RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Sgpl1Q8R0X7 568 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Pcdh18Q8VHR0 1134 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Slc44a4Q91VA1 707 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Chmp3Q9CQ10 224 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Smc1aQ9CU62 1233 aaKnown RBP11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Zcchc8Q9CYA6 709 aaKnown RBP11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Nfe2l3Q9WTM4 660 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Btbd19S4R1I0 287 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 CpdO89001 1377 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Cnbd1B1AWM0 430 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Spata31E9QAF0 1014 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Rc3h2P0C090 1187 aaKnown RBP11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Casp1P29452 402 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 InhbcP55104 352 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Spata18Q0P557 537 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Ankrd53Q3V0J4 497 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Ankrd13bQ5F259 626 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Iws1Q8C1D8 766 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Samd3Q8C4H2 520 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Slc35b4Q8CIA5 331 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Bclaf1Q8K019 919 aaKnown RBP11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Ushbp1Q8R370 680 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Lrrfip2Q91WK0 415 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Sh3bp5lQ99LH9 392 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Chd1lQ9CXF7 900 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Jph2Q9ET78 696 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Cyp11a1Q9QZ82 526 aa11.87□□□□□ -0.51
Trim61-201ENSMUST00000078409 Gm13128L7MU96 475 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 G3bp2P97379 482 aaKnown RBP11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Ces5aQ6AW46 575 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Oxsr1Q6P9R2 527 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 E4f1Q8CCE9 783 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Lin7aQ8JZS0 233 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Cluap1Q8R3P7 413 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Sh2b1Q91ZM2 756 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Ifi35Q9D8C4 286 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Znf287Q9EQB9 759 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Plekho1Q9JIY0 408 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Tsga8Q9JJL0 238 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Cry2Q9R194 592 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 NbnQ9R207 751 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Stat2Q9WVL2 923 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 Plcg1Q62077 1302 aa11.86□□□□□ -0.51
Trim61-201ENSMUST00000078409 March10E9PX79 788 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Phldb3E9QAF4 648 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Zfp607bG3X9H3 648 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Vamp4O70480 141 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 L1camP11627 1260 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Slc30a9Q5IRJ6 567 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 ScinQ60604 715 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Npc1l1Q6T3U4 1333 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Clec4a1Q80UI7 245 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Amer2Q8CCJ4 672 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Map3k20Q9ESL4 802 aaKnown RBP11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Apbb1Q9QXJ1 710 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Myh15E9Q264 1925 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Bcorl1A2AQH4 1781 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Eif3aP23116 1344 aaKnown RBP11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Bin2D3Z6Q9 489 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Triml2E9PW10 424 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Clk4O35493 481 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 GabrdP22933 449 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Chl1P70232 1209 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 E330034G19RikQ3UWX6 351 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Gnat3Q3V3I2 354 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Fam170aQ66LM6 333 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 BegainQ68EF6 600 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Adck2Q6NSR3 617 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 SrlQ7TQ48 910 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 R3hdm2Q80TM6 1044 aaKnown RBP11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Suz12Q80U70 741 aaKnown RBP11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 BlmhQ8R016 455 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Mrpl1Q99N96 336 aaKnown RBP11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Zmat2Q9CPW7 199 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Trmt44Q9D2Q2 713 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Clec4aQ9QZ15 238 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Syt5Q9R0N5 386 aa11.85□□□□□ -0.51
Trim61-201ENSMUST00000078409 Zfp780bE9Q2S6 806 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Anxa1P10107 346 aaKnown RBP11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Pde6bP23440 856 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Psmd7P26516 321 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Cbx2P30658 519 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Ppp1r14bQ62084 147 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Swap70Q6A028 585 aaKnown RBP11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Mapk4Q6P5G0 583 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Smarcc2Q6PDG5 1213 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Jakmip1Q8BVL9 626 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Rab3il1Q8VDV3 383 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Ttc39cQ8VE09 580 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Cdhr1Q8VHP6 859 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Kdm4bQ91VY5 1086 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Syt17Q920M7 470 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Cep89Q9CZX2 791 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Stx12Q9ER00 274 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Kmt2eQ3UG20 1868 aa11.84□□□□□ -0.51
Trim61-201ENSMUST00000078409 Slc27a3O88561 667 aa11.83□□□□□ -0.52
Trim61-201ENSMUST00000078409 Tuba1bP05213 451 aa11.83□□□□□ -0.52
Trim61-201ENSMUST00000078409 Cct8P42932 548 aa11.83□□□□□ -0.52
Trim61-201ENSMUST00000078409 Tuba1aP68369 451 aa11.83□□□□□ -0.52
Trim61-201ENSMUST00000078409 Naf1Q3UMQ8 489 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms