RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 MORN1Q5T089 497 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
NUP50-216ENST00000486184 SAMD3Q8N6K7 520 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
NUP50-216ENST00000486184 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 MPHOSPH6Q99547 160 aaKnown RBP13.11□□□□□ -0.31
NUP50-216ENST00000486184 MAF1Q9H063 256 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
NUP50-216ENST00000486184 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 GABRQQ9UN88 632 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 KIF3AQ9Y496 699 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.11□□□□□ -0.31
NUP50-216ENST00000486184 MCM3APO60318 1980 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 GCOM1H8Y6P7 765 aaPredicted RBP13.1□□□□□ -0.31
NUP50-216ENST00000486184 STXBP3O00186 592 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 PGK2P07205 417 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 HSP90AA1P07900 732 aaKnown RBP13.1□□□□□ -0.31
NUP50-216ENST00000486184 POLR2MP0CAP2 368 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 ADCY7P51828 1080 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 BAATQ14032 418 aaPredicted RBP13.1□□□□□ -0.31
NUP50-216ENST00000486184 TRIM29Q14134 588 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 TRMT44Q8IYL2 757 aaKnown RBP13.1□□□□□ -0.31
NUP50-216ENST00000486184 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 CLEC4DQ8WXI8 215 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 SNX21Q969T3 373 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 PSTPIP2Q9H939 334 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
NUP50-216ENST00000486184 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 ADD3Q9UEY8 706 aaKnown RBP13.1□□□□□ -0.31
NUP50-216ENST00000486184 PTPN22Q9Y2R2 807 aa13.1□□□□□ -0.31
NUP50-216ENST00000486184 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 B4DLN1 442 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 ADCY3O60266 1144 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 JAK2O60674 1132 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 CTDNEP1O95476 244 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 GNA11P29992 359 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
NUP50-216ENST00000486184 RPS6P62753 249 aaKnown RBP13.09□□□□□ -0.31
NUP50-216ENST00000486184 CAP1Q01518 475 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 IRF5Q13568 498 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 PKN1Q16512 942 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 ALG1Q9BT22 464 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 VPS54Q9P1Q0 977 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 BIN2Q9UBW5 565 aaPredicted RBP13.09□□□□□ -0.31
NUP50-216ENST00000486184 GJD2Q9UKL4 321 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 PCNTO95613 3336 aa13.09□□□□□ -0.31
NUP50-216ENST00000486184 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 XRCC5P13010 732 aaKnown RBP13.08□□□□□ -0.32
NUP50-216ENST00000486184 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
NUP50-216ENST00000486184 NLRP5P59047 1200 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 ST3GAL1Q11201 340 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 BECN1Q14457 450 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.32
NUP50-216ENST00000486184 FAM177A1Q8N128 213 aaPredicted RBP13.08□□□□□ -0.32
NUP50-216ENST00000486184 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 BICD2Q8TD16 824 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 SMC3Q9UQE7 1217 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 DIS3Q9Y2L1 958 aaKnown RBP13.08□□□□□ -0.32
NUP50-216ENST00000486184 PTCH2Q9Y6C5 1203 aa13.08□□□□□ -0.32
NUP50-216ENST00000486184 ESYT2A0FGR8 921 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 ASB14A6NK59 587 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 SPDYE3A6NKU9 549 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 DTNBO60941 627 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 COBLO75128 1261 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 HOXC6P09630 235 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 GRK4P32298 578 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 HSD17B4P51659 736 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 FOSBP53539 338 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 CNTN2Q02246 1040 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 ZNF792Q3KQV3 632 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 SLC9C1Q4G0N8 1177 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 ARHGEF16Q5VV41 709 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 MFSD14CQ5VZR4 134 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 FCHSD1Q86WN1 690 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 TEX2Q8IWB9 1127 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 NPLOC4Q8TAT6 608 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 PXYLP1Q8TE99 480 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 USP6NLQ92738 828 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 MAML3Q96JK9 1138 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 BRMS1Q9HCU9 246 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 LRRC37A2A6NM11 1700 aa13.07□□□□□ -0.32
NUP50-216ENST00000486184 DNAJC25-GNG10A0A024R161 153 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 PIK3CDO00329 1044 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 OPLAHO14841 1288 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 HMGCRP04035 888 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 ELNP15502 786 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 UBE2SQ16763 222 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 OLFML2BQ68BL8 750 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 MCTP2Q6DN12 878 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 USP17L6PQ6QN14 398 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms