RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 TMEM260Q9NX78 707 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 DCAF8L1A6NGE4 600 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 WNT7AO00755 349 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 MCM7P33993 719 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 MRPL12P52815 198 aaKnown RBP12.18□□□□□ -0.46
CASP3-201ENST00000308394 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.18□□□□□ -0.46
CASP3-201ENST00000308394 KRT25Q7Z3Z0 450 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 CALR3Q96L12 384 aaKnown RBP12.18□□□□□ -0.46
CASP3-201ENST00000308394 RRAGCQ9HB90 399 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 RIC8AQ9NPQ8 531 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 DACT1Q9NYF0 836 aa12.18□□□□□ -0.46
CASP3-201ENST00000308394 NR1I2O75469 434 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 VCAM1P19320 739 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 HMGCS2P54868 508 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 NONOQ15233 471 aaKnown RBP eCLIP12.17□□□□□ -0.46
CASP3-201ENST00000308394 UBE2SQ16763 222 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 NOL9Q5SY16 702 aaKnown RBP12.17□□□□□ -0.46
CASP3-201ENST00000308394 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 CLIC6Q96NY7 704 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.17□□□□□ -0.46
CASP3-201ENST00000308394 A0A1B0GVL5 298 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 SYCE3A1L190 88 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 PLA2G6O60733 806 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 FLOT1O75955 427 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 TAL1P17542 331 aaPredicted RBP12.17□□□□□ -0.46
CASP3-201ENST00000308394 ZFYVE27Q5T4F4 411 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 CCDC183Q5T5S1 534 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 MAP1SQ66K74 1059 aaPredicted RBP12.17□□□□□ -0.46
CASP3-201ENST00000308394 CCDC73Q6ZRK6 1079 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 MOB2Q70IA6 237 aa12.17□□□□□ -0.46
CASP3-201ENST00000308394 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
CASP3-201ENST00000308394 RPAP3Q9H6T3 665 aaPredicted RBP12.17□□□□□ -0.46
CASP3-201ENST00000308394 SCN4AP35499 1836 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 CALRP27797 417 aaKnown RBP12.16□□□□□ -0.46
CASP3-201ENST00000308394 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
CASP3-201ENST00000308394 MRPS27Q92552 414 aaKnown RBP12.16□□□□□ -0.46
CASP3-201ENST00000308394 SLF1Q9BQI6 1058 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 GOLPH3LQ9H4A5 285 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 ZNF408Q9H9D4 720 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 SNCAIPQ9Y6H5 919 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L15C9J2P7 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 C19orf81C9J6K1 198 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L13C9JLJ4 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L11C9JVI0 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L18D6R9N7 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L22D6RA61 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L17D6RBQ6 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L19D6RCP7 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L20D6RJB6 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L24Q0WX57 530 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
CASP3-201ENST00000308394 PTGDRQ13258 359 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 CAMK4Q16566 473 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 LETM2Q2VYF4 491 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 USP17L6PQ6QN14 398 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 TBCKQ8TEA7 893 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
CASP3-201ENST00000308394 ELP3Q9H9T3 547 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 AFG3L2Q9Y4W6 797 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 CEP83Q9Y592 693 aa12.16□□□□□ -0.46
CASP3-201ENST00000308394 A0A1W2PQ27 194 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 A0A1W2PQ64 194 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 A0A1W2PQD8 194 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 BMP15O95972 392 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 MAMSTRQ6ZN01 415 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 CTDP1Q9Y5B0 961 aaPredicted RBP12.15□□□□□ -0.46
CASP3-201ENST00000308394 CCNT1O60563 726 aaKnown RBP12.15□□□□□ -0.46
CASP3-201ENST00000308394 CUTAO60888 179 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 TRAF1Q13077 416 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 SPECC1Q5M775 1068 aa12.15□□□□□ -0.46
CASP3-201ENST00000308394 CMA1P23946 247 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 NDUFA8P51970 172 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
CASP3-201ENST00000308394 GRIN1Q05586 938 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 ARMC9Q7Z3E5 817 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 CPXCR1Q8N123 301 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 CLMNQ96JQ2 1002 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 NUP62CLQ9H1M0 184 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 DDX19AQ9NUU7 478 aaKnown RBP12.14□□□□□ -0.47
CASP3-201ENST00000308394 FBXO2Q9UK22 296 aaPredicted RBP12.14□□□□□ -0.47
CASP3-201ENST00000308394 FRMD4BQ9Y2L6 1034 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 SRPRBQ9Y5M8 271 aaKnown RBP12.14□□□□□ -0.47
CASP3-201ENST00000308394 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 TRAF5O00463 557 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 PTPREP23469 700 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 CLCN1P35523 988 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 CLK2P49760 499 aaKnown RBP12.14□□□□□ -0.47
CASP3-201ENST00000308394 FAM160A1Q05DH4 1040 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 CT47A1Q5JQC4 288 aaPredicted RBP12.14□□□□□ -0.47
CASP3-201ENST00000308394 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
CASP3-201ENST00000308394 KCNV2Q8TDN2 545 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms