RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Gm35339A0A140LHH9 1649 aa22.9■■□□□ 1.26
Trim61-201ENSMUST00000078409 NischQ80TM9 1593 aa22.25■■□□□ 1.15
Trim61-201ENSMUST00000078409 Abcc9P70170 1546 aa21.77■■□□□ 1.08
Trim61-201ENSMUST00000078409 Abcc8B2RUS7 1588 aa21.69■■□□□ 1.06
Trim61-201ENSMUST00000078409 ScribQ80U72 1612 aa21.29■■□□□ 1
Trim61-201ENSMUST00000078409 NacadQ5SWP3 1504 aa20.5■□□□□ 0.87
Trim61-201ENSMUST00000078409 Kdm5dQ62240 1548 aa20.42■□□□□ 0.86
Trim61-201ENSMUST00000078409 Sycp2Q9CUU3 1500 aa20.14■□□□□ 0.81
Trim61-201ENSMUST00000078409 Dnajc5bQ9CQ94 199 aa20.14■□□□□ 0.81
Trim61-201ENSMUST00000078409 BicraF8VPZ9 1578 aa19.97■□□□□ 0.79
Trim61-201ENSMUST00000078409 Dcaf1Q80TR8 1506 aa19.9■□□□□ 0.78
Trim61-201ENSMUST00000078409 Thoc2B1AZI6 1594 aaKnown RBP19.61■□□□□ 0.73
Trim61-201ENSMUST00000078409 Pds5bQ4VA53 1446 aaKnown RBP19.49■□□□□ 0.71
Trim61-201ENSMUST00000078409 Rb1cc1Q9ESK9 1588 aa19.36■□□□□ 0.69
Trim61-201ENSMUST00000078409 Cc2d2aQ8CFW7 1633 aa19.22■□□□□ 0.67
Trim61-201ENSMUST00000078409 Atad2bE9Q166 1460 aaKnown RBP19.2■□□□□ 0.66
Trim61-201ENSMUST00000078409 Crybg2B7ZCC2 1516 aa19.07■□□□□ 0.64
Trim61-201ENSMUST00000078409 Ercc6F8VPZ5 1481 aa19.07■□□□□ 0.64
Trim61-201ENSMUST00000078409 Ccdc180J3QNE4 1664 aa19.05■□□□□ 0.64
Trim61-201ENSMUST00000078409 Baz1aO88379 1555 aa19.04■□□□□ 0.64
Trim61-201ENSMUST00000078409 Fam135aQ6NS59 1506 aa19.04■□□□□ 0.64
Trim61-201ENSMUST00000078409 Smarca2Q6DIC0 1577 aa18.92■□□□□ 0.62
Trim61-201ENSMUST00000078409 Baz1bQ9Z277 1479 aa18.86■□□□□ 0.61
Trim61-201ENSMUST00000078409 Dnajc5P60904 198 aa18.84■□□□□ 0.61
Trim61-201ENSMUST00000078409 Smarca4Q3TKT4 1613 aaKnown RBP18.84■□□□□ 0.61
Trim61-201ENSMUST00000078409 Iqgap2Q3UQ44 1575 aa18.81■□□□□ 0.6
Trim61-201ENSMUST00000078409 Zcchc6Q5BLK4 1491 aaKnown RBP18.79■□□□□ 0.6
Trim61-201ENSMUST00000078409 Wdr62Q3U3T8 1523 aa18.75■□□□□ 0.59
Trim61-201ENSMUST00000078409 Phldb1Q6PDH0 1371 aaKnown RBP18.71■□□□□ 0.59
Trim61-201ENSMUST00000078409 Frmpd1A2AKB4 1549 aa18.7■□□□□ 0.58
Trim61-201ENSMUST00000078409 Cecr2E9Q2Z1 1453 aa18.55■□□□□ 0.56
Trim61-201ENSMUST00000078409 Mrc2Q64449 1479 aa18.55■□□□□ 0.56
Trim61-201ENSMUST00000078409 Rhox8Q6VSS7 320 aa18.5■□□□□ 0.55
Trim61-201ENSMUST00000078409 Ubl4bQ9CQ84 188 aa18.49■□□□□ 0.55
Trim61-201ENSMUST00000078409 Unc13aQ4KUS2 1712 aa18.49■□□□□ 0.55
Trim61-201ENSMUST00000078409 Trim41Q5NCC3 630 aa18.43■□□□□ 0.54
Trim61-201ENSMUST00000078409 DiexfQ8BTT6 772 aaKnown RBP18.33■□□□□ 0.52
Trim61-201ENSMUST00000078409 Lrriq1Q0P5X1 1673 aa18.22■□□□□ 0.51
Trim61-201ENSMUST00000078409 Myt1Q8CFC2 1127 aa18.18■□□□□ 0.5
Trim61-201ENSMUST00000078409 Rsf1E9PWW9 1441 aaKnown RBP18.13■□□□□ 0.49
Trim61-201ENSMUST00000078409 Cttnbp2B9EJA2 1648 aa18.1■□□□□ 0.49
Trim61-201ENSMUST00000078409 Shroom2A2ALU4 1481 aa18.06■□□□□ 0.48
Trim61-201ENSMUST00000078409 CftrP26361 1476 aa18.05■□□□□ 0.48
Trim61-201ENSMUST00000078409 Rpgrip1Q9EPQ2 1331 aa18.03■□□□□ 0.48
Trim61-201ENSMUST00000078409 Kif21aQ9QXL2 1672 aa17.98■□□□□ 0.47
Trim61-201ENSMUST00000078409 Eif4g3Q80XI3 1579 aaKnown RBP17.97■□□□□ 0.47
Trim61-201ENSMUST00000078409 Synj1Q8CHC4 1574 aa17.97■□□□□ 0.47
Trim61-201ENSMUST00000078409 Cux2P70298 1426 aa17.92■□□□□ 0.46
Trim61-201ENSMUST00000078409 Col17a1Q07563 1470 aa17.9■□□□□ 0.46
Trim61-201ENSMUST00000078409 Brd4Q9ESU6 1400 aaKnown RBP17.83■□□□□ 0.45
Trim61-201ENSMUST00000078409 Kif15Q6P9L6 1387 aa17.79■□□□□ 0.44
Trim61-201ENSMUST00000078409 Top2bQ64511 1612 aa17.74■□□□□ 0.43
Trim61-201ENSMUST00000078409 CatipB9EKE5 520 aa17.71■□□□□ 0.43
Trim61-201ENSMUST00000078409 Pcgf6Q99NA9 353 aa17.71■□□□□ 0.43
Trim61-201ENSMUST00000078409 Lamc3Q9R0B6 1581 aa17.7■□□□□ 0.42
Trim61-201ENSMUST00000078409 Rtl1Q7M732 1744 aa17.69■□□□□ 0.42
Trim61-201ENSMUST00000078409 Pabpn1Q8CCS6 302 aaKnown RBP17.67■□□□□ 0.42
Trim61-201ENSMUST00000078409 Amer1Q7TS75 1132 aa17.66■□□□□ 0.42
Trim61-201ENSMUST00000078409 Urb2E9Q7L1 1524 aaKnown RBP17.64■□□□□ 0.42
Trim61-201ENSMUST00000078409 Npm1Q61937 292 aaKnown RBP17.64■□□□□ 0.41
Trim61-201ENSMUST00000078409 Zcchc11B2RX14 1644 aaKnown RBP17.62■□□□□ 0.41
Trim61-201ENSMUST00000078409 Cep164Q5DU05 1446 aa17.6■□□□□ 0.41
Trim61-201ENSMUST00000078409 CenpbP27790 599 aa17.57■□□□□ 0.4
Trim61-201ENSMUST00000078409 Esf1Q3V1V3 845 aaKnown RBP17.57■□□□□ 0.4
Trim61-201ENSMUST00000078409 Plb1Q3TTY0 1478 aa17.57■□□□□ 0.4
Trim61-201ENSMUST00000078409 Dhx29Q6PGC1 1365 aaKnown RBP17.5■□□□□ 0.39
Trim61-201ENSMUST00000078409 Rusc2Q80U22 1514 aa17.5■□□□□ 0.39
Trim61-201ENSMUST00000078409 Crocc2F6XLV1 1638 aa17.46■□□□□ 0.39
Trim61-201ENSMUST00000078409 Pelp1Q9DBD5 1123 aaKnown RBP17.45■□□□□ 0.38
Trim61-201ENSMUST00000078409 Bcl11aQ9QYE3 773 aa17.41■□□□□ 0.38
Trim61-201ENSMUST00000078409 Ift140E9PY46 1464 aa17.41■□□□□ 0.38
Trim61-201ENSMUST00000078409 Ccdc136Q3TVA9 1136 aa17.4■□□□□ 0.38
Trim61-201ENSMUST00000078409 Ccdc18Q640L5 1455 aa17.39■□□□□ 0.37
Trim61-201ENSMUST00000078409 Arhgef5E9Q7D5 1581 aa17.38■□□□□ 0.37
Trim61-201ENSMUST00000078409 Ube2uB1AUC4 352 aa17.38■□□□□ 0.37
Trim61-201ENSMUST00000078409 LrpprcQ6PB66 1392 aaKnown RBP17.38■□□□□ 0.37
Trim61-201ENSMUST00000078409 TnnQ80Z71 1560 aa17.35■□□□□ 0.37
Trim61-201ENSMUST00000078409 Pcdh10E9PXQ7 1057 aa17.33■□□□□ 0.37
Trim61-201ENSMUST00000078409 Camsap1A2AHC3 1581 aa17.3■□□□□ 0.36
Trim61-201ENSMUST00000078409 Las1lA2BE28 776 aaKnown RBP17.29■□□□□ 0.36
Trim61-201ENSMUST00000078409 Adgrl3Q80TS3 1537 aa17.28■□□□□ 0.36
Trim61-201ENSMUST00000078409 Il27Q8K3I6 234 aa17.26■□□□□ 0.35
Trim61-201ENSMUST00000078409 PogzQ8BZH4 1409 aaKnown RBP17.25■□□□□ 0.35
Trim61-201ENSMUST00000078409 Pbrm1Q8BSQ9 1634 aaKnown RBP17.18■□□□□ 0.34
Trim61-201ENSMUST00000078409 Disp1Q3TDN0 1521 aa17.18■□□□□ 0.34
Trim61-201ENSMUST00000078409 Cep170Q6A065 1588 aa17.17■□□□□ 0.34
Trim61-201ENSMUST00000078409 Setd1bQ8CFT2 1985 aa17.17■□□□□ 0.34
Trim61-201ENSMUST00000078409 PtprkP35822 1457 aa17.16■□□□□ 0.34
Trim61-201ENSMUST00000078409 Golga3P55937 1487 aa17.15■□□□□ 0.34
Trim61-201ENSMUST00000078409 Nup160Q9Z0W3 1402 aaKnown RBP17.14■□□□□ 0.33
Trim61-201ENSMUST00000078409 Duox2A2AQ99 1517 aa17.14■□□□□ 0.33
Trim61-201ENSMUST00000078409 Ttbk1Q6PCN3 1308 aa17.14■□□□□ 0.33
Trim61-201ENSMUST00000078409 Cc2d2bA0A286YDU8 1405 aa17.14■□□□□ 0.33
Trim61-201ENSMUST00000078409 PtprtQ99M80 1454 aa17.14■□□□□ 0.33
Trim61-201ENSMUST00000078409 Gapvd1Q6PAR5 1458 aa17.1■□□□□ 0.33
Trim61-201ENSMUST00000078409 Gm156Q58A37 223 aa17.08■□□□□ 0.33
Trim61-201ENSMUST00000078409 Samd9lQ69Z37 1561 aa17.04■□□□□ 0.32
Trim61-201ENSMUST00000078409 Fgd6Q69ZL1 1399 aa17.03■□□□□ 0.32
Trim61-201ENSMUST00000078409 Pprc1Q6NZN1 1644 aa17■□□□□ 0.31
Trim61-201ENSMUST00000078409 AqrQ8CFQ3 1481 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms