Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Gm25239-201ENSMUST00000174915 86 ntBASIC46.95■■■■■ 5.11
Slc44a4Q91VA1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.5■■■■■ 4.55
Slc44a4Q91VA1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.77■■■■■ 4.44
Slc44a4Q91VA1 Gm15042-201ENSMUST00000120212 883 ntBASIC40.82■■■■■ 4.13
Slc44a4Q91VA1 Gm24109-201ENSMUST00000175489 103 ntBASIC40.8■■■■■ 4.12
Slc44a4Q91VA1 Gm15045-201ENSMUST00000117359 883 ntBASIC39.96■■■■□ 3.99
Slc44a4Q91VA1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.62■■■■□ 3.93
Slc44a4Q91VA1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
Slc44a4Q91VA1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
Slc44a4Q91VA1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
Slc44a4Q91VA1 Gm23366-201ENSMUST00000175022 89 ntBASIC39.1■■■■□ 3.85
Slc44a4Q91VA1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Slc44a4Q91VA1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Slc44a4Q91VA1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.24■■■■□ 3.71
Slc44a4Q91VA1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Slc44a4Q91VA1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.1■■■■□ 3.69
Slc44a4Q91VA1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.86■■■■□ 3.65
Slc44a4Q91VA1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.68■■■■□ 3.62
Slc44a4Q91VA1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.63■■■■□ 3.61
Slc44a4Q91VA1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Slc44a4Q91VA1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Slc44a4Q91VA1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.52■■■■□ 3.6
Slc44a4Q91VA1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.47■■■■□ 3.59
Slc44a4Q91VA1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
Slc44a4Q91VA1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Slc44a4Q91VA1 Gm25238-201ENSMUST00000174914 89 ntBASIC37.15■■■■□ 3.54
Slc44a4Q91VA1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Slc44a4Q91VA1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
Slc44a4Q91VA1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.06■■■■□ 3.52
Slc44a4Q91VA1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Slc44a4Q91VA1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.02■■■■□ 3.52
Slc44a4Q91VA1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.99■■■■□ 3.51
Slc44a4Q91VA1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.73■■■■□ 3.47
Slc44a4Q91VA1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Slc44a4Q91VA1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.59■■■■□ 3.45
Slc44a4Q91VA1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.32■■■■□ 3.4
Slc44a4Q91VA1 Psd-208ENSMUST00000224556 2034 ntBASIC36.32■■■■□ 3.4
Slc44a4Q91VA1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.28■■■■□ 3.4
Slc44a4Q91VA1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Slc44a4Q91VA1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.04■■■■□ 3.36
Slc44a4Q91VA1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Slc44a4Q91VA1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.94■■■■□ 3.34
Slc44a4Q91VA1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.85■■■■□ 3.33
Slc44a4Q91VA1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.82■■■■□ 3.32
Slc44a4Q91VA1 Gm27325-201ENSMUST00000175467 74 ntBASIC35.76■■■■□ 3.32
Slc44a4Q91VA1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Slc44a4Q91VA1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.66■■■■□ 3.3
Slc44a4Q91VA1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.59■■■■□ 3.29
Slc44a4Q91VA1 Gm25262-201ENSMUST00000174934 133 ntBASIC35.54■■■■□ 3.28
Slc44a4Q91VA1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Slc44a4Q91VA1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Slc44a4Q91VA1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Slc44a4Q91VA1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.21■■■■□ 3.23
Slc44a4Q91VA1 Rab21-202ENSMUST00000218831 843 ntBASIC35.18■■■■□ 3.22
Slc44a4Q91VA1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.16■■■■□ 3.22
Slc44a4Q91VA1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
Slc44a4Q91VA1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Slc44a4Q91VA1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.14■■■■□ 3.22
Slc44a4Q91VA1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.09■■■■□ 3.21
Slc44a4Q91VA1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.19
Slc44a4Q91VA1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Slc44a4Q91VA1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.95■■■■□ 3.19
Slc44a4Q91VA1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Slc44a4Q91VA1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.89■■■■□ 3.18
Slc44a4Q91VA1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.88■■■■□ 3.17
Slc44a4Q91VA1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
Slc44a4Q91VA1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Slc44a4Q91VA1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Slc44a4Q91VA1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Slc44a4Q91VA1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.75■■■■□ 3.15
Slc44a4Q91VA1 Gm26115-201ENSMUST00000175605 87 ntBASIC34.71■■■■□ 3.15
Slc44a4Q91VA1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.67■■■■□ 3.14
Slc44a4Q91VA1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
Slc44a4Q91VA1 Gm8109-201ENSMUST00000194076 746 ntBASIC34.59■■■■□ 3.13
Slc44a4Q91VA1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Slc44a4Q91VA1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Slc44a4Q91VA1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Slc44a4Q91VA1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Slc44a4Q91VA1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Slc44a4Q91VA1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Slc44a4Q91VA1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
Slc44a4Q91VA1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
Slc44a4Q91VA1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
Slc44a4Q91VA1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.39■■■■□ 3.1
Slc44a4Q91VA1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Slc44a4Q91VA1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.32■■■■□ 3.08
Slc44a4Q91VA1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.28■■■■□ 3.08
Slc44a4Q91VA1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Slc44a4Q91VA1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.24■■■■□ 3.07
Slc44a4Q91VA1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Slc44a4Q91VA1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Slc44a4Q91VA1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Slc44a4Q91VA1 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.08■■■■□ 3.05
Slc44a4Q91VA1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
Slc44a4Q91VA1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.04
Slc44a4Q91VA1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.04■■■■□ 3.04
Slc44a4Q91VA1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Slc44a4Q91VA1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34■■■■□ 3.03
Slc44a4Q91VA1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Slc44a4Q91VA1 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.98■■■■□ 3.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms