaKnown RBP17.82■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Hnrnpul2Q00PI9 745 aaKnown RBP17.81■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Kif14L0N7N1 1674 aaKnown RBP17.8■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Mbd5B1AYB6 1498 aa17.8■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Tdrd9Q14BI7 1383 aa17.79■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Fancd2Q80V62 1450 aa17.78■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Fmn2Q9JL04 1578 aa17.78■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Jph4Q80WT0 628 aa17.77■□□□□ 0.44
Rnf4-201ENSMUST00000030992 Ttll5Q8CHB8 1328 aa17.76■□□□□ 0.43
Rnf4-201ENSMUST00000030992 Dhx9O70133 1380 aaKnown RBP17.75■□□□□ 0.43
Rnf4-201ENSMUST00000030992 DroshaQ5HZJ0 1373 aaKnown RBP17.75■□□□□ 0.43
Rnf4-201ENSMUST00000030992 Adgrl2Q8JZZ7 1487 aa17.71■□□□□ 0.43
Rnf4-201ENSMUST00000030992 Wdr7Q920I9 1489 aa17.71■□□□□ 0.43
Rnf4-201ENSMUST00000030992 Fgd6Q69ZL1 1399 aa17.71■□□□□ 0.43
Rnf4-201ENSMUST00000030992 Gm32742A0A1B0GT42 1604 aa17.7■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Rnf17Q99MV7 1640 aa17.69■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Nup155Q99P88 1391 aaKnown RBP17.69■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Mug2P28666 1451 aa17.68■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Mast1Q9R1L5 1570 aa17.68■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Lrrc9Q8CDN9 1456 aa17.67■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Neurl4Q5NCX5 1563 aa17.67■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Trak1Q6PD31 939 aa17.66■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Pdcd11Q6NS46 1862 aaKnown RBP17.66■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Kiaa1210E9Q0C6 1637 aa17.65■□□□□ 0.42
Rnf4-201ENSMUST00000030992 AknaQ80VW7 1404 aa17.65■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Dapk1Q80YE7 1442 aa17.65■□□□□ 0.42
Rnf4-201ENSMUST00000030992 Naip6Q9JIB6 1403 aa17.65■□□□□ 0.42
Rnf4-201ENSMUST00000030992 PtprgQ05909 1442 aa17.64■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Gm13695A2AK44 830 aa17.63■□□□□ 0.41
Rnf4-201ENSMUST00000030992 CenpbP27790 599 aa17.63■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Dot1lQ6XZL8 1540 aa17.63■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Asxl1P59598 1514 aa17.62■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Gm38655A0A286YDK6 273 aa17.62■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Plekhg5Q66T02 1073 aa17.62■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Ssh2Q5SW75 1423 aa17.61■□□□□ 0.41
Rnf4-201ENSMUST00000030992 NhsB1AV60 1647 aa17.61■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Gm14025A2AP89 1413 aa17.61■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Cwc22Q8C5N3 908 aaKnown RBP17.61■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Cfap74Q3UY96 1578 aa17.61■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Arhgap5P97393 1501 aa17.6■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Iqgap1Q9JKF1 1657 aaKnown RBP17.6■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Rgl3Q3UYI5 709 aa17.6■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Cpsf1Q9EPU4 1441 aaKnown RBP17.6■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Map4P27546 1125 aaKnown RBP17.59■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Fkbp15Q6P9Q6 1216 aaKnown RBP17.59■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Trappc8E9PWG2 1437 aa17.59■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Hecw1Q8K4P8 1604 aa17.59■□□□□ 0.41
Rnf4-201ENSMUST00000030992 SafbD3YXK2 937 aaKnown RBP17.58■□□□□ 0.41
Rnf4-201ENSMUST00000030992 Cdk13Q69ZA1 1511 aaKnown RBP17.58■□□□□ 0.41
Rnf4-201ENSMUST00000030992 RalgapbQ8BQZ4 1484 aa17.58■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Rock1P70335 1354 aa17.57■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Myom3A2ABU4 1439 aa17.57■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Abcc3B2RX12 1523 aa17.56■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Chd1P40201 1711 aa17.56■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Rundc1Q0VDN7 615 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms