RNA–Protein interactions for RNA: YPR030W

CSR2, Transcript of Nuclear ubiquitin protein ligase binding protein, yeast

Gene CSR2, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cellular bud, Mitochondria .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSR2	YPR030W	UTP7	P40055	554 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	YJL218W	P40892	196 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	THI12	P42883	340 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	THI5	P43534	340 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	IRC6	P43615	237 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	AIM23	P47015	356 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	AAD10	P47182	288 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	THI11	P47183	340 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	SCY1	P53009	804 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	BSC5	P53755	489 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	IGO1	P53897	168 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	BSC2	Q05611	235 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	YDL073W	Q07454	984 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	THI13	Q07748	340 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	AVO1	Q08236	1176 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	HRK1	Q08732	759 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	FEX2	Q08991	375 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	ENV7	Q12003	364 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	YGK3	Q12222	375 aa	Predicted RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	SET6	Q12529	373 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	YMR030W-A	Q3E760	96 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	CMC2	Q3E7A4	109 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	CYC1	P00044	109 aa	Predicted RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	ILV1	P00927	576 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	ADE5,7	P07244	802 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	ERR1	P0CX10	437 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	ERR2	P0CX11	437 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	TRX1	P22217	103 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	VPS34	P22543	875 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	PGS1	P25578	521 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	TAH1	P25638	111 aa	Predicted RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	KRE2	P27809	442 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	CHS3	P29465	1165 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	NTG1	P31378	399 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	PTI1	P39927	425 aa	Predicted RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	AVT2	P39981	480 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	ALD5	P40047	520 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	GID8	P40208	455 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	PRE6	P40303	254 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	ERR3	P42222	437 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	BNA1	P47096	177 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	STB4	P50104	949 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	SCW11	P53189	542 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	TAM41	P53230	385 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	DAM1	P53267	343 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	RSC4	Q02206	625 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	RPL6A	Q02326	176 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	SPP1	Q03012	353 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	UGO1	Q03327	502 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	YOR352W	Q08816	343 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	YPL199C	Q08954	240 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	AEP3	Q12089	606 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	SKM1	Q12469	655 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	PFK27	Q12471	397 aa	Predicted RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	SAS5	Q99314	248 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	RPS4A	P0CX35	261 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	RPS4B	P0CX36	261 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	BAR1	P12630	587 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
CSR2	YPR030W	ACE2	P21192	770 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	LEU5	P38702	357 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
CSR2	YPR030W	GEP4	P38812	185 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	ORC6	P38826	435 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	GTT3	P39996	337 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	SER2	P42941	309 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	OCA1	P50946	238 aa	Predicted RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	ALT2	P52892	507 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	FMP48	P53233	369 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	REX2	P54964	269 aa	Known RBP	3.12	□□□□□ -1.91
CSR2	YPR030W	AIM36	Q03798	255 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	SNX41	Q04053	625 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	PDR8	Q06149	701 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	APC5	Q08683	685 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	PIN2	Q12057	282 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	LDB19	Q12502	818 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	FRT1	Q99332	602 aa		3.12	□□□□□ -1.91
CSR2	YPR030W	ADE4	P04046	510 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	PUT2	P07275	575 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YGL041W-A	P0C5N3	154 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	GRX2	P17695	143 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	APA2	P22108	325 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	SED4	P25365	1065 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	PPZ1	P26570	692 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	SER1	P33330	395 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	LST4	P34239	828 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	MTC2	P34246	357 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	TDP1	P38319	544 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	BIG1	P38813	335 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	KEL1	P38853	1164 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	FAD1	P38913	306 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	DUN1	P39009	513 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	DOT6	P40059	670 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	ALY2	P47029	1046 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	MPS3	P47069	682 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YGL036W	P53185	909 aa	Predicted RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	LSB1	P53281	241 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	DBP6	P53734	629 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	HXT15	P54854	567 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	CDC55	Q00362	526 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 31 ms