RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 CenpbP27790 599 aa27.76■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Znf710Q3U288 666 aa27.76■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Pprc1Q6NZN1 1644 aa27.75■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Arhgef40Q3UPH7 1517 aa27.73■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Cabp1Q9JLK7 227 aa27.73■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Arhgef11Q68FM7 1552 aa27.72■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Kiaa1551Q5DTW7 1521 aa27.72■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Rprd2Q6NXI6 1469 aaKnown RBP27.72■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Hnrnpul2Q00PI9 745 aaKnown RBP27.71■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Smg6P61406 1418 aaKnown RBP27.71■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Shroom2A2ALU4 1481 aa27.7■■■□□ 2.03
Ccdc34-201ENSMUST00000028580 Lamc1P02468 1607 aaKnown RBP27.7■■■□□ 2.02
Ccdc34-201ENSMUST00000028580 Il16O54824 1322 aa27.69■■■□□ 2.02
Ccdc34-201ENSMUST00000028580 Cdc42bpaQ3UU96 1719 aa27.65■■■□□ 2.02
Ccdc34-201ENSMUST00000028580 Kdm3bQ6ZPY7 1562 aa27.65■■■□□ 2.02
Ccdc34-201ENSMUST00000028580 Arhgap27A2AB59 869 aa27.64■■■□□ 2.02
Ccdc34-201ENSMUST00000028580 Sin3aQ60520 1274 aaKnown RBP27.64■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Kdm6bQ5NCY0 1641 aa27.63■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Adcy10Q8C0T9 1614 aa27.63■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Mtus2Q3UHD3 1353 aa27.63■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Usp47Q8BY87 1376 aa27.62■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Map3k4O08648 1597 aa27.62■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Pik3c2gO70167 1506 aa27.6■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Kif21bQ9QXL1 1668 aa27.6■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Dhx57Q6P5D3 1388 aaKnown RBP27.6■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 SphkapQ6NSW3 1687 aa27.6■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Pkd2O35245 966 aa27.59■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Ncoa1P70365 1447 aa27.58■■■□□ 2.01
Ccdc34-201ENSMUST00000028580 Dnmt1P13864 1620 aaKnown RBP27.56■■■□□ 2
Ccdc34-201ENSMUST00000028580 Mapkbp1Q6NS57 1503 aa27.55■■■□□ 2
Ccdc34-201ENSMUST00000028580 Zfp644E9QA22 1323 aa27.55■■■□□ 2
Ccdc34-201ENSMUST00000028580 Arhgap31A6X8Z5 1425 aa27.54■■■□□ 2
Ccdc34-201ENSMUST00000028580 AlkP97793 1621 aa27.53■■■□□ 2
Ccdc34-201ENSMUST00000028580 Fam163aQ8CAA5 168 aa27.52■■■□□ 2
Ccdc34-201ENSMUST00000028580 Magi1Q6RHR9 1471 aa27.52■■■□□ 2
Ccdc34-201ENSMUST00000028580 Arhgef12Q8R4H2 1543 aaKnown RBP27.51■■□□□ 1.99
Ccdc34-201ENSMUST00000028580 Adgrb2Q8CGM1 1561 aa27.49■■□□□ 1.99
Ccdc34-201ENSMUST00000028580 Gm38655A0A286YDK6 273 aa27.46■■□□□ 1.99
Ccdc34-201ENSMUST00000028580 Mlh3A0A1Y7VMP7 1443 aa27.46■■□□□ 1.99
Ccdc34-201ENSMUST00000028580 Ccdc141E9Q8Q6 1531 aa27.44■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 Zcchc11B2RX14 1644 aaKnown RBP27.44■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 Mroh2aD3Z750 1679 aa27.42■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 Caskin1Q6P9K8 1431 aa27.41■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 Mbd5B1AYB6 1498 aa27.41■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 DroshaQ5HZJ0 1373 aaKnown RBP27.4■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 Fgd6Q69ZL1 1399 aa27.39■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 Rrbp1Q99PL5 1605 aaKnown RBP27.39■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 Trpm2Q91YD4 1506 aa27.39■■□□□ 1.98
Ccdc34-201ENSMUST00000028580 SafbD3YXK2 937 aaKnown RBP27.39■■□□□ 1.97
Ccdc34-201ENSMUST00000028580 Neo1P97798 1493 aa27.36■■□□□ 1.97
Ccdc34-201ENSMUST00000028580 Prex2Q3LAC4 1598 aa27.36■■□□□ 1.97
Ccdc34-201ENSMUST00000028580 Gm13695A2AK44 830 aa27.33■■□□□ 1.97
Ccdc34-201ENSMUST00000028580 Myt1Q8CFC2 1127 aa27.32■■□□□ 1.96
Ccdc34-201ENSMUST00000028580 Ttll5Q8CHB8 1328 aa27.29■■□□□ 1.96
Ccdc34-201ENSMUST00000028580 Kif14L0N7N1 1674 aaKnown RBP27.28■■□□□ 1.96
Ccdc34-201ENSMUST00000028580 Jph4Q80WT0 628 aa27.28■■□□□ 1.96
Ccdc34-201ENSMUST00000028580 Dhx9O70133 1380 aaKnown RBP27.28■■□□□ 1.96
Ccdc34-201ENSMUST00000028580 AknaQ80VW7 1404 aa27.27■■□□□ 1.96
Ccdc34-201ENSMUST00000028580 Supt6hQ62383 1726 aaKnown RBP27.27■■□□□ 1.96
Ccdc34-201ENSMUST00000028580 Tdrd9Q14BI7 1383 aa27.27■■□□□ 1.96
Ccdc34-201ENSMUST00000028580 Cwc22Q8C5N3 908 aaKnown RBP27.26■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Plekhg5Q66T02 1073 aa27.25■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Fmn2Q9JL04 1578 aa27.24■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Wdr7Q920I9 1489 aa27.23■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Mug2P28666 1451 aa27.22■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Dapk1Q80YE7 1442 aa27.22■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Naip6Q9JIB6 1403 aa27.21■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Nup155Q99P88 1391 aaKnown RBP27.21■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Fancd2Q80V62 1450 aa27.21■■□□□ 1.95
Ccdc34-201ENSMUST00000028580 Fam208aQ69ZR9 1610 aaKnown RBP27.2■■□□□ 1.94
Ccdc34-201ENSMUST00000028580 Adgrl2Q8JZZ7 1487 aa27.2■■□□□ 1.94
Ccdc34-201ENSMUST00000028580 Calr4Q3TQS0 420 aa27.19■■□□□ 1.94
Ccdc34-201ENSMUST00000028580 Trak1Q6PD31 939 aa27.17■■□□□ 1.94
Ccdc34-201ENSMUST00000028580 Mrs2Q5NCE8 434 aa27.17■■□□□ 1.94
Ccdc34-201ENSMUST00000028580 Chd1P40201 1711 aa27.15■■□□□ 1.94
Ccdc34-201ENSMUST00000028580 Gm14025A2AP89 1413 aa27.15■■□□□ 1.94
Ccdc34-201ENSMUST00000028580 Slc4a2P13808 1237 aaKnown RBP27.15■■□□□ 1.94
Ccdc34-201ENSMUST00000028580 Cpsf1Q9EPU4 1441 aaKnown RBP27.13■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Rgl3Q3UYI5 709 aa27.13■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 PnisrA2AJT4 805 aaKnown RBP27.12■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Anp32aO35381 247 aa27.12■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Lrrc9Q8CDN9 1456 aa27.11■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 PtprgQ05909 1442 aa27.11■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Abcc1O35379 1528 aa27.1■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 RalgapbQ8BQZ4 1484 aa27.1■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Neurl4Q5NCX5 1563 aa27.09■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Exoc6Q8R313 802 aa27.09■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Washc2Q6PGL7 1334 aa27.08■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Mast1Q9R1L5 1570 aa27.08■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Rundc1Q0VDN7 615 aa27.08■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Myom3A2ABU4 1439 aa27.08■■□□□ 1.93
Ccdc34-201ENSMUST00000028580 Slc24a1Q91WD8 1130 aa27.07■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Map4P27546 1125 aaKnown RBP27.07■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Rock1P70335 1354 aa27.06■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Wwc2Q6NXJ0 1187 aa27.06■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Dot1lQ6XZL8 1540 aa27.05■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Gm32742A0A1B0GT42 1604 aa27.05■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Kiaa1210E9Q0C6 1637 aa27.05■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Rock2P70336 1388 aa27.04■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Card11Q8CIS0 1159 aa27.03■■□□□ 1.92
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms