RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	YOR131C	Q12486	218 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	MHF2	Q3E829	80 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	ARG81	P05085	880 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	MIH1	P23748	554 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	NUP2	P32499	720 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	RPN2	P32565	945 aa	Known RBP	4.81	□□□□□ -1.64
ROT2	YBR229C	NUF2	P33895	451 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	YLF2	P38746	405 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	SOP4	P39543	234 aa	Predicted RBP	4.81	□□□□□ -1.64
ROT2	YBR229C	SIT1	P39980	628 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	YER034W	P40022	185 aa	Known RBP	4.81	□□□□□ -1.64
ROT2	YBR229C	GCN5	Q03330	439 aa		4.81	□□□□□ -1.64
ROT2	YBR229C	RRP17	Q04031	235 aa	Predicted RBP	4.81	□□□□□ -1.64
ROT2	YBR229C	WTM1	Q12363	437 aa	Known RBP	4.81	□□□□□ -1.64
ROT2	YBR229C	LPX1	Q12405	387 aa	Known RBP	4.81	□□□□□ -1.64
ROT2	YBR229C	MF(ALPHA)1	P01149	165 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	MET17	P06106	444 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	HEM1	P09950	548 aa	Predicted RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	SCH9	P11792	824 aa	Known RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	TEC1	P18412	486 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	YAP1	P19880	650 aa	Known RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	MRPL8	P22353	238 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	PPZ1	P26570	692 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	TES1	P41903	349 aa	Known RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	FAR7	P43592	221 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	TIS11	P47977	285 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	ATP22	P50273	684 aa	Predicted RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	ORM1	P53224	222 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	HXT15	P54854	567 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	SPP1	Q03012	353 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	PUS7	Q08647	676 aa	Known RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	SOG2	Q08817	791 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	RPN6	Q12377	434 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	TRM10	Q12400	293 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	YPL119C-A	Q3E751	87 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	SPS1	P08458	490 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	DAP2	P18962	818 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	NTG1	P31378	399 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	CDC5	P32562	705 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	GDH2	P33327	1092 aa	Known RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	BIR1	P47134	954 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	GPI8	P49018	411 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	PSP1	P50896	841 aa	Known RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	YPT32	P51996	222 aa	Known RBP	4.8	□□□□□ -1.64
ROT2	YBR229C	MON1	P53129	644 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	IRC15	Q02733	499 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	YPL107W	Q02873	248 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	SPO71	Q03868	1245 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	ARP10	Q04549	284 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	RCN2	Q12044	265 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	MLH3	Q12083	715 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	MCD1	Q12158	566 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	MHF1	Q3E835	90 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	MDM12	Q92328	271 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	FRT1	Q99332	602 aa		4.8	□□□□□ -1.64
ROT2	YBR229C	CAD1	P24813	409 aa	Known RBP	4.79	□□□□□ -1.64
ROT2	YBR229C	RBK1	P25332	333 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	AAR2	P32357	355 aa	Predicted RBP	4.79	□□□□□ -1.64
ROT2	YBR229C	RCN1	P36054	211 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	MRPL40	P36534	297 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	IME4	P41833	600 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	SIP4	P46954	829 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	BFA1	P47113	574 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	ESF2	P53743	316 aa	Known RBP	4.79	□□□□□ -1.64
ROT2	YBR229C	CAF120	P53836	1060 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	IDP3	P53982	420 aa	Known RBP	4.79	□□□□□ -1.64
ROT2	YBR229C	RPN4	Q03465	531 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	HER2	Q03557	464 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	VTA1	Q06263	330 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	THP1	Q08231	455 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	GCN3	P14741	305 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
ROT2	YBR229C	ALY1	P36117	915 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	ETP1	P38748	585 aa	Known RBP	4.79	□□□□□ -1.64
ROT2	YBR229C	IPT1	P38954	527 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	YAR028W	P39548	234 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	FMP30	Q02883	468 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	URC2	Q04411	772 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	YML083C	Q04526	418 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	APC4	Q04601	652 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	BCH1	Q05029	724 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	YLL007C	Q07799	665 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	IRC10	Q08118	586 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	TY4B-P	A0A0B7P3V8	1104 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	RAS2	P01120	322 aa	Known RBP	4.79	□□□□□ -1.64
ROT2	YBR229C	ADK2	P26364	225 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	PHO11	P35842	467 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	PHO12	P38693	467 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	EMP65	P40085	556 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	UFE1	P41834	346 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	SPO74	P45819	413 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	TWF1	P53250	332 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	DAM1	P53267	343 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	YNL143C	P53908	130 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	COG5	P53951	403 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	PEX13	P80667	386 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	CIK1	Q01649	594 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	RSC9	Q03124	581 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	EMI1	Q04406	187 aa		4.79	□□□□□ -1.64
ROT2	YBR229C	YDR056C	Q12025	205 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 98.6 ms