RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C ERG27Q12452 347 aaKnown RBP5.58□□□□□ -1.52
PDB1YBR221C YPT6Q99260 215 aa5.58□□□□□ -1.52
PDB1YBR221C URA3P03962 267 aa5.57□□□□□ -1.52
PDB1YBR221C ILV5P06168 395 aaKnown RBP5.57□□□□□ -1.52
PDB1YBR221C YAK1P14680 807 aa5.57□□□□□ -1.52
PDB1YBR221C RFA1P22336 621 aaKnown RBP5.57□□□□□ -1.52
PDB1YBR221C RVS161P25343 265 aaKnown RBP5.57□□□□□ -1.52
PDB1YBR221C YCL068CP25593 260 aa5.57□□□□□ -1.52
PDB1YBR221C YME2P32843 850 aa5.57□□□□□ -1.52
PDB1YBR221C CYM1P32898 989 aa5.57□□□□□ -1.52
PDB1YBR221C SLA2P33338 968 aa5.57□□□□□ -1.52
PDB1YBR221C PMT1P33775 817 aa5.57□□□□□ -1.52
PDB1YBR221C AUR1P36107 401 aaPredicted RBP5.57□□□□□ -1.52
PDB1YBR221C MAL33P38157 468 aa5.57□□□□□ -1.52
PDB1YBR221C MAL32P38158 584 aa5.57□□□□□ -1.52
PDB1YBR221C KAP104P38217 918 aaKnown RBP5.57□□□□□ -1.52
PDB1YBR221C RTC3P38804 111 aaPredicted RBP5.57□□□□□ -1.52
PDB1YBR221C EGD2P38879 174 aaKnown RBP5.57□□□□□ -1.52
PDB1YBR221C TWF1P53250 332 aa5.57□□□□□ -1.52
PDB1YBR221C CAF130P53280 1122 aaPredicted RBP5.57□□□□□ -1.52
PDB1YBR221C MAL12P53341 584 aa5.57□□□□□ -1.52
PDB1YBR221C YNL146WP53906 100 aa5.57□□□□□ -1.52
PDB1YBR221C ARP4P80428 489 aa5.57□□□□□ -1.52
PDB1YBR221C BET4Q00618 327 aa5.57□□□□□ -1.52
PDB1YBR221C ERV41Q04651 352 aa5.57□□□□□ -1.52
PDB1YBR221C PDR8Q06149 701 aa5.57□□□□□ -1.52
PDB1YBR221C GPN3Q06543 272 aa5.57□□□□□ -1.52
PDB1YBR221C BUD7Q08754 746 aa5.57□□□□□ -1.52
PDB1YBR221C TGS1Q12052 315 aa5.57□□□□□ -1.52
PDB1YBR221C ATP2P00830 511 aaKnown RBP5.56□□□□□ -1.52
PDB1YBR221C ARG4P04076 463 aaPredicted RBP5.56□□□□□ -1.52
PDB1YBR221C RPL24AP04449 155 aaKnown RBP5.56□□□□□ -1.52
PDB1YBR221C SEC63P14906 663 aa5.56□□□□□ -1.52
PDB1YBR221C PRE10P21242 288 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
PDB1YBR221C SNT1P25357 1226 aa5.56□□□□□ -1.52
PDB1YBR221C ADY2P25613 283 aa5.56□□□□□ -1.52
PDB1YBR221C ZIP1P31111 875 aa5.56□□□□□ -1.52
PDB1YBR221C HCS1P34243 683 aa5.56□□□□□ -1.52
PDB1YBR221C PTK1P36002 662 aaPredicted RBP5.56□□□□□ -1.52
PDB1YBR221C THI2P38141 450 aa5.56□□□□□ -1.52
PDB1YBR221C SFB3P38810 929 aa5.56□□□□□ -1.52
PDB1YBR221C MLH1P38920 769 aa5.56□□□□□ -1.52
PDB1YBR221C SSN3P39073 555 aa5.56□□□□□ -1.52
PDB1YBR221C ALG5P40350 334 aa5.56□□□□□ -1.52
PDB1YBR221C GLG2P47011 380 aa5.56□□□□□ -1.52
PDB1YBR221C MPS3P47069 682 aa5.56□□□□□ -1.52
PDB1YBR221C ECM27P47144 725 aa5.56□□□□□ -1.52
PDB1YBR221C EXG2P52911 562 aa5.56□□□□□ -1.52
PDB1YBR221C YGL114WP53134 725 aa5.56□□□□□ -1.52
PDB1YBR221C YGR012WP53206 393 aa5.56□□□□□ -1.52
PDB1YBR221C PEF1P53238 335 aa5.56□□□□□ -1.52
PDB1YBR221C YGR126WP53274 230 aa5.56□□□□□ -1.52
PDB1YBR221C RTT102P53330 157 aa5.56□□□□□ -1.52
PDB1YBR221C INN1P53901 409 aa5.56□□□□□ -1.52
PDB1YBR221C MUS81Q04149 632 aaPredicted RBP5.56□□□□□ -1.52
PDB1YBR221C ARG7Q04728 441 aa5.56□□□□□ -1.52
PDB1YBR221C RBS1Q05672 457 aaKnown RBP5.56□□□□□ -1.52
PDB1YBR221C AEP3Q12089 606 aa5.56□□□□□ -1.52
PDB1YBR221C SPE4Q12455 300 aa5.56□□□□□ -1.52
PDB1YBR221C PET122P10355 254 aa5.55□□□□□ -1.52
PDB1YBR221C RPL3P14126 387 aaKnown RBP5.55□□□□□ -1.52
PDB1YBR221C DPB2P24482 689 aaPredicted RBP5.55□□□□□ -1.52
PDB1YBR221C YCR061WP25639 631 aa5.55□□□□□ -1.52
PDB1YBR221C BEM1P29366 551 aa5.55□□□□□ -1.52
PDB1YBR221C PRO3P32263 286 aaKnown RBP5.55□□□□□ -1.52
PDB1YBR221C VPS51P36116 164 aa5.55□□□□□ -1.52
PDB1YBR221C POA1P38218 177 aa5.55□□□□□ -1.52
PDB1YBR221C AKR1P39010 764 aa5.55□□□□□ -1.52
PDB1YBR221C END3P39013 349 aa5.55□□□□□ -1.52
PDB1YBR221C NUP60P39705 539 aa5.55□□□□□ -1.52
PDB1YBR221C PZF1P39933 429 aa5.55□□□□□ -1.52
PDB1YBR221C YIR042CP40586 236 aa5.55□□□□□ -1.52
PDB1YBR221C HXT14P42833 540 aa5.55□□□□□ -1.52
PDB1YBR221C SNZ3P43545 298 aa5.55□□□□□ -1.52
PDB1YBR221C ZAP1P47043 880 aa5.55□□□□□ -1.52
PDB1YBR221C BRO1P48582 844 aa5.55□□□□□ -1.52
PDB1YBR221C DRN1P53255 507 aaKnown RBP5.55□□□□□ -1.52
PDB1YBR221C COP1P53622 1201 aaKnown RBP5.55□□□□□ -1.52
PDB1YBR221C YNR014WP53719 212 aa5.55□□□□□ -1.52
PDB1YBR221C SNZ2P53824 298 aa5.55□□□□□ -1.52
PDB1YBR221C SAM50P53969 484 aa5.55□□□□□ -1.52
PDB1YBR221C SLT2Q00772 484 aa5.55□□□□□ -1.52
PDB1YBR221C UTP6Q02354 440 aaKnown RBP5.55□□□□□ -1.52
PDB1YBR221C YML037CQ03703 340 aa5.55□□□□□ -1.52
PDB1YBR221C YPS7Q06325 596 aa5.55□□□□□ -1.52
PDB1YBR221C CMS1Q07897 291 aaKnown RBP5.55□□□□□ -1.52
PDB1YBR221C XYL2Q07993 356 aa5.55□□□□□ -1.52
PDB1YBR221C HRK1Q08732 759 aaKnown RBP5.55□□□□□ -1.52
PDB1YBR221C VCX1Q99385 411 aa5.55□□□□□ -1.52
PDB1YBR221C PRC1P00729 532 aa5.54□□□□□ -1.52
PDB1YBR221C UTR1P21373 530 aa5.54□□□□□ -1.52
PDB1YBR221C MRPL8P22353 238 aa5.54□□□□□ -1.52
PDB1YBR221C RAD14P28519 371 aa5.54□□□□□ -1.52
PDB1YBR221C BMH1P29311 267 aaKnown RBP5.54□□□□□ -1.52
PDB1YBR221C YME1P32795 747 aa5.54□□□□□ -1.52
PDB1YBR221C MRT4P33201 236 aaKnown RBP5.54□□□□□ -1.52
PDB1YBR221C MRPL10P36520 322 aa5.54□□□□□ -1.52
PDB1YBR221C YHR033WP38690 423 aa5.54□□□□□ -1.52
PDB1YBR221C RCY1P39531 840 aa5.54□□□□□ -1.52
PDB1YBR221C YAR028WP39548 234 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms