Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Gm25239-201ENSMUST00000174915 86 ntBASIC39.46■■■■□ 3.91
Rc3h2P0C090 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
Rc3h2P0C090 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Rc3h2P0C090 Gm15042-201ENSMUST00000120212 883 ntBASIC34.47■■■■□ 3.11
Rc3h2P0C090 Gm24109-201ENSMUST00000175489 103 ntBASIC34.18■■■■□ 3.06
Rc3h2P0C090 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Rc3h2P0C090 Gm15045-201ENSMUST00000117359 883 ntBASIC33.72■■■□□ 2.99
Rc3h2P0C090 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Rc3h2P0C090 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
Rc3h2P0C090 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Rc3h2P0C090 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Rc3h2P0C090 Gm23366-201ENSMUST00000175022 89 ntBASIC32.96■■■□□ 2.87
Rc3h2P0C090 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Rc3h2P0C090 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
Rc3h2P0C090 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Rc3h2P0C090 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rc3h2P0C090 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.89■■■□□ 2.7
Rc3h2P0C090 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.88■■■□□ 2.69
Rc3h2P0C090 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
Rc3h2P0C090 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Rc3h2P0C090 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rc3h2P0C090 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.66■■■□□ 2.66
Rc3h2P0C090 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.53■■■□□ 2.64
Rc3h2P0C090 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rc3h2P0C090 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Rc3h2P0C090 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rc3h2P0C090 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rc3h2P0C090 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rc3h2P0C090 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rc3h2P0C090 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rc3h2P0C090 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rc3h2P0C090 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.24■■■□□ 2.59
Rc3h2P0C090 Gm25238-201ENSMUST00000174914 89 ntBASIC31.16■■■□□ 2.58
Rc3h2P0C090 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.13■■■□□ 2.57
Rc3h2P0C090 Psd-208ENSMUST00000224556 2034 ntBASIC31.09■■■□□ 2.57
Rc3h2P0C090 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rc3h2P0C090 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rc3h2P0C090 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.66■■■□□ 2.5
Rc3h2P0C090 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
Rc3h2P0C090 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rc3h2P0C090 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.4■■■□□ 2.46
Rc3h2P0C090 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rc3h2P0C090 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rc3h2P0C090 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Rc3h2P0C090 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Rc3h2P0C090 Gm27325-201ENSMUST00000175467 74 ntBASIC30.24■■■□□ 2.43
Rc3h2P0C090 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.21■■■□□ 2.43
Rc3h2P0C090 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Rc3h2P0C090 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
Rc3h2P0C090 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.1■■■□□ 2.41
Rc3h2P0C090 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.04■■■□□ 2.4
Rc3h2P0C090 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Rc3h2P0C090 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rc3h2P0C090 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.85■■■□□ 2.37
Rc3h2P0C090 Gm25262-201ENSMUST00000174934 133 ntBASIC29.84■■■□□ 2.37
Rc3h2P0C090 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Rc3h2P0C090 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.8■■■□□ 2.36
Rc3h2P0C090 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rc3h2P0C090 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Rc3h2P0C090 Rab21-202ENSMUST00000218831 843 ntBASIC29.67■■■□□ 2.34
Rc3h2P0C090 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.58■■■□□ 2.33
Rc3h2P0C090 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rc3h2P0C090 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.54■■■□□ 2.32
Rc3h2P0C090 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Rc3h2P0C090 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Rc3h2P0C090 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rc3h2P0C090 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rc3h2P0C090 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Rc3h2P0C090 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.37■■■□□ 2.29
Rc3h2P0C090 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.37■■■□□ 2.29
Rc3h2P0C090 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Rc3h2P0C090 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Rc3h2P0C090 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rc3h2P0C090 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rc3h2P0C090 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rc3h2P0C090 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.26■■■□□ 2.27
Rc3h2P0C090 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Rc3h2P0C090 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.24■■■□□ 2.27
Rc3h2P0C090 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
Rc3h2P0C090 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.21■■■□□ 2.27
Rc3h2P0C090 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rc3h2P0C090 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rc3h2P0C090 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rc3h2P0C090 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rc3h2P0C090 Gm26115-201ENSMUST00000175605 87 ntBASIC29.1■■■□□ 2.25
Rc3h2P0C090 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rc3h2P0C090 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Rc3h2P0C090 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rc3h2P0C090 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rc3h2P0C090 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29■■■□□ 2.23
Rc3h2P0C090 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rc3h2P0C090 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.96■■■□□ 2.23
Rc3h2P0C090 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Rc3h2P0C090 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rc3h2P0C090 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.92■■■□□ 2.22
Rc3h2P0C090 Gm8109-201ENSMUST00000194076 746 ntBASIC28.91■■■□□ 2.22
Rc3h2P0C090 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.91■■■□□ 2.22
Rc3h2P0C090 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Rc3h2P0C090 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Rc3h2P0C090 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms