RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C RPS7BP48164 190 aaKnown RBP3.4□□□□□ -1.87
VPS33YLR396C ALF1P53904 254 aa3.4□□□□□ -1.87
VPS33YLR396C ZDS2P54786 942 aa3.4□□□□□ -1.87
VPS33YLR396C KRE28Q04431 385 aa3.4□□□□□ -1.87
VPS33YLR396C VPS38Q05919 439 aa3.4□□□□□ -1.87
VPS33YLR396C ARR1Q06596 294 aa3.4□□□□□ -1.87
VPS33YLR396C TCO89Q08921 799 aa3.4□□□□□ -1.87
VPS33YLR396C URB1P34241 1764 aaKnown RBP3.39□□□□□ -1.87
VPS33YLR396C SAC3P46674 1301 aa3.39□□□□□ -1.87
VPS33YLR396C RAD5P32849 1169 aaPredicted RBP3.39□□□□□ -1.87
VPS33YLR396C LOS1P33418 1100 aaPredicted RBP3.39□□□□□ -1.87
VPS33YLR396C LEU5P38702 357 aa3.39□□□□□ -1.87
VPS33YLR396C BUR6P40096 142 aa3.39□□□□□ -1.87
VPS33YLR396C YIL001WP40560 513 aa3.39□□□□□ -1.87
VPS33YLR396C TIM11P81449 96 aaPredicted RBP3.39□□□□□ -1.87
VPS33YLR396C MAK10Q02197 733 aa3.39□□□□□ -1.87
VPS33YLR396C ADA2Q02336 434 aa3.39□□□□□ -1.87
VPS33YLR396C YMR178WQ03219 274 aaKnown RBP3.39□□□□□ -1.87
VPS33YLR396C IMH1Q06704 911 aaKnown RBP3.39□□□□□ -1.87
VPS33YLR396C HER1Q12276 1246 aa3.39□□□□□ -1.87
VPS33YLR396C YBR126W-AQ8TGU7 68 aa3.39□□□□□ -1.87
VPS33YLR396C MCM4P30665 933 aaKnown RBP3.39□□□□□ -1.87
VPS33YLR396C NFU1P32860 256 aa3.39□□□□□ -1.87
VPS33YLR396C AUR1P36107 401 aaPredicted RBP3.39□□□□□ -1.87
VPS33YLR396C MNN2P38069 597 aa3.39□□□□□ -1.87
VPS33YLR396C YBL029WP38201 376 aa3.39□□□□□ -1.87
VPS33YLR396C PCI8P40512 444 aa3.39□□□□□ -1.87
VPS33YLR396C VPS25P47142 202 aa3.39□□□□□ -1.87
VPS33YLR396C NGL3Q03210 505 aa3.39□□□□□ -1.87
VPS33YLR396C MRPL1Q04599 285 aa3.39□□□□□ -1.87
VPS33YLR396C NOP6Q07623 225 aaKnown RBP3.39□□□□□ -1.87
VPS33YLR396C GEP3Q08622 556 aa3.39□□□□□ -1.87
VPS33YLR396C AFT2Q08957 416 aa3.39□□□□□ -1.87
VPS33YLR396C NMD4Q12129 218 aa3.39□□□□□ -1.87
VPS33YLR396C SPE4Q12455 300 aa3.39□□□□□ -1.87
VPS33YLR396C TY1B-NL2Q99337 1749 aaKnown RBP3.38□□□□□ -1.87
VPS33YLR396C ASK1P35734 292 aa3.38□□□□□ -1.87
VPS33YLR396C YKL050CP35736 922 aa3.38□□□□□ -1.87
VPS33YLR396C YKT6P36015 200 aaKnown RBP3.38□□□□□ -1.87
VPS33YLR396C ARP1P38696 384 aa3.38□□□□□ -1.87
VPS33YLR396C SPC97P38863 823 aa3.38□□□□□ -1.87
VPS33YLR396C SPO22P40511 975 aa3.38□□□□□ -1.87
VPS33YLR396C HXT9P40885 567 aa3.38□□□□□ -1.87
VPS33YLR396C LYS20P48570 428 aaKnown RBP3.38□□□□□ -1.87
VPS33YLR396C STR3P53101 465 aaKnown RBP3.38□□□□□ -1.87
VPS33YLR396C MMR1Q06324 491 aa3.38□□□□□ -1.87
VPS33YLR396C GGA1Q06336 557 aa3.38□□□□□ -1.87
VPS33YLR396C VAC14Q06708 880 aa3.38□□□□□ -1.87
VPS33YLR396C HUA2Q12134 243 aa3.38□□□□□ -1.87
VPS33YLR396C APC1P53886 1748 aa3.38□□□□□ -1.87
VPS33YLR396C CLN1P20437 546 aa3.37□□□□□ -1.87
VPS33YLR396C VMA16P23968 213 aa3.37□□□□□ -1.87
VPS33YLR396C PAP1P29468 568 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C MGM1P32266 881 aa3.37□□□□□ -1.87
VPS33YLR396C MIA40P36046 403 aa3.37□□□□□ -1.87
VPS33YLR396C SCO2P38072 301 aa3.37□□□□□ -1.87
VPS33YLR396C AGP2P38090 596 aa3.37□□□□□ -1.87
VPS33YLR396C RFT1P38206 574 aaPredicted RBP3.37□□□□□ -1.87
VPS33YLR396C ELO1P39540 310 aa3.37□□□□□ -1.87
VPS33YLR396C DIA3P52290 468 aa3.37□□□□□ -1.87
VPS33YLR396C ORM1P53224 222 aa3.37□□□□□ -1.87
VPS33YLR396C ZPR1P53303 486 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C POS5Q06892 414 aa3.37□□□□□ -1.87
VPS33YLR396C GSH2Q08220 491 aa3.37□□□□□ -1.87
VPS33YLR396C YLR112WQ12130 139 aa3.37□□□□□ -1.87
VPS33YLR396C PGA3Q12746 312 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C HSC82P15108 705 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C OLE1P21147 510 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C CDC10P25342 322 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C ADH7P25377 361 aa3.37□□□□□ -1.87
VPS33YLR396C PGS1P25578 521 aa3.37□□□□□ -1.87
VPS33YLR396C RPL5P26321 297 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C BRF1P29056 596 aa3.37□□□□□ -1.87
VPS33YLR396C BUD2P33314 1104 aa3.37□□□□□ -1.87
VPS33YLR396C SRL3P36167 246 aa3.37□□□□□ -1.87
VPS33YLR396C NOP4P37838 685 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C FZO1P38297 855 aa3.37□□□□□ -1.87
VPS33YLR396C GND1P38720 489 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C LIN1P38852 340 aaPredicted RBP3.37□□□□□ -1.87
VPS33YLR396C TDA11P38854 504 aa3.37□□□□□ -1.87
VPS33YLR396C FLC2P39719 783 aa3.37□□□□□ -1.87
VPS33YLR396C EFM4P40516 257 aa3.37□□□□□ -1.87
VPS33YLR396C INA22P40576 216 aa3.37□□□□□ -1.87
VPS33YLR396C GCN20P43535 752 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C SGM1P47166 707 aa3.37□□□□□ -1.87
VPS33YLR396C SCW4P53334 386 aaKnown RBP3.37□□□□□ -1.87
VPS33YLR396C RGT2Q12300 763 aa3.37□□□□□ -1.87
VPS33YLR396C CDC8P00572 216 aa3.36□□□□□ -1.87
VPS33YLR396C ARG4P04076 463 aaPredicted RBP3.36□□□□□ -1.87
VPS33YLR396C LPD1P09624 499 aaKnown RBP3.36□□□□□ -1.87
VPS33YLR396C MET8P15807 274 aa3.36□□□□□ -1.87
VPS33YLR396C TYR1P20049 452 aa3.36□□□□□ -1.87
VPS33YLR396C LCB1P25045 558 aaKnown RBP3.36□□□□□ -1.87
VPS33YLR396C SGF29P25554 259 aa3.36□□□□□ -1.87
VPS33YLR396C POL4P25615 582 aa3.36□□□□□ -1.87
VPS33YLR396C TSC10P38342 320 aa3.36□□□□□ -1.87
VPS33YLR396C GVP36P40531 326 aaKnown RBP3.36□□□□□ -1.87
VPS33YLR396C GAT1P43574 510 aa3.36□□□□□ -1.87
VPS33YLR396C TMA22P47089 198 aaPredicted RBP3.36□□□□□ -1.87
VPS33YLR396C SHE10P53075 577 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms