RNA–Protein interactions for RNA: ENSMUST00000025204.5

Pfdn1-201, Transcript of Prefoldin subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pfdn1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1-201ENSMUST00000025204 Prex2Q3LAC4 1598 aa20.53■□□□□ 0.88
Pfdn1-201ENSMUST00000025204 Fam208aQ69ZR9 1610 aaKnown RBP20.5■□□□□ 0.87
Pfdn1-201ENSMUST00000025204 Gm1043A0A140LJC2 1431 aa20.5■□□□□ 0.87
Pfdn1-201ENSMUST00000025204 Cdc42bpaQ3UU96 1719 aa20.48■□□□□ 0.87
Pfdn1-201ENSMUST00000025204 Naip1Q9QWK5 1403 aa20.48■□□□□ 0.87
Pfdn1-201ENSMUST00000025204 A2mQ6GQT1 1474 aa20.45■□□□□ 0.86
Pfdn1-201ENSMUST00000025204 Tiam1Q60610 1591 aa20.45■□□□□ 0.86
Pfdn1-201ENSMUST00000025204 Fndc1E9Q043 1732 aa20.44■□□□□ 0.86
Pfdn1-201ENSMUST00000025204 Mlh3A0A1Y7VMP7 1443 aa20.41■□□□□ 0.86
Pfdn1-201ENSMUST00000025204 Rnf17Q99MV7 1640 aa20.4■□□□□ 0.86
Pfdn1-201ENSMUST00000025204 NexmifQ5DTT1 1515 aa20.37■□□□□ 0.85
Pfdn1-201ENSMUST00000025204 Abca9Q8K449 1623 aa20.35■□□□□ 0.85
Pfdn1-201ENSMUST00000025204 Lmod2Q3UHZ5 550 aa20.33■□□□□ 0.85
Pfdn1-201ENSMUST00000025204 Lmtk2Q3TYD6 1471 aa20.32■□□□□ 0.84
Pfdn1-201ENSMUST00000025204 Kiaa0556Q8C753 1610 aa20.31■□□□□ 0.84
Pfdn1-201ENSMUST00000025204 Arhgap5P97393 1501 aa20.3■□□□□ 0.84
Pfdn1-201ENSMUST00000025204 Ncapd3Q6ZQK0 1506 aa20.29■□□□□ 0.84
Pfdn1-201ENSMUST00000025204 Synj2Q9D2G5 1434 aa20.27■□□□□ 0.83
Pfdn1-201ENSMUST00000025204 Pdcd11Q6NS46 1862 aaKnown RBP20.26■□□□□ 0.83
Pfdn1-201ENSMUST00000025204 Caskin1Q6P9K8 1431 aa20.26■□□□□ 0.83
Pfdn1-201ENSMUST00000025204 Cfap74Q3UY96 1578 aa20.25■□□□□ 0.83
Pfdn1-201ENSMUST00000025204 Abcc3B2RX12 1523 aa20.22■□□□□ 0.83
Pfdn1-201ENSMUST00000025204 Ccnb3Q810T2 1396 aa20.21■□□□□ 0.83
Pfdn1-201ENSMUST00000025204 Hecw2Q6I6G8 1578 aa20.21■□□□□ 0.83
Pfdn1-201ENSMUST00000025204 Alpk3Q924C5 1678 aa20.21■□□□□ 0.83
Pfdn1-201ENSMUST00000025204 Gm32742A0A1B0GT42 1604 aa20.2■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Kidins220E9Q9B7 1793 aa20.2■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Adcy10Q8C0T9 1614 aa20.2■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Plekhg3Q4VAC9 1341 aa20.19■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Lemd3Q9WU40 921 aa20.18■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Tdrd9Q14BI7 1383 aa20.18■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 OvosQ3UU35 1456 aa20.18■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Cdk11bP24788 784 aaKnown RBP20.17■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Kdm5cP41230 1554 aa20.16■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Trappc8E9PWG2 1437 aa20.15■□□□□ 0.82
Pfdn1-201ENSMUST00000025204 Arhgef40Q3UPH7 1517 aa20.13■□□□□ 0.81
Pfdn1-201ENSMUST00000025204 Dnajc5gQ8C632 165 aa20.13■□□□□ 0.81
Pfdn1-201ENSMUST00000025204 Atp10aO54827 1508 aa20.11■□□□□ 0.81
Pfdn1-201ENSMUST00000025204 Naip2Q9QUK4 1447 aa20.1■□□□□ 0.81
Pfdn1-201ENSMUST00000025204 Kif14L0N7N1 1674 aaKnown RBP20.07■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Hecw1Q8K4P8 1604 aa20.05■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Zmym4A2A791 1549 aaKnown RBP20.05■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Kdm6bQ5NCY0 1641 aa20.04■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Dip2cE9PWR4 1557 aa20.04■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 RereQ80TZ9 1558 aa20.04■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Ptch1Q61115 1434 aa20.03■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Sart1Q9Z315 806 aaKnown RBP20.03■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Cul9Q80TT8 1865 aa20.03■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Plppr3Q7TPB0 716 aa20.02■□□□□ 0.8
Pfdn1-201ENSMUST00000025204 Cdc42bpbQ7TT50 1713 aa20.01■□□□□ 0.79
Pfdn1-201ENSMUST00000025204 Yeats2Q3TUF7 1407 aa20■□□□□ 0.79
Pfdn1-201ENSMUST00000025204 NpatQ8BMA5 1420 aa20■□□□□ 0.79
Pfdn1-201ENSMUST00000025204 Qser1A2BIE1 1698 aa20■□□□□ 0.79
Pfdn1-201ENSMUST00000025204 Neurl4Q5NCX5 1563 aa20■□□□□ 0.79
Pfdn1-201ENSMUST00000025204 Adamtsl3G3UXC7 1706 aa19.96■□□□□ 0.79
Pfdn1-201ENSMUST00000025204 Abcc5Q9R1X5 1436 aa19.95■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 Mast1Q9R1L5 1570 aa19.95■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 3425401B19RikD3Z1D3 1412 aa19.93■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 Camsap2Q8C1B1 1461 aa19.93■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 Mtus2Q3UHD3 1353 aa19.93■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 Nos1Q9Z0J4 1429 aa19.93■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 Plekhh2Q8C115 1491 aa19.92■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 Cdc42bpgQ80UW5 1551 aa19.92■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 Fhod3Q76LL6 1578 aa19.91■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 Prdm16A2A935 1275 aa19.91■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 SphkapQ6NSW3 1687 aa19.9■□□□□ 0.78
Pfdn1-201ENSMUST00000025204 MlecQ6ZQI3 291 aaKnown RBP19.89■□□□□ 0.77
Pfdn1-201ENSMUST00000025204 Trpm1Q2TV84 1622 aa19.88■□□□□ 0.77
Pfdn1-201ENSMUST00000025204 Il16O54824 1322 aa19.87■□□□□ 0.77
Pfdn1-201ENSMUST00000025204 Fmn2Q9JL04 1578 aa19.86■□□□□ 0.77
Pfdn1-201ENSMUST00000025204 Map3k5O35099 1380 aa19.84■□□□□ 0.77
Pfdn1-201ENSMUST00000025204 Adgrl2Q8JZZ7 1487 aa19.84■□□□□ 0.77
Pfdn1-201ENSMUST00000025204 Znf518aB2RRF6 1478 aaKnown RBP19.81■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Dennd4bQ3U1Y4 1499 aa19.81■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Talpid3E9PV87 1520 aa19.8■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Cfap65Q3V0B4 1847 aa19.79■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Naip6Q9JIB6 1403 aa19.79■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Rrp7aQ9D1C9 280 aaKnown RBP19.79■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Gli2Q0VGT2 1544 aa19.79■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Xrn1P97789 1719 aaKnown RBP19.79■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Brwd3A2AHJ4 1799 aa19.78■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Plch2A2AP18 1501 aa19.78■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Cabp1Q9JLK7 227 aa19.78■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Kdm3bQ6ZPY7 1562 aa19.77■□□□□ 0.76
Pfdn1-201ENSMUST00000025204 Uggt2E9Q4X2 1504 aa19.76■□□□□ 0.75
Pfdn1-201ENSMUST00000025204 Abca17E9PX95 1733 aa19.74■□□□□ 0.75
Pfdn1-201ENSMUST00000025204 Topbp1Q6ZQF0 1515 aa19.74■□□□□ 0.75
Pfdn1-201ENSMUST00000025204 UacaQ8CGB3 1411 aa19.74■□□□□ 0.75
Pfdn1-201ENSMUST00000025204 Safb2Q80YR5 991 aaKnown RBP19.73■□□□□ 0.75
Pfdn1-201ENSMUST00000025204 Myom2Q14BI5 1463 aa19.73■□□□□ 0.75
Pfdn1-201ENSMUST00000025204 Rsph4aQ8BYM7 716 aa19.72■□□□□ 0.75
Pfdn1-201ENSMUST00000025204 Adgrb2Q8CGM1 1561 aa19.71■□□□□ 0.75
Pfdn1-201ENSMUST00000025204 Rfx7F8VPJ6 1459 aa19.7■□□□□ 0.74
Pfdn1-201ENSMUST00000025204 PtprmP28828 1452 aa19.7■□□□□ 0.74
Pfdn1-201ENSMUST00000025204 Abca6Q8K441 1624 aa19.69■□□□□ 0.74
Pfdn1-201ENSMUST00000025204 Supt6hQ62383 1726 aaKnown RBP19.69■□□□□ 0.74
Pfdn1-201ENSMUST00000025204 Spag9Q58A65 1321 aaKnown RBP19.69■□□□□ 0.74
Pfdn1-201ENSMUST00000025204 Ssh2Q5SW75 1423 aa19.68■□□□□ 0.74
Pfdn1-201ENSMUST00000025204 Trpm2Q91YD4 1506 aa19.67■□□□□ 0.74
Pfdn1-201ENSMUST00000025204 UbtfP25976 765 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 59.7 ms