RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	YOL075C	Q08234	1294 aa		4.86	□□□□□ -1.63
APL6	YGR261C	YOR059C	Q08448	450 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	BUD7	Q08754	746 aa		4.86	□□□□□ -1.63
APL6	YGR261C	SPE4	Q12455	300 aa		4.86	□□□□□ -1.63
APL6	YGR261C	FMP16	Q12497	93 aa		4.86	□□□□□ -1.63
APL6	YGR261C	RPL24A	P04449	155 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	CHS1	P08004	1131 aa		4.85	□□□□□ -1.63
APL6	YGR261C	TUB3	P09734	445 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	MATALPHA2	P0CY08	210 aa		4.85	□□□□□ -1.63
APL6	YGR261C	HMLALPHA2	P0CY09	210 aa		4.85	□□□□□ -1.63
APL6	YGR261C	FBA1	P14540	359 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	MET16	P18408	261 aa	Predicted RBP	4.85	□□□□□ -1.63
APL6	YGR261C	DBF2	P22204	572 aa		4.85	□□□□□ -1.63
APL6	YGR261C	PYC2	P32327	1180 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	DOA1	P36037	715 aa		4.85	□□□□□ -1.63
APL6	YGR261C	REG2	P38232	338 aa		4.85	□□□□□ -1.63
APL6	YGR261C	SAK1	P38990	1142 aa		4.85	□□□□□ -1.63
APL6	YGR261C	SOK1	P40317	901 aa		4.85	□□□□□ -1.63
APL6	YGR261C	ELO3	P40319	345 aa		4.85	□□□□□ -1.63
APL6	YGR261C	DOT5	P40553	215 aa		4.85	□□□□□ -1.63
APL6	YGR261C	JJJ2	P46997	583 aa		4.85	□□□□□ -1.63
APL6	YGR261C	AAD10	P47182	288 aa		4.85	□□□□□ -1.63
APL6	YGR261C	YNR071C	P53757	342 aa		4.85	□□□□□ -1.63
APL6	YGR261C	PRM15	Q03262	622 aa		4.85	□□□□□ -1.63
APL6	YGR261C	YDR514C	Q04408	483 aa		4.85	□□□□□ -1.63
APL6	YGR261C	MYO5	Q04439	1219 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	CDC123	Q05791	360 aa		4.85	□□□□□ -1.63
APL6	YGR261C	RRG8	Q06109	277 aa		4.85	□□□□□ -1.63
APL6	YGR261C	EMG1	Q06287	252 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	GPB1	Q08886	897 aa		4.85	□□□□□ -1.63
APL6	YGR261C	YJR112W-A	Q3E743	109 aa		4.85	□□□□□ -1.63
APL6	YGR261C	YLR278C	Q05854	1341 aa		4.85	□□□□□ -1.63
APL6	YGR261C	ILV5	P06168	395 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	RAD1	P06777	1100 aa		4.85	□□□□□ -1.63
APL6	YGR261C	GAL3	P13045	520 aa		4.85	□□□□□ -1.63
APL6	YGR261C	CTR86	P25355	563 aa		4.85	□□□□□ -1.63
APL6	YGR261C	SPR1	P32603	445 aa		4.85	□□□□□ -1.63
APL6	YGR261C	YPT7	P32939	208 aa		4.85	□□□□□ -1.63
APL6	YGR261C	SSH1	P38353	490 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	NEM1	P38757	446 aa		4.85	□□□□□ -1.63
APL6	YGR261C	FSH1	P38777	243 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
APL6	YGR261C	AGP3	P43548	558 aa		4.85	□□□□□ -1.63
APL6	YGR261C	COG1	P53079	417 aa		4.85	□□□□□ -1.63
APL6	YGR261C	BOP3	P53958	396 aa		4.85	□□□□□ -1.63
APL6	YGR261C	YML108W	Q03759	105 aa		4.85	□□□□□ -1.63
APL6	YGR261C	YMR226C	Q05016	267 aa	Known RBP	4.85	□□□□□ -1.63
APL6	YGR261C	CDC33	P07260	213 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	REV1	P12689	985 aa		4.84	□□□□□ -1.63
APL6	YGR261C	SAG1	P20840	650 aa		4.84	□□□□□ -1.63
APL6	YGR261C	PAT1	P25644	796 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	PRO3	P32263	286 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	ARP2	P32381	391 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	LNP1	P38878	278 aa		4.84	□□□□□ -1.63
APL6	YGR261C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
APL6	YGR261C	CCT6	P39079	546 aa		4.84	□□□□□ -1.63
APL6	YGR261C	YMR147W	P40218	223 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	RTS2	P40962	232 aa		4.84	□□□□□ -1.63
APL6	YGR261C	YJL132W	P47014	750 aa		4.84	□□□□□ -1.63
APL6	YGR261C	YJL045W	P47052	634 aa		4.84	□□□□□ -1.63
APL6	YGR261C	YJR154W	P47181	346 aa		4.84	□□□□□ -1.63
APL6	YGR261C	OKP1	P53298	406 aa		4.84	□□□□□ -1.63
APL6	YGR261C	RPT4	P53549	437 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	COP1	P53622	1201 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	MRPL50	P53724	139 aa		4.84	□□□□□ -1.63
APL6	YGR261C	SQS1	P53866	767 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	ORC3	P54790	616 aa		4.84	□□□□□ -1.63
APL6	YGR261C	MMT1	Q03218	510 aa		4.84	□□□□□ -1.63
APL6	YGR261C	RIM13	Q03792	727 aa		4.84	□□□□□ -1.63
APL6	YGR261C	UBX2	Q04228	584 aa		4.84	□□□□□ -1.63
APL6	YGR261C	YMR114C	Q04471	368 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	APC4	Q04601	652 aa		4.84	□□□□□ -1.63
APL6	YGR261C	AAD4	Q07747	329 aa		4.84	□□□□□ -1.63
APL6	YGR261C	CSM4	Q08955	156 aa		4.84	□□□□□ -1.63
APL6	YGR261C	MDM20	Q12387	796 aa	Known RBP	4.84	□□□□□ -1.63
APL6	YGR261C	YPT6	Q99260	215 aa		4.84	□□□□□ -1.63
APL6	YGR261C	PMA1	P05030	918 aa	Known RBP	4.84	□□□□□ -1.64
APL6	YGR261C	HIP1	P06775	603 aa		4.84	□□□□□ -1.64
APL6	YGR261C	RPL27A	P0C2H6	136 aa	Known RBP	4.84	□□□□□ -1.64
APL6	YGR261C	RPL27B	P0C2H7	136 aa	Known RBP	4.84	□□□□□ -1.64
APL6	YGR261C	NHP6B	P11633	99 aa	Known RBP	4.84	□□□□□ -1.64
APL6	YGR261C	PEP5	P12868	1029 aa		4.84	□□□□□ -1.64
APL6	YGR261C	DBR1	P24309	405 aa	Known RBP	4.84	□□□□□ -1.64
APL6	YGR261C	IDH2	P28241	369 aa	Known RBP	4.84	□□□□□ -1.64
APL6	YGR261C	GCD11	P32481	527 aa	Known RBP	4.84	□□□□□ -1.64
APL6	YGR261C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
APL6	YGR261C	SPS19	P32573	292 aa	Known RBP	4.84	□□□□□ -1.64
APL6	YGR261C	UTR2	P32623	467 aa		4.84	□□□□□ -1.64
APL6	YGR261C	TYE7	P33122	291 aa	Predicted RBP	4.84	□□□□□ -1.64
APL6	YGR261C	YOX1	P34161	385 aa		4.84	□□□□□ -1.64
APL6	YGR261C	TUL1	P36096	758 aa		4.84	□□□□□ -1.64
APL6	YGR261C	YKR051W	P36142	418 aa		4.84	□□□□□ -1.64
APL6	YGR261C	AGP2	P38090	596 aa		4.84	□□□□□ -1.64
APL6	YGR261C	VAB2	P40003	282 aa		4.84	□□□□□ -1.64
APL6	YGR261C	MSB3	P48566	633 aa	Predicted RBP	4.84	□□□□□ -1.64
APL6	YGR261C	PEF1	P53238	335 aa		4.84	□□□□□ -1.64
APL6	YGR261C	YDR248C	Q03786	193 aa		4.84	□□□□□ -1.64
APL6	YGR261C	TRI1	Q05024	226 aa		4.84	□□□□□ -1.64
APL6	YGR261C	EST2	Q06163	884 aa		4.84	□□□□□ -1.64
APL6	YGR261C	ECM30	Q06673	1274 aa		4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms