RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MTMR2Q13614 643 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 NONOQ15233 471 aaKnown RBP eCLIP13.74□□□□□ -0.21
USF1-203ENST00000368021 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 FSIP1Q8NA03 581 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
USF1-203ENST00000368021 ENGASEQ8NFI3 743 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 BRI3BPQ8WY22 251 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
USF1-203ENST00000368021 PSTPIP2Q9H939 334 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 SRPRBQ9Y5M8 271 aaKnown RBP13.74□□□□□ -0.21
USF1-203ENST00000368021 FAM237AA0A1B0GTK4 181 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 C19orf81C9J6K1 198 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 TBC1D8O95759 1140 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 ATP2B1P20020 1258 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 ATP2C1P98194 919 aaPredicted RBP13.73□□□□□ -0.21
USF1-203ENST00000368021 SPP2Q13103 211 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 SNAPC2Q13487 334 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 SNW1Q13573 536 aaKnown RBP13.73□□□□□ -0.21
USF1-203ENST00000368021 HS1BP3Q53T59 392 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 MCTP2Q6DN12 878 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 IFNL1Q8IU54 200 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 C12orf42Q96LP6 360 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 GOLPH3LQ9H4A5 285 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 FBXO2Q9UK22 296 aaPredicted RBP13.73□□□□□ -0.21
USF1-203ENST00000368021 AFG3L2Q9Y4W6 797 aa13.73□□□□□ -0.21
USF1-203ENST00000368021 WNT7AO00755 349 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 VCAM1P19320 739 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 LBX1P52954 281 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 INHBEP58166 350 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 DGKZQ13574 1117 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 INF2Q27J81 1249 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 RESP18Q5W5W9 173 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 ARL6IP4Q66PJ3 421 aaKnown RBP13.72□□□□□ -0.21
USF1-203ENST00000368021 PRPF38AQ8NAV1 312 aaKnown RBP13.72□□□□□ -0.21
USF1-203ENST00000368021 NUP62CLQ9H1M0 184 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 EMILIN3Q9NT22 766 aa13.72□□□□□ -0.21
USF1-203ENST00000368021 SYCE3A1L190 88 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 LAD1O00515 517 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 CETPP11597 493 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 PTGDRQ13258 359 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 ZNF174Q15697 407 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 LRSAM1Q6UWE0 723 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 NEK8Q86SG6 692 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
USF1-203ENST00000368021 FMR1NBQ8N0W7 255 aaPredicted RBP13.71□□□□□ -0.21
USF1-203ENST00000368021 KIFC2Q96AC6 838 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 SLF1Q9BQI6 1058 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 CLSTN2Q9H4D0 955 aa13.71□□□□□ -0.21
USF1-203ENST00000368021 BIN2Q9UBW5 565 aaPredicted RBP13.71□□□□□ -0.21
USF1-203ENST00000368021 A0A1B0GVL5 298 aa13.71□□□□□ -0.22
USF1-203ENST00000368021 KINO60870 393 aaKnown RBP13.71□□□□□ -0.22
USF1-203ENST00000368021 FDX1P10109 184 aa13.71□□□□□ -0.22
USF1-203ENST00000368021 XRCC6P12956 609 aaKnown RBP eCLIP13.71□□□□□ -0.22
USF1-203ENST00000368021 AP3B2Q13367 1082 aa13.71□□□□□ -0.22
USF1-203ENST00000368021 JAKMIP3Q5VZ66 844 aa13.71□□□□□ -0.22
USF1-203ENST00000368021 SHC4Q6S5L8 630 aa13.71□□□□□ -0.22
USF1-203ENST00000368021 RBM43Q6ZSC3 357 aaKnown RBP13.71□□□□□ -0.22
USF1-203ENST00000368021 TBCKQ8TEA7 893 aa13.71□□□□□ -0.22
USF1-203ENST00000368021 R3HDMLQ9H3Y0 253 aa13.71□□□□□ -0.22
USF1-203ENST00000368021 HPSEQ9Y251 543 aa13.71□□□□□ -0.22
USF1-203ENST00000368021 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 BTBD19C9JJ37 291 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 CTAGE5O15320 804 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 MCM7P33993 719 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
USF1-203ENST00000368021 NDUFA8P51970 172 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 DMTNQ08495 405 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 GADL1Q6ZQY3 521 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 C4orf32Q8N8J7 132 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 CLIC6Q96NY7 704 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 FBXO28Q9NVF7 368 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 PNMA2Q9UL42 364 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 KCNH4Q9UQ05 1017 aa13.7□□□□□ -0.22
USF1-203ENST00000368021 TESPA1A2RU30 521 aaPredicted RBP13.69□□□□□ -0.22
USF1-203ENST00000368021 PIK3CDO00329 1044 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 DYNC1I1O14576 645 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 MEIS2O14770 477 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 OFD1O75665 1012 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 PFKFB1P16118 471 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 HMGCS2P54868 508 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 SNAP25P60880 206 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 USH1GQ495M9 461 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 SH3D19Q5HYK7 790 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
USF1-203ENST00000368021 TANGO6Q9C0B7 1094 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 TNMDQ9H2S6 317 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 RPAP3Q9H6T3 665 aaPredicted RBP13.69□□□□□ -0.22
USF1-203ENST00000368021 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 PPP1R9AQ9ULJ8 1098 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 A0A0G2JLL6 359 aaPredicted RBP13.69□□□□□ -0.22
USF1-203ENST00000368021 CXCL11O14625 94 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 CA12O43570 354 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 FOSP01100 380 aaPredicted RBP13.69□□□□□ -0.22
USF1-203ENST00000368021 ICAM1P05362 532 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 HSPA8P11142 646 aaKnown RBP13.69□□□□□ -0.22
USF1-203ENST00000368021 PRPHP41219 470 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 UBE2SQ16763 222 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 PRRT2Q7Z6L0 340 aaPredicted RBP13.69□□□□□ -0.22
USF1-203ENST00000368021 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms