RNA–Protein interactions for RNA: snR9

snR9, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR9, Length 187 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR9	snR9	EST1	P17214	699 aa	Predicted RBP	3	□□□□□ -1.93
snR9	snR9	AAC3	P18238	307 aa		3	□□□□□ -1.93
snR9	snR9	SEF1	P34228	1148 aa		3	□□□□□ -1.93
snR9	snR9	YBR139W	P38109	508 aa		3	□□□□□ -1.93
snR9	snR9	SDS24	P38314	527 aa		3	□□□□□ -1.93
snR9	snR9	ALG5	P40350	334 aa		3	□□□□□ -1.93
snR9	snR9	AIM22	P47051	409 aa		3	□□□□□ -1.93
snR9	snR9	UPF3	P48412	387 aa	Known RBP	3	□□□□□ -1.93
snR9	snR9	IMD4	P50094	524 aa	Known RBP	3	□□□□□ -1.93
snR9	snR9	BOR1	P53838	576 aa		3	□□□□□ -1.93
snR9	snR9	IPI3	P53877	555 aa		3	□□□□□ -1.93
snR9	snR9	IVY1	Q04934	453 aa		3	□□□□□ -1.93
snR9	snR9	MRPL51	Q06090	140 aa	Predicted RBP	3	□□□□□ -1.93
snR9	snR9	RSA1	Q08932	381 aa		3	□□□□□ -1.93
snR9	snR9	YLL056C	Q12177	298 aa		3	□□□□□ -1.93
snR9	snR9	CBS2	P14905	389 aa		2.99	□□□□□ -1.93
snR9	snR9	SAN1	P22470	610 aa		2.99	□□□□□ -1.93
snR9	snR9	ELO2	P25358	347 aa		2.99	□□□□□ -1.93
snR9	snR9	YCR022C	P25620	114 aa		2.99	□□□□□ -1.93
snR9	snR9	PMU1	P36069	295 aa		2.99	□□□□□ -1.93
snR9	snR9	PCA1	P38360	1216 aa		2.99	□□□□□ -1.93
snR9	snR9	TIF4631	P39935	952 aa	Known RBP	2.99	□□□□□ -1.93
snR9	snR9	NOP16	P40007	231 aa	Known RBP	2.99	□□□□□ -1.93
snR9	snR9	VID27	P40157	782 aa		2.99	□□□□□ -1.93
snR9	snR9	ALK1	P43633	760 aa	Known RBP	2.99	□□□□□ -1.93
snR9	snR9	YJL132W	P47014	750 aa		2.99	□□□□□ -1.93
snR9	snR9	SVL3	Q03088	825 aa	Known RBP	2.99	□□□□□ -1.93
snR9	snR9	THP1	Q08231	455 aa		2.99	□□□□□ -1.93
snR9	snR9	YDR056C	Q12025	205 aa		2.99	□□□□□ -1.93
snR9	snR9	SEC53	P07283	254 aa	Known RBP	2.98	□□□□□ -1.93
snR9	snR9	ATR1	P13090	542 aa		2.98	□□□□□ -1.93
snR9	snR9	UTR4	P32626	227 aa		2.98	□□□□□ -1.93
snR9	snR9	SHP1	P34223	423 aa		2.98	□□□□□ -1.93
snR9	snR9	TIF5	P38431	405 aa	Known RBP	2.98	□□□□□ -1.93
snR9	snR9	NPR2	P39923	615 aa		2.98	□□□□□ -1.93
snR9	snR9	SHO1	P40073	367 aa		2.98	□□□□□ -1.93
snR9	snR9	RPC11	Q04307	110 aa	Predicted RBP	2.98	□□□□□ -1.93
snR9	snR9	PHO92	Q06390	306 aa		2.98	□□□□□ -1.93
snR9	snR9	RLM1	Q12224	676 aa		2.98	□□□□□ -1.93
snR9	snR9	LSP1	Q12230	341 aa	Known RBP	2.98	□□□□□ -1.93
snR9	snR9	PUT3	P25502	979 aa	Predicted RBP	2.97	□□□□□ -1.93
snR9	snR9	MSN2	P33748	704 aa		2.97	□□□□□ -1.93
snR9	snR9	TUL1	P36096	758 aa		2.97	□□□□□ -1.93
snR9	snR9	TCD2	P36101	447 aa	Known RBP	2.97	□□□□□ -1.93
snR9	snR9	NOP4	P37838	685 aa	Known RBP	2.97	□□□□□ -1.93
snR9	snR9	BNA4	P38169	460 aa		2.97	□□□□□ -1.93
snR9	snR9	ALG8	P40351	577 aa		2.97	□□□□□ -1.93
snR9	snR9	IDP2	P41939	412 aa		2.97	□□□□□ -1.93
snR9	snR9	MRX6	P48564	524 aa		2.97	□□□□□ -1.93
snR9	snR9	TOF2	Q02208	771 aa		2.97	□□□□□ -1.93
snR9	snR9	CTI6	Q08923	506 aa		2.97	□□□□□ -1.93
snR9	snR9	RCN2	Q12044	265 aa		2.97	□□□□□ -1.93
snR9	snR9	CFT2	Q12102	859 aa	Predicted RBP	2.97	□□□□□ -1.93
snR9	snR9	ENT1	Q12518	454 aa		2.97	□□□□□ -1.93
snR9	snR9	YJR112W-A	Q3E743	109 aa		2.97	□□□□□ -1.93
snR9	snR9	OLE1	P21147	510 aa	Known RBP	2.96	□□□□□ -1.94
snR9	snR9	RNA14	P25298	677 aa	Known RBP	2.96	□□□□□ -1.94
snR9	snR9	PRD1	P25375	712 aa		2.96	□□□□□ -1.94
snR9	snR9	DUG2	P38149	878 aa		2.96	□□□□□ -1.94
snR9	snR9	TCM62	P38228	572 aa	Known RBP	2.96	□□□□□ -1.94
snR9	snR9	MUM2	P38236	366 aa		2.96	□□□□□ -1.94
snR9	snR9	YBP1	P38315	674 aa		2.96	□□□□□ -1.94
snR9	snR9	MSR1	P38714	643 aa		2.96	□□□□□ -1.94
snR9	snR9	HAT2	P39984	401 aa		2.96	□□□□□ -1.94
snR9	snR9	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
snR9	snR9	SPG5	P42933	373 aa		2.96	□□□□□ -1.94
snR9	snR9	YPI1	P43587	155 aa		2.96	□□□□□ -1.94
snR9	snR9	GPI1	P53306	609 aa		2.96	□□□□□ -1.94
snR9	snR9	HEF3	P53978	1044 aa	Known RBP	2.96	□□□□□ -1.94
snR9	snR9	IRC15	Q02733	499 aa		2.96	□□□□□ -1.94
snR9	snR9	FIN1	Q03898	291 aa		2.96	□□□□□ -1.94
snR9	snR9	RBS1	Q05672	457 aa	Known RBP	2.96	□□□□□ -1.94
snR9	snR9	VPS74	Q06385	345 aa		2.96	□□□□□ -1.94
snR9	snR9	YCL021W-A	Q96VH3	125 aa		2.96	□□□□□ -1.94
snR9	snR9	CBS1	P14066	229 aa		2.95	□□□□□ -1.94
snR9	snR9	HSC82	P15108	705 aa	Known RBP	2.95	□□□□□ -1.94
snR9	snR9	EXO70	P19658	623 aa		2.95	□□□□□ -1.94
snR9	snR9	PAP1	P29468	568 aa	Known RBP	2.95	□□□□□ -1.94
snR9	snR9	REG2	P38232	338 aa		2.95	□□□□□ -1.94
snR9	snR9	GWT1	P47026	490 aa		2.95	□□□□□ -1.94
snR9	snR9	YGR066C	P53242	292 aa		2.95	□□□□□ -1.94
snR9	snR9	WSC2	P53832	503 aa		2.95	□□□□□ -1.94
snR9	snR9	KEL3	Q08979	651 aa	Predicted RBP	2.95	□□□□□ -1.94
snR9	snR9	CTF3	Q12748	733 aa		2.95	□□□□□ -1.94
snR9	snR9	COR1	P07256	457 aa		2.94	□□□□□ -1.94
snR9	snR9	PRP2	P20095	876 aa	Predicted RBP	2.94	□□□□□ -1.94
snR9	snR9	WBP1	P33767	430 aa	Known RBP	2.94	□□□□□ -1.94
snR9	snR9	ELP2	P42935	788 aa		2.94	□□□□□ -1.94
snR9	snR9	RBG2	P53295	368 aa	Known RBP	2.94	□□□□□ -1.94
snR9	snR9	MSO1	P53604	210 aa	Known RBP	2.94	□□□□□ -1.94
snR9	snR9	VPS75	P53853	264 aa		2.94	□□□□□ -1.94
snR9	snR9	VPS38	Q05919	439 aa		2.94	□□□□□ -1.94
snR9	snR9	AVL9	Q12500	764 aa		2.94	□□□□□ -1.94
snR9	snR9	RAV1	P47104	1357 aa		2.93	□□□□□ -1.94
snR9	snR9	MES1	P00958	751 aa	Known RBP	2.93	□□□□□ -1.94
snR9	snR9	GAL80	P04387	435 aa		2.93	□□□□□ -1.94
snR9	snR9	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	not detected
snR9	snR9	PMR1	P13586	950 aa		2.93	□□□□□ -1.94
snR9	snR9	GLK1	P17709	500 aa	Known RBP	2.93	□□□□□ -1.94
snR9	snR9	YME1	P32795	747 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms