RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MBLAC2Q68D91 279 aa7.19□□□□□ -1.26
LSM5-206ENST00000409987 RSPO2Q6UXX9 243 aaPredicted RBP7.19□□□□□ -1.26
LSM5-206ENST00000409987 ASB11Q8WXH4 323 aa7.19□□□□□ -1.26
LSM5-206ENST00000409987 DIO2Q92813 273 aa7.19□□□□□ -1.26
LSM5-206ENST00000409987 MMP19Q99542 508 aa7.19□□□□□ -1.26
LSM5-206ENST00000409987 GPR27Q9NS67 375 aa7.19□□□□□ -1.26
LSM5-206ENST00000409987 ERVK13-1Q9NX77 482 aa7.19□□□□□ -1.26
LSM5-206ENST00000409987 VAV3Q9UKW4 847 aa7.19□□□□□ -1.26
LSM5-206ENST00000409987 TCRBV16S1A1N1A0A5B0 115 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 PAMP19021 973 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 POU3F3P20264 500 aaPredicted RBP7.18□□□□□ -1.26
LSM5-206ENST00000409987 RPL10P27635 214 aaKnown RBP7.18□□□□□ -1.26
LSM5-206ENST00000409987 GPR85P60893 370 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 KCNAB2Q13303 367 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 INF2Q27J81 1249 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 WAPLQ7Z5K2 1190 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 UBR7Q8N806 425 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 TMEM52Q8NDY8 209 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 CHAC2Q8WUX2 184 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 DDX1Q92499 740 aaKnown RBP7.18□□□□□ -1.26
LSM5-206ENST00000409987 MAGEB10Q96LZ2 347 aaPredicted RBP7.18□□□□□ -1.26
LSM5-206ENST00000409987 ZFYVE21Q9BQ24 234 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 SEMA6BQ9H3T3 888 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 CAAP1Q9H8G2 361 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
LSM5-206ENST00000409987 NPHP3-ACAD11A0A0J9YXS1 232 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 OPA1O60313 960 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 ASLP04424 464 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 ENDOUP21128 410 aaKnown RBP7.17□□□□□ -1.26
LSM5-206ENST00000409987 BNIP3Q12983 259 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 IQCEQ6IPM2 695 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 CPNE8Q86YQ8 564 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 RPUSD2Q8IZ73 545 aaKnown RBP7.17□□□□□ -1.26
LSM5-206ENST00000409987 RCBTB1Q8NDN9 531 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 MISP3Q96FF7 219 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 MAPRE3Q9UPY8 281 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 PCDHA8Q9Y5H6 950 aa7.17□□□□□ -1.26
LSM5-206ENST00000409987 TRBV23OR9-2A0A075B6M9 112 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 IGHA1P01876 353 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 POU3F2P20265 443 aaPredicted RBP7.16□□□□□ -1.26
LSM5-206ENST00000409987 CNGA1P29973 690 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 IGFALSP35858 605 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 ANAPC15P60006 121 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 IKZF1Q13422 519 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 LAPTM5Q13571 262 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 CYP2R1Q6VVX0 501 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 LBX2Q6XYB7 198 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 WFDC3Q8IUB2 231 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 IFNL3Q8IZI9 196 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 NAT16Q8N8M0 369 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.16□□□□□ -1.267e-7■■■□□ 16.2
LSM5-206ENST00000409987 BCL7CQ8WUZ0 217 aaPredicted RBP7.16□□□□□ -1.26
LSM5-206ENST00000409987 FCRL2Q96LA5 508 aaPredicted RBP7.16□□□□□ -1.26
LSM5-206ENST00000409987 G6PC3Q9BUM1 346 aa7.16□□□□□ -1.26
LSM5-206ENST00000409987 CARS2Q9HA77 564 aaKnown RBP7.16□□□□□ -1.26
LSM5-206ENST00000409987 ARVCFO00192 962 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 TBC1D8O95759 1140 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 KCNA6P17658 529 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 SOX5P35711 763 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 PCBP1Q15365 356 aaKnown RBP eCLIP7.15□□□□□ -1.26
LSM5-206ENST00000409987 ABHD17CQ6PCB6 329 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 MTDHQ86UE4 582 aaKnown RBP7.15□□□□□ -1.26
LSM5-206ENST00000409987 JAMLQ86YT9 394 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 PPM1KQ8N3J5 372 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 MTFR1LQ9H019 292 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 BSDC1Q9NW68 430 aaPredicted RBP7.15□□□□□ -1.26
LSM5-206ENST00000409987 EBF1Q9UH73 591 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 FBXL7Q9UJT9 491 aa7.15□□□□□ -1.26
LSM5-206ENST00000409987 C7orf72A4D263 438 aa7.14□□□□□ -1.27
LSM5-206ENST00000409987 JMJD7P0C870 316 aa7.14□□□□□ -1.27
LSM5-206ENST00000409987 ITGB7P26010 798 aa7.14□□□□□ -1.27
LSM5-206ENST00000409987 GRIK1P39086 918 aa7.14□□□□□ -1.27
LSM5-206ENST00000409987 SPRED2Q7Z698 418 aa7.14□□□□□ -1.27
LSM5-206ENST00000409987 POLR3GLQ9BT43 218 aa7.14□□□□□ -1.27
LSM5-206ENST00000409987 PCDHA2Q9Y5H9 948 aa7.14□□□□□ -1.27
LSM5-206ENST00000409987 KPNA6O60684 536 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 MED26O95402 600 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 CD8BP10966 210 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 NAT1P18440 290 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 NEK4P51957 841 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 SEPT7Q16181 437 aaKnown RBP7.13□□□□□ -1.27
LSM5-206ENST00000409987 CT47A1Q5JQC4 288 aaPredicted RBP7.13□□□□□ -1.27
LSM5-206ENST00000409987 CDCA2Q69YH5 1023 aaPredicted RBP7.13□□□□□ -1.27
LSM5-206ENST00000409987 ZCCHC8Q6NZY4 707 aaKnown RBP7.13□□□□□ -1.27
LSM5-206ENST00000409987 PKN3Q6P5Z2 889 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 INTS5Q6P9B9 1019 aaKnown RBP7.13□□□□□ -1.27
LSM5-206ENST00000409987 ZNF574Q6ZN55 896 aaPredicted RBP7.13□□□□□ -1.27
LSM5-206ENST00000409987 STRA8Q7Z7C7 330 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 STK11IPQ8N1F8 1099 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 AFAP1L2Q8N4X5 818 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 PCDH19Q8TAB3 1148 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 LEO1Q8WVC0 666 aaPredicted RBP7.13□□□□□ -1.27
LSM5-206ENST00000409987 LINC01599Q8WXQ3 324 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 DPF3Q92784 378 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 MAP6Q96JE9 813 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 HHIPL1Q96JK4 782 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 LMCD1Q9NZU5 365 aa7.13□□□□□ -1.27
LSM5-206ENST00000409987 PPARGC1AQ9UBK2 798 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms