RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C GTO1P48239 356 aa2.01□□□□□ -2.09
RTT101YJL047C RIB4P50861 169 aaPredicted RBP2.01□□□□□ -2.09
RTT101YJL047C COQ6P53318 479 aa2.01□□□□□ -2.09
RTT101YJL047C COP1P53622 1201 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C DBP6P53734 629 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C EKI1Q03764 534 aa2.01□□□□□ -2.09
RTT101YJL047C FIN1Q03898 291 aa2.01□□□□□ -2.09
RTT101YJL047C ATC1Q04005 294 aa2.01□□□□□ -2.09
RTT101YJL047C RRP45Q05636 305 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C ATG9Q12142 997 aa2.01□□□□□ -2.09
RTT101YJL047C SWM1Q12379 170 aa2.01□□□□□ -2.09
RTT101YJL047C YBR255C-AQ3E776 120 aa2.01□□□□□ -2.09
RTT101YJL047C COX1P00401 534 aa2□□□□□ -2.09
RTT101YJL047C GAL10P04397 699 aa2□□□□□ -2.09
RTT101YJL047C AAC1P04710 309 aa2□□□□□ -2.09
RTT101YJL047C ARG81P05085 880 aa2□□□□□ -2.09
RTT101YJL047C LEU4P06208 619 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C SSA3P09435 649 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C PCT1P13259 424 aa2□□□□□ -2.09
RTT101YJL047C SRV2P17555 526 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C SRP54P20424 541 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C MEK1P24719 497 aaPredicted RBP2□□□□□ -2.09
RTT101YJL047C PET18P25362 215 aa2□□□□□ -2.09
RTT101YJL047C PUP3P25451 205 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C MCM4P30665 933 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C ARO4P32449 370 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C EFB1P32471 206 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C YBR144CP34215 104 aa2□□□□□ -2.09
RTT101YJL047C PCA1P38360 1216 aa2□□□□□ -2.09
RTT101YJL047C ERG7P38604 731 aa2□□□□□ -2.09
RTT101YJL047C SIP3P38717 1229 aa2□□□□□ -2.09
RTT101YJL047C PIH1P38768 344 aa2□□□□□ -2.09
RTT101YJL047C YHR045WP38775 560 aa2□□□□□ -2.09
RTT101YJL047C PTC7P38797 343 aa2□□□□□ -2.09
RTT101YJL047C FMO1P38866 432 aa2□□□□□ -2.09
RTT101YJL047C SHQ1P40486 507 aaPredicted RBP2□□□□□ -2.09
RTT101YJL047C OYE3P41816 400 aaPredicted RBP2□□□□□ -2.09
RTT101YJL047C JJJ3P47138 172 aa2□□□□□ -2.09
RTT101YJL047C TRF5P48561 642 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C MRK1P50873 501 aa2□□□□□ -2.09
RTT101YJL047C DIA3P52290 468 aa2□□□□□ -2.09
RTT101YJL047C KTR6P54070 446 aa2□□□□□ -2.09
RTT101YJL047C PET117Q02771 107 aa2□□□□□ -2.09
RTT101YJL047C STD1Q02794 444 aa2□□□□□ -2.09
RTT101YJL047C NRG1Q03125 231 aa2□□□□□ -2.09
RTT101YJL047C MRPS17Q03246 237 aaPredicted RBP2□□□□□ -2.09
RTT101YJL047C RSM24Q03976 319 aa2□□□□□ -2.09
RTT101YJL047C YLR346CQ06139 101 aa2□□□□□ -2.09
RTT101YJL047C BCP1Q06338 283 aa2□□□□□ -2.09
RTT101YJL047C MRI1Q06489 411 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C ATG23Q06671 453 aa2□□□□□ -2.09
RTT101YJL047C VAC14Q06708 880 aa2□□□□□ -2.09
RTT101YJL047C TPO1Q07824 586 aa2□□□□□ -2.09
RTT101YJL047C DIS3Q08162 1001 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C GEP3Q08622 556 aa2□□□□□ -2.09
RTT101YJL047C VAM3Q12241 283 aa2□□□□□ -2.09
RTT101YJL047C AI5_ALPHAQ9ZZX1 630 aa2□□□□□ -2.09
RTT101YJL047C AI1P03875 834 aa2□□□□□ -2.09
RTT101YJL047C SAM1P10659 382 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C APA2P22108 325 aa2□□□□□ -2.09
RTT101YJL047C RPI1P23250 407 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C ADY2P25613 283 aa2□□□□□ -2.09
RTT101YJL047C IMG1P25626 169 aa2□□□□□ -2.09
RTT101YJL047C BEM1P29366 551 aa2□□□□□ -2.09
RTT101YJL047C HIR2P32480 875 aa2□□□□□ -2.09
RTT101YJL047C YKR015CP36111 568 aa2□□□□□ -2.09
RTT101YJL047C ECM4P36156 370 aa2□□□□□ -2.09
RTT101YJL047C ASC1P38011 319 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C SWC5P38326 303 aa2□□□□□ -2.09
RTT101YJL047C SDH8P38345 138 aa2□□□□□ -2.09
RTT101YJL047C RPP1P38786 293 aa2□□□□□ -2.09
RTT101YJL047C END3P39013 349 aa2□□□□□ -2.09
RTT101YJL047C NPA3P47122 385 aa2□□□□□ -2.09
RTT101YJL047C MSE1P48525 536 aa2□□□□□ -2.09
RTT101YJL047C VPS73P53142 486 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C YGR117CP53270 476 aa2□□□□□ -2.09
RTT101YJL047C YGR126WP53274 230 aa2□□□□□ -2.09
RTT101YJL047C SPC98P53540 846 aa2□□□□□ -2.09
RTT101YJL047C MSC1Q03104 513 aa2□□□□□ -2.09
RTT101YJL047C RRB1Q04225 511 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C ERV41Q04651 352 aa2□□□□□ -2.09
RTT101YJL047C ARG7Q04728 441 aa2□□□□□ -2.09
RTT101YJL047C TSR1Q07381 788 aaKnown RBP2□□□□□ -2.09
RTT101YJL047C YER175W-AQ8TGU4 54 aa2□□□□□ -2.09
RTT101YJL047C MTR10Q99189 972 aa2□□□□□ -2.09
RTT101YJL047C Q0010Q9ZZX9 128 aa2□□□□□ -2.09
RTT101YJL047C JIP3O13555 125 aa1.99□□□□□ -2.09
RTT101YJL047C GPA1P08539 472 aa1.99□□□□□ -2.09
RTT101YJL047C RPL31BP0C2H9 113 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C MSS116P15424 664 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C ART10P18634 518 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C PDE1P22434 369 aa1.99□□□□□ -2.09
RTT101YJL047C AMD2P22580 549 aa1.99□□□□□ -2.09
RTT101YJL047C GSH1P32477 678 aa1.99□□□□□ -2.09
RTT101YJL047C SIP1P32578 815 aa1.99□□□□□ -2.09
RTT101YJL047C IMP3P32899 183 aaPredicted RBP1.99□□□□□ -2.09
RTT101YJL047C BMH2P34730 273 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C SLX1P38324 304 aa1.99□□□□□ -2.09
RTT101YJL047C TAE1P38340 232 aa1.99□□□□□ -2.09
RTT101YJL047C SAF1P38352 637 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms