RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 TERTO14746 1132 aaKnown RBP5.95□□□□□ -1.46
SDCBP-207ENST00000520168 WDR46O15213 610 aaKnown RBP5.95□□□□□ -1.46
SDCBP-207ENST00000520168 FLOT1O75955 427 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 DXOO77932 396 aaKnown RBP5.95□□□□□ -1.46
SDCBP-207ENST00000520168 CD4P01730 458 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 ASGR1P07306 291 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 C6orf222P0C671 652 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-207ENST00000520168 ACTN1P12814 892 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 SNRPBP14678 240 aaKnown RBP5.95□□□□□ -1.46
SDCBP-207ENST00000520168 CD46P15529 392 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 GJA9P57773 515 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 TIMM10P62072 90 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 SCN5AQ14524 2016 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 SHROOM1Q2M3G4 852 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-207ENST00000520168 ZNF792Q3KQV3 632 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 MAMDC4Q6UXC1 1216 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 OTOP2Q7RTS6 562 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 RIOX2Q8IUF8 465 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 GJD3Q8N144 294 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 PHOSPHO2Q8TCD6 241 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 VTI1AQ96AJ9 217 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 MFSD14AQ96MC6 490 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 FBXL18Q96ME1 805 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 PPP1R12CQ9BZL4 782 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 UPF3AQ9H1J1 476 aaKnown RBP5.95□□□□□ -1.46
SDCBP-207ENST00000520168 BRWD1Q9NSI6 2320 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 FAM50BQ9Y247 325 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 VPS13AQ96RL7 3174 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 ZBBXA8MT70 800 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 DCXO43602 365 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 ZEB2O60315 1214 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 KDM4AO75164 1064 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 CA3P07451 260 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 SSTR3P32745 418 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-207ENST00000520168 CYP2C18P33260 490 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 RFC2P35250 354 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 MCAMP43121 646 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 USP5P45974 858 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 WNT7BP56706 349 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 NKX3-2P78367 333 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 DDX10Q13206 875 aaKnown RBP5.94□□□□□ -1.46
SDCBP-207ENST00000520168 PKN1Q16512 942 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 LEXMQ3ZCV2 418 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 TBC1D9Q6ZT07 1266 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 GPIHBP1Q8IV16 184 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 FAM178BQ8IXR5 827 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 MAGEB6Q8N7X4 407 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 ACER1Q8TDN7 264 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 NEUROD6Q96NK8 337 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 UIMC1Q96RL1 719 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 ABHD16BQ9H3Z7 469 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 ARHGEF10LQ9HCE6 1279 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 ADAMTS5Q9UNA0 930 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 ZNF536O15090 1300 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 RALGAPA2Q2PPJ7 1873 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 NLRC5Q86WI3 1866 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 KMT2EQ8IZD2 1858 aa5.94□□□□□ -1.46
SDCBP-207ENST00000520168 MYH4Q9Y623 1939 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 SUPT20HL2P0C7V6 817 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 RABGGTBP53611 331 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 USP46P62068 366 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 TMEM132BQ14DG7 1078 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 GNASQ5JWF2 1037 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 PI16Q6UXB8 463 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 TMEM179Q6ZVK1 233 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 SLC43A3Q8NBI5 491 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 HPS1Q92902 700 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 PRKAG3Q9UGI9 489 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 SAP30BPQ9UHR5 308 aaKnown RBP5.93□□□□□ -1.46
SDCBP-207ENST00000520168 TNKSO95271 1327 aa5.93□□□□□ -1.46
SDCBP-207ENST00000520168 GREB1LQ9C091 1923 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 BAIAP3O94812 1187 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 PGK2P07205 417 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 MYOGP15173 224 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 TAL1P17542 331 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 CDK11BP21127 795 aaKnown RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 SHMT1P34896 483 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 STAT3P40763 770 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 TAP1Q03518 808 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 TFCP2Q12800 502 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 ITGA7Q13683 1181 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 ACVR2BQ13705 512 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 SEPT2Q15019 361 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 CCDC144BQ3MJ40 725 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 ALDH1L2Q3SY69 923 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 CCDC158Q5M9N0 1113 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 TTC39AQ5SRH9 613 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 ADGRA1Q86SQ6 560 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 ARNTL2Q8WYA1 636 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 LENG1Q96BZ8 264 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 ZNF512BQ96KM6 892 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 NOC4LQ9BVI4 516 aaKnown RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 UPF3BQ9BZI7 483 aaKnown RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 IRF2BPLQ9H1B7 796 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 UBE2ZQ9H832 354 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-207ENST00000520168 VCPKMTQ9H867 229 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 SWAP70Q9UH65 585 aa5.92□□□□□ -1.46
SDCBP-207ENST00000520168 ZHX1Q9UKY1 873 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms