RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C ALT2P52892 507 aa2.87□□□□□ -1.95
SHE4YOR035C COQ9Q05779 260 aa2.87□□□□□ -1.95
SHE4YOR035C MED1Q12321 566 aa2.87□□□□□ -1.95
SHE4YOR035C RRI2Q12348 645 aa2.87□□□□□ -1.95
SHE4YOR035C AVL9Q12500 764 aa2.87□□□□□ -1.95
SHE4YOR035C SSK2P53599 1579 aa2.86□□□□□ -1.95
SHE4YOR035C PEP4P07267 405 aaKnown RBP2.86□□□□□ -1.95
SHE4YOR035C MET8P15807 274 aa2.86□□□□□ -1.95
SHE4YOR035C PAP1P29468 568 aaKnown RBP2.86□□□□□ -1.95
SHE4YOR035C PRO3P32263 286 aaKnown RBP2.86□□□□□ -1.95
SHE4YOR035C YME1P32795 747 aa2.86□□□□□ -1.95
SHE4YOR035C YHR210CP38893 341 aa2.86□□□□□ -1.95
SHE4YOR035C TIM10P87108 93 aa2.86□□□□□ -1.95
SHE4YOR035C TOF2Q02208 771 aa2.86□□□□□ -1.95
SHE4YOR035C YMR087WQ04299 284 aa2.86□□□□□ -1.95
SHE4YOR035C THP1Q08231 455 aa2.86□□□□□ -1.95
SHE4YOR035C FOB1O13329 566 aa2.86□□□□□ -1.95
SHE4YOR035C DFR1P07807 211 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SHE4YOR035C APE1P14904 514 aa2.86□□□□□ -1.95
SHE4YOR035C MSR1P38714 643 aa2.86□□□□□ -1.95
SHE4YOR035C ALK1P43633 760 aaKnown RBP2.86□□□□□ -1.95
SHE4YOR035C RPC11Q04307 110 aaPredicted RBP2.86□□□□□ -1.95
SHE4YOR035C IMH1Q06704 911 aaKnown RBP2.86□□□□□ -1.95
SHE4YOR035C NCE102Q12207 173 aaRIP-Chip data2.86□□□□□ -1.95not detected
SHE4YOR035C YOR093CQ12275 1648 aa2.86□□□□□ -1.95
SHE4YOR035C CAR1P00812 333 aaKnown RBP2.85□□□□□ -1.95
SHE4YOR035C OCA4P25366 362 aa2.85□□□□□ -1.95
SHE4YOR035C SWE1P32944 819 aa2.85□□□□□ -1.95
SHE4YOR035C SHP1P34223 423 aa2.85□□□□□ -1.95
SHE4YOR035C VPS52P39904 641 aa2.85□□□□□ -1.95
SHE4YOR035C NPR2P39923 615 aa2.85□□□□□ -1.95
SHE4YOR035C CSM2P40465 213 aa2.85□□□□□ -1.95
SHE4YOR035C ARE2P53629 642 aaKnown RBP2.85□□□□□ -1.95
SHE4YOR035C YDR239CQ03780 787 aa2.85□□□□□ -1.95
SHE4YOR035C YOR365CQ08844 703 aa2.85□□□□□ -1.95
SHE4YOR035C RAD52P06778 471 aaKnown RBP2.85□□□□□ -1.95
SHE4YOR035C PTR2P32901 601 aa2.85□□□□□ -1.95
SHE4YOR035C SCD6P45978 349 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95 RIP-Chip
SHE4YOR035C AIM22P47051 409 aa2.85□□□□□ -1.95
SHE4YOR035C PET130P47065 347 aa2.85□□□□□ -1.95
SHE4YOR035C FIN1Q03898 291 aa2.85□□□□□ -1.95
SHE4YOR035C IVY1Q04934 453 aa2.85□□□□□ -1.95
SHE4YOR035C ELO2P25358 347 aa2.84□□□□□ -1.95
SHE4YOR035C CST26P38226 397 aa2.84□□□□□ -1.95
SHE4YOR035C OSH3P38713 996 aaKnown RBP2.84□□□□□ -1.95
SHE4YOR035C DRN1P53255 507 aaKnown RBP2.84□□□□□ -1.95
SHE4YOR035C YMR230W-AQ3E7B5 62 aa2.84□□□□□ -1.95
SHE4YOR035C ARG3P05150 338 aa2.83□□□□□ -1.96
SHE4YOR035C PRD1P25375 712 aa2.83□□□□□ -1.96
SHE4YOR035C FRE1P32791 686 aa2.83□□□□□ -1.96
SHE4YOR035C WBP1P33767 430 aaKnown RBP2.83□□□□□ -1.96
SHE4YOR035C SIP2P34164 415 aaKnown RBP2.83□□□□□ -1.96
SHE4YOR035C BNA4P38169 460 aa2.83□□□□□ -1.96
SHE4YOR035C CCT4P39078 528 aaKnown RBP2.83□□□□□ -1.96
SHE4YOR035C YJR154WP47181 346 aa2.83□□□□□ -1.96
SHE4YOR035C CAF130P53280 1122 aaPredicted RBP2.83□□□□□ -1.96
SHE4YOR035C YML133CQ03099 1374 aa2.83□□□□□ -1.96
SHE4YOR035C YLL067CQ07888 1374 aa2.83□□□□□ -1.96
SHE4YOR035C YLL066CQ99208 1374 aa2.83□□□□□ -1.96
SHE4YOR035C DNF2Q12675 1612 aa2.83□□□□□ -1.96
SHE4YOR035C PHO2P07269 559 aa2.83□□□□□ -1.96
SHE4YOR035C MRS3P10566 314 aa2.83□□□□□ -1.96
SHE4YOR035C MRP7P12687 371 aa2.83□□□□□ -1.96
SHE4YOR035C MTF1P14908 341 aaKnown RBP2.83□□□□□ -1.96
SHE4YOR035C NDC1P32500 655 aa2.83□□□□□ -1.96
SHE4YOR035C NAB3P38996 802 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SHE4YOR035C TIF4631P39935 952 aaKnown RBP2.83□□□□□ -1.96
SHE4YOR035C SPO22P40511 975 aa2.83□□□□□ -1.96
SHE4YOR035C MET28P40573 187 aa2.83□□□□□ -1.96
SHE4YOR035C ARF3P40994 183 aaRIP-Chip data2.83□□□□□ -1.96 RIP-Chip
SHE4YOR035C COR1P07256 457 aa2.82□□□□□ -1.96
SHE4YOR035C MSN2P33748 704 aa2.82□□□□□ -1.96
SHE4YOR035C YEL057CP39983 233 aa2.82□□□□□ -1.96
SHE4YOR035C ZPR1P53303 486 aaKnown RBP2.82□□□□□ -1.96
SHE4YOR035C RLI1Q03195 608 aaKnown RBP2.82□□□□□ -1.96
SHE4YOR035C SLD5Q03406 294 aa2.82□□□□□ -1.96
SHE4YOR035C LSP1Q12230 341 aaKnown RBP2.82□□□□□ -1.96
SHE4YOR035C HSC82P15108 705 aaKnown RBP2.82□□□□□ -1.96
SHE4YOR035C PRP2P20095 876 aaPredicted RBP2.82□□□□□ -1.96
SHE4YOR035C YCR007CP25354 239 aa2.82□□□□□ -1.96
SHE4YOR035C DUG2P38149 878 aa2.82□□□□□ -1.96
SHE4YOR035C TCM62P38228 572 aaKnown RBP2.82□□□□□ -1.96
SHE4YOR035C RTT101P47050 842 aa2.82□□□□□ -1.96
SHE4YOR035C HEF3P53978 1044 aaKnown RBP2.82□□□□□ -1.96
SHE4YOR035C PHO92Q06390 306 aa2.82□□□□□ -1.96
SHE4YOR035C RAV1P47104 1357 aa2.82□□□□□ -1.96
SHE4YOR035C ATG2P53855 1592 aa2.82□□□□□ -1.96
SHE4YOR035C RPL15AP05748 204 aaKnown RBP2.81□□□□□ -1.96
SHE4YOR035C BUD14P27637 709 aa2.81□□□□□ -1.96
SHE4YOR035C RPN12P32496 274 aa2.81□□□□□ -1.96
SHE4YOR035C MDM31P38880 579 aa2.81□□□□□ -1.96
SHE4YOR035C DHH1P39517 506 aaKnown RBP2.81□□□□□ -1.96
SHE4YOR035C NDE1P40215 560 aa2.81□□□□□ -1.96
SHE4YOR035C RPM2Q02773 1202 aa2.81□□□□□ -1.96
SHE4YOR035C PDS5Q04264 1277 aa2.81□□□□□ -1.96
SHE4YOR035C MRPL51Q06090 140 aaPredicted RBP2.81□□□□□ -1.96
SHE4YOR035C YTH1Q06102 208 aaPredicted RBP2.81□□□□□ -1.96
SHE4YOR035C TSR2Q06672 205 aaKnown RBP2.81□□□□□ -1.96
SHE4YOR035C SYO1Q07395 620 aa2.81□□□□□ -1.96
SHE4YOR035C PPT2Q12036 173 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms