RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ASB11Q8WXH4 323 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 MMP19Q99542 508 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 GPR27Q9NS67 375 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 VAV3Q9UKW4 847 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 AQP7O14520 342 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 FURINP09958 794 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 PAMP19021 973 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 IBSPP21815 317 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-210ENST00000553455 GPR85P60893 370 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 RCBTB1Q8NDN9 531 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 CHAC2Q8WUX2 184 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 DIO2Q92813 273 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 ZFYVE21Q9BQ24 234 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 MAPRE3Q9UPY8 281 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 PCDHA9Q9Y5H5 950 aa7.35□□□□□ -1.23
SYNE2-210ENST00000553455 NPHP3-ACAD11A0A0J9YXS1 232 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 IGHA1P01876 353 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 ASLP04424 464 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 POU3F2P20265 443 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-210ENST00000553455 ENDOUP21128 410 aaKnown RBP7.34□□□□□ -1.23
SYNE2-210ENST00000553455 ITGB7P26010 798 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 RPL10P27635 214 aaKnown RBP7.34□□□□□ -1.23
SYNE2-210ENST00000553455 IGBP1P78318 339 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 CNNM4Q6P4Q7 775 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 WAPLQ7Z5K2 1190 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 DDX1Q92499 740 aaKnown RBP7.34□□□□□ -1.23
SYNE2-210ENST00000553455 MISP3Q96FF7 219 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 FCRL2Q96LA5 508 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-210ENST00000553455 G6PC3Q9BUM1 346 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 CAAP1Q9H8G2 361 aa7.34□□□□□ -1.23
SYNE2-210ENST00000553455 KCNA6P17658 529 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 IGFALSP35858 605 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 BNIP3Q12983 259 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 IQCEQ6IPM2 695 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 ABHD17CQ6PCB6 329 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 CYP2R1Q6VVX0 501 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 LBX2Q6XYB7 198 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 CPNE8Q86YQ8 564 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 IFNL3Q8IZI9 196 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 UBR7Q8N806 425 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.33□□□□□ -1.24
SYNE2-210ENST00000553455 BCL7CQ8WUZ0 217 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-210ENST00000553455 MAGEB10Q96LZ2 347 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-210ENST00000553455 SEMA6BQ9H3T3 888 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 EBF1Q9UH73 591 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 FBXL7Q9UJT9 491 aa7.33□□□□□ -1.24
SYNE2-210ENST00000553455 TRBV23OR9-2A0A075B6M9 112 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 ARVCFO00192 962 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 OPA1O60313 960 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 SOX5P35711 763 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 GUCY1A3Q02108 690 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 IKZF1Q13422 519 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 LAPTM5Q13571 262 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 NAT16Q8N8M0 369 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 MTFR1LQ9H019 292 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 CARS2Q9HA77 564 aaKnown RBP7.32□□□□□ -1.24
SYNE2-210ENST00000553455 BSDC1Q9NW68 430 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-210ENST00000553455 PCDHA8Q9Y5H6 950 aa7.32□□□□□ -1.24
SYNE2-210ENST00000553455 MED26O95402 600 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 PRNPP04156 253 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 CNGA1P29973 690 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 ANAPC15P60006 121 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 PCBP1Q15365 356 aaKnown RBP eCLIP7.31□□□□□ -1.24
SYNE2-210ENST00000553455 SEPT7Q16181 437 aaKnown RBP7.31□□□□□ -1.24
SYNE2-210ENST00000553455 PKN3Q6P5Z2 889 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 NFXL1Q6ZNB6 911 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 SPRED2Q7Z698 418 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 MTDHQ86UE4 582 aaKnown RBP7.31□□□□□ -1.24
SYNE2-210ENST00000553455 JAMLQ86YT9 394 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 PPM1KQ8N3J5 372 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 AFAP1L2Q8N4X5 818 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 MAP6Q96JE9 813 aa7.31□□□□□ -1.24
SYNE2-210ENST00000553455 C7orf72A4D263 438 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 TBC1D8O95759 1140 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 JMJD7P0C870 316 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 CD8BP10966 210 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 GRIK1P39086 918 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 CDKN1CP49918 316 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-210ENST00000553455 ZCCHC8Q6NZY4 707 aaKnown RBP7.3□□□□□ -1.24
SYNE2-210ENST00000553455 INTS5Q6P9B9 1019 aaKnown RBP7.3□□□□□ -1.24
SYNE2-210ENST00000553455 ZNF574Q6ZN55 896 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-210ENST00000553455 STK11IPQ8N1F8 1099 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 PCDH19Q8TAB3 1148 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 LINC01599Q8WXQ3 324 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 HHIPL1Q96JK4 782 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 LMCD1Q9NZU5 365 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 PPARGC1AQ9UBK2 798 aaKnown RBP7.3□□□□□ -1.24
SYNE2-210ENST00000553455 PCDHA2Q9Y5H9 948 aa7.3□□□□□ -1.24
SYNE2-210ENST00000553455 FADS2P1A8MWK0 482 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 KPNA6O60684 536 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 COBLO75128 1261 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 CKMP06732 381 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 ZGLP1P0C6A0 271 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 NAT1P18440 290 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 SPINK2P20155 84 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 KIZQ2M2Z5 673 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 STRA8Q7Z7C7 330 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 SLCO6A1Q86UG4 719 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 NLRP10Q86W26 655 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms