RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Smg6P61406 1418 aaKnown RBP21.05■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 Arhgef40Q3UPH7 1517 aa21.05■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 Rapgef6Q5NCJ1 1609 aa21.05■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 Nup160Q9Z0W3 1402 aaKnown RBP21.04■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 Arhgap27A2AB59 869 aa21.03■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 Pkd2O35245 966 aa21.02■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 Usp47Q8BY87 1376 aa21.01■□□□□ 0.95
Nkx3-1-201ENSMUST00000022646 Kdm6bQ5NCY0 1641 aa21■□□□□ 0.95
Nkx3-1-201ENSMUST00000022646 Pprc1Q6NZN1 1644 aa20.99■□□□□ 0.95
Nkx3-1-201ENSMUST00000022646 Mtus2Q3UHD3 1353 aa20.99■□□□□ 0.95
Nkx3-1-201ENSMUST00000022646 Pbrm1Q8BSQ9 1634 aaKnown RBP20.98■□□□□ 0.95
Nkx3-1-201ENSMUST00000022646 Rprd2Q6NXI6 1469 aaKnown RBP20.97■□□□□ 0.95
Nkx3-1-201ENSMUST00000022646 Arhgef11Q68FM7 1552 aa20.96■□□□□ 0.95
Nkx3-1-201ENSMUST00000022646 Shroom2A2ALU4 1481 aa20.95■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 SphkapQ6NSW3 1687 aa20.95■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Adcy10Q8C0T9 1614 aa20.95■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Cdc42bpaQ3UU96 1719 aa20.94■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Abcc2Q8VI47 1543 aa20.94■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Slc24a1Q91WD8 1130 aa20.93■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Kdm3bQ6ZPY7 1562 aa20.91■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Il16O54824 1322 aa20.9■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Arhgap31A6X8Z5 1425 aa20.9■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Kiaa1551Q5DTW7 1521 aa20.9■□□□□ 0.94
Nkx3-1-201ENSMUST00000022646 Cc2d2bA0A286YDU8 1405 aa20.89■□□□□ 0.93
Nkx3-1-201ENSMUST00000022646 Ncoa1P70365 1447 aa20.89■□□□□ 0.93
Nkx3-1-201ENSMUST00000022646 Adgrb2Q8CGM1 1561 aa20.89■□□□□ 0.93
Nkx3-1-201ENSMUST00000022646 Pik3c2gO70167 1506 aa20.87■□□□□ 0.93
Nkx3-1-201ENSMUST00000022646 Lamc1P02468 1607 aaKnown RBP20.86■□□□□ 0.93
Nkx3-1-201ENSMUST00000022646 AlkP97793 1621 aa20.86■□□□□ 0.93
Nkx3-1-201ENSMUST00000022646 Dhx57Q6P5D3 1388 aaKnown RBP20.83■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Magi1Q6RHR9 1471 aa20.82■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Kif21bQ9QXL1 1668 aa20.81■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Lrriq1Q0P5X1 1673 aa20.8■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Dhx9O70133 1380 aaKnown RBP20.79■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Ccdc141E9Q8Q6 1531 aa20.79■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Calr4Q3TQS0 420 aa20.78■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Mrs2Q5NCE8 434 aa20.78■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Fam163aQ8CAA5 168 aa20.78■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Mroh2aD3Z750 1679 aa20.78■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Prex2Q3LAC4 1598 aa20.78■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Mapkbp1Q6NS57 1503 aa20.77■□□□□ 0.92
Nkx3-1-201ENSMUST00000022646 Ttll5Q8CHB8 1328 aa20.76■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Rgl3Q3UYI5 709 aa20.76■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Tdrd9Q14BI7 1383 aa20.76■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Arhgef12Q8R4H2 1543 aaKnown RBP20.75■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Gm13695A2AK44 830 aa20.74■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Trak1Q6PD31 939 aa20.74■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Fam71e1A1L3C1 212 aa20.73■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Supt6hQ62383 1726 aaKnown RBP20.73■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Wwc2Q6NXJ0 1187 aa20.73■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Kif14L0N7N1 1674 aaKnown RBP20.73■□□□□ 0.91
Nkx3-1-201ENSMUST00000022646 Mlh3A0A1Y7VMP7 1443 aa20.7■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Slc4a2P13808 1237 aaKnown RBP20.7■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Dapk1Q80YE7 1442 aa20.7■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Fkbp15Q6P9Q6 1216 aaKnown RBP20.69■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Exoc6Q8R313 802 aa20.69■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Map3k4O08648 1597 aa20.69■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Zcchc11B2RX14 1644 aaKnown RBP20.69■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Mbd5B1AYB6 1498 aa20.68■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Anp32aO35381 247 aa20.68■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Nup155Q99P88 1391 aaKnown RBP20.68■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Cwc22Q8C5N3 908 aaKnown RBP20.67■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Myt1Q8CFC2 1127 aa20.67■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Rundc1Q0VDN7 615 aa20.66■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 NrdcQ8BHG1 1161 aa20.66■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Caskin1Q6P9K8 1431 aa20.66■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Eif5bQ05D44 1216 aaKnown RBP20.65■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Trpm2Q91YD4 1506 aa20.65■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Mug2P28666 1451 aa20.65■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Wdr7Q920I9 1489 aa20.64■□□□□ 0.9
Nkx3-1-201ENSMUST00000022646 Neo1P97798 1493 aa20.64■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 Rusc2Q80U22 1514 aa20.63■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 Dnmt1P13864 1620 aaKnown RBP20.63■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 Jph4Q80WT0 628 aa20.62■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 Map4P27546 1125 aaKnown RBP20.61■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 Plekhg5Q66T02 1073 aa20.61■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 Card11Q8CIS0 1159 aa20.61■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 PnisrA2AJT4 805 aaKnown RBP20.59■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 Grwd1Q810D6 446 aaKnown RBP20.59■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 Naip6Q9JIB6 1403 aa20.58■□□□□ 0.89
Nkx3-1-201ENSMUST00000022646 DroshaQ5HZJ0 1373 aaKnown RBP20.57■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Fmn2Q9JL04 1578 aa20.56■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Fancd2Q80V62 1450 aa20.56■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Cdk13Q69ZA1 1511 aaKnown RBP20.55■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Nolc1E9Q5C9 702 aaKnown RBP20.55■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Washc2Q6PGL7 1334 aa20.55■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 AknaQ80VW7 1404 aa20.55■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Zbtb7cQ8VCZ7 619 aa20.54■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Rrbp1Q99PL5 1605 aaKnown RBP20.53■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Myom3A2ABU4 1439 aa20.52■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 Fam208aQ69ZR9 1610 aaKnown RBP20.52■□□□□ 0.88
Nkx3-1-201ENSMUST00000022646 P3h3Q8CG70 732 aa20.51■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 RalgapbQ8BQZ4 1484 aa20.5■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 Rrp7aQ9D1C9 280 aaKnown RBP20.5■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 Adgrl2Q8JZZ7 1487 aa20.49■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 Lrrc9Q8CDN9 1456 aa20.49■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 Ssh2Q5SW75 1423 aa20.48■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 Dot1lQ6XZL8 1540 aa20.48■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 PtprgQ05909 1442 aa20.47■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 Cpsf1Q9EPU4 1441 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms